Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1135 XP_005271621 18 1135 XP_006718907 18 1135 XP_006718906 18 1135 XP_005271619 18 1135 XP_005271618 18 1135 NP_057006 16 7355 NP_001123237 16 7355 NP_001129735 16 7355 XP_006724887 16 7355 XP_006722712 16 7355 NP_065813 15 9605 NP_536347 15 9605 NP_055665 15 9605 NP_001193942 15 9605 NP_001028289 15 9605 NP_002819 15 9605 NP_536348 15 9605 NP_003095 15 9605 XP_005258184 15 9605 XP_005258183 15 9605 XP_005258182 15 9605 XP_005258181 15 9605 XP_005269099 15 9605 XP_005265679 15 9605>NP_000042 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLAAESIN Sbjct: 1087 MLAAESIN 1094>XP_005271621 Length = 2708 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLAAESIN Sbjct: 739 MLAAESIN 746>XP_006718907 Length = 3050 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLAAESIN Sbjct: 1081 MLAAESIN 1088>XP_006718906 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLAAESIN Sbjct: 1087 MLAAESIN 1094>XP_005271619 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLAAESIN Sbjct: 1087 MLAAESIN 1094>XP_005271618 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLAAESIN Sbjct: 1087 MLAAESIN 1094>NP_057006 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMLAAESIN 9 H+LAAE ++ Sbjct: 247 HILAAEQLS 255>NP_001123237 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMLAAESIN 9 H+LAAE ++ Sbjct: 247 HILAAEQLS 255>NP_001129735 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HMLAAESI 8 H+LAAE + Sbjct: 325 HLLAAEGL 332>XP_006724887 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HMLAAESIN 9 H+LAAE ++ Sbjct: 247 HILAAEQLS 255>XP_006722712 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HMLAAESI 8 H+LAAE + Sbjct: 325 HLLAAEGL 332>NP_065813 Length = 1085 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 HM AESI+ Sbjct: 169 HMYHAESIS 177>NP_536347 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 157 HLLQLENIN 165>NP_055665 Length = 1099 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 HM AESI+ Sbjct: 168 HMYHAESIS 176>NP_001193942 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 157 HLLQLENIN 165>NP_001028289 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 HM AESI+ Sbjct: 168 HMYHAESIS 176>NP_002819 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 157 HLLQLENIN 165>NP_536348 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 157 HLLQLENIN 165>NP_003095 Length = 357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MLAAESIN 9 MLA++S+N Sbjct: 310 MLASKSVN 317>XP_005258184 Length = 386 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 128 HLLQLENIN 136>XP_005258183 Length = 409 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 128 HLLQLENIN 136>XP_005258182 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 157 HLLQLENIN 165>XP_005258181 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 H+L E+IN Sbjct: 157 HLLQLENIN 165>XP_005269099 Length = 1062 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 HM AESI+ Sbjct: 169 HMYHAESIS 177>XP_005265679 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HMLAAESIN 9 HM AESI+ Sbjct: 168 HMYHAESIS 176Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.118 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 281,721 Number of extensions: 284 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |