Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 21 175 NP_055144 17 3301 NP_000220 17 4312 NP_848537 16 5631 NP_113659 16 5631 NP_001037835 16 5631 NP_942581 16 5631 NP_060200 16 5631 XP_006718768 16 5631 XP_006718767 16 5631 XP_006718766 16 5631 XP_006713275 16 5631 XP_005265305 16 5631 NP_940967 16 7355 NP_689931 15 9605 NP_653302 15 9605 NP_085130 15 9605 NP_005556 15 9605 NP_116216 15 9605 NP_473357 15 9605 NP_001177934 15 9605 NP_536354 15 9605 NP_001172014 15 9605 NP_001667 15 9605 XP_006718526 15 9605 XP_005273893 15 9605 XP_006718525 15 9605 XP_006718524 15 9605 XP_006718523 15 9605 XP_005266053 15 9605 XP_005266052 15 9605 XP_005266051 15 9605 XP_006712185 15 9605 XP_005264680 15 9605 XP_006712184 15 9605 XP_005270574 15 9605 XP_005270573 15 9605 XP_005270569 15 9605 XP_006710363 15 9605 XP_006710361 15 9605>NP_004295 Length = 1620 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HMNMAFSQS 9 H+NMAFSQS Sbjct: 1475 HVNMAFSQS 1483>NP_055144 Length = 1401 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMNMAFSQS 9 H+N AF Q+ Sbjct: 1276 HLNQAFQQA 1284>NP_000220 Length = 440 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HMNMAFS 7 H+NM FS Sbjct: 401 HLNMVFS 407>NP_848537 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HMNMAFS 7 H+N+AFS Sbjct: 616 HINVAFS 622>NP_113659 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HMNMAFS 7 H+N+AFS Sbjct: 612 HINVAFS 618>NP_001037835 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MNMAFSQS 9 + MAFSQS Sbjct: 23 LGMAFSQS 30>NP_942581 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 HM +AFS+ Sbjct: 642 HMKLAFSK 649>NP_060200 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 HM +AFS+ Sbjct: 642 HMKLAFSK 649>XP_006718768 Length = 483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HMNMAFS 7 H+N+AFS Sbjct: 432 HINVAFS 438>XP_006718767 Length = 616 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HMNMAFS 7 H+N+AFS Sbjct: 565 HINVAFS 571>XP_006718766 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HMNMAFS 7 H+N+AFS Sbjct: 612 HINVAFS 618>XP_006713275 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 HM +AFS+ Sbjct: 642 HMKLAFSK 649>XP_005265305 Length = 776 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 HM +AFS+ Sbjct: 642 HMKLAFSK 649>NP_940967 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HMNMAFS 7 H+N+AF+ Sbjct: 209 HLNLAFN 215>NP_689931 Length = 955 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMNMAFSQS 9 H N+AFS++ Sbjct: 758 HGNVAFSKA 766>NP_653302 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HMNMAFSQS 9 H N AFS S Sbjct: 527 HPNFAFSVS 535>NP_085130 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HMNMAFSQ 8 H N AF+Q Sbjct: 263 HRNAAFNQ 270>NP_005556 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HMNMAFSQS 9 HM AFS+S Sbjct: 359 HMPGAFSES 367>NP_116216 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 H N++FS+ Sbjct: 294 HSNLSFSE 301>NP_473357 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMNMAFSQS 9 H N +FS+S Sbjct: 167 HRNRSFSRS 175>NP_001177934 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMNMAFSQS 9 H N +FS+S Sbjct: 166 HRNRSFSRS 174>NP_536354 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HMNMAFS 7 H+N AFS Sbjct: 80 HLNPAFS 86>NP_001172014 Length = 1045 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 HMNMAFSQS 9 H N F QS Sbjct: 427 HSNQVFDQS 435>NP_001667 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 HMNMAFSQS 9 H N F QS Sbjct: 421 HSNQVFDQS 429>XP_006718526 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMNMAFSQS 9 H N+AFS++ Sbjct: 475 HGNVAFSKA 483>XP_005273893 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMNMAFSQS 9 H N+AFS++ Sbjct: 628 HGNVAFSKA 636>XP_006718525 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMNMAFSQS 9 H N+AFS++ Sbjct: 698 HGNVAFSKA 706>XP_006718524 Length = 912 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMNMAFSQS 9 H N+AFS++ Sbjct: 715 HGNVAFSKA 723>XP_006718523 Length = 947 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMNMAFSQS 9 H N+AFS++ Sbjct: 750 HGNVAFSKA 758>XP_005266053 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HMNMAFSQ 8 H N AF+Q Sbjct: 263 HRNAAFNQ 270>XP_005266052 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HMNMAFSQ 8 H N AF+Q Sbjct: 263 HRNAAFNQ 270>XP_005266051 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HMNMAFSQ 8 H N AF+Q Sbjct: 263 HRNAAFNQ 270>XP_006712185 Length = 327 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 H N++FS+ Sbjct: 294 HSNLSFSE 301>XP_005264680 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 H N++FS+ Sbjct: 294 HSNLSFSE 301>XP_006712184 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HMNMAFSQ 8 H N++FS+ Sbjct: 294 HSNLSFSE 301>XP_005270574 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HMNMAFSQS 9 H N AFS S Sbjct: 272 HPNFAFSVS 280>XP_005270573 Length = 375 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HMNMAFSQS 9 H N AFS S Sbjct: 273 HPNFAFSVS 281>XP_005270569 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HMNMAFSQS 9 H N AFS S Sbjct: 324 HPNFAFSVS 332>XP_006710363 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMNMAFSQS 9 H N +FS+S Sbjct: 72 HRNRSFSRS 80>XP_006710361 Length = 214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMNMAFSQS 9 H N +FS+S Sbjct: 119 HRNRSFSRS 127Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.112 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 330,700 Number of extensions: 423 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |