Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115830 18 1135 NP_004188 18 1135 XP_006716428 17 2528 NP_001191195 17 3301 NP_001191196 17 3301 NP_000800 17 3301 NP_001174 17 3301 NP_000578 17 3301 XP_006714066 17 3301 NP_775960 17 4312 NP_006321 17 4312 NP_001266288 17 4312 NP_001266287 17 4312 NP_001266286 17 4312 NP_001266285 17 4312 NP_001009562 17 4312 NP_001266289 17 4312 XP_005251991 17 4312 XP_005251184 17 4312 XP_006716480 17 4312 NP_036499 17 4312 NP_036425 16 5631 NP_004652 16 5631 NP_002340 16 5631 NP_001185688 16 5631 NP_001185689 16 5631 XP_005255923 16 5631 XP_006711959 16 5631 XP_005264764 16 5631 NP_056066 16 5631 NP_001277197 16 7355 NP_543019 16 7355 NP_002204 16 7355 NP_079101 16 7355 NP_001139726 16 7355 NP_009191 16 7355 XP_006723776 16 7355 XP_005260351 16 7355 XP_005258760 16 7355 XP_006722964 16 7355 XP_005272075 16 7355 XP_006713693 16 7355 XP_005247493 16 7355 XP_005245785 16 7355 NP_057688 16 7355 NP_003649 16 7355 NP_004317 15 9605 NP_689914 15 9605 NP_055521 15 9605 NP_848695 15 9605 NP_001258791 15 9605 NP_056261 15 9605 NP_849188 15 9605 NP_848696 15 9605 NP_775787 15 9605 NP_612385 15 9605 NP_848697 15 9605 NP_110416 15 9605 NP_004648 15 9605 XP_005260619 15 9605 XP_005269298 15 9605 XP_006711822 15 9605 XP_006711821 15 9605 XP_005277475 15 9605 XP_005277474 15 9605 XP_006711546 15 9605 XP_005273028 15 9605>NP_115830 Length = 368 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 HL+P TFG Sbjct: 117 HLIPETFG 124>NP_004188 Length = 364 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 HL+P TFG Sbjct: 117 HLIPETFG 124>XP_006716428 Length = 362 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HLVPLTF 7 HL PLTF Sbjct: 17 HLFPLTF 23>NP_001191195 Length = 535 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L P+TFGA Sbjct: 506 LFPVTFGA 513>NP_001191196 Length = 484 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L P+TFGA Sbjct: 455 LFPVTFGA 462>NP_000800 Length = 554 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L P+TFGA Sbjct: 525 LFPVTFGA 532>NP_001174 Length = 470 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 L PLTFG Sbjct: 285 LTPLTFG 291>NP_000578 Length = 843 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HLVPLTFGA 9 H P TFGA Sbjct: 476 HCKPYTFGA 484>XP_006714066 Length = 544 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L P+TFGA Sbjct: 515 LFPVTFGA 522>NP_775960 Length = 1285 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 HLV L+FG Sbjct: 727 HLVMLSFG 734>NP_006321 Length = 230 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 176 LVPLMFGS 183>NP_001266288 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 127 LVPLMFGS 134>NP_001266287 Length = 216 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 162 LVPLMFGS 169>NP_001266286 Length = 214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 160 LVPLMFGS 167>NP_001266285 Length = 196 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 142 LVPLMFGS 149>NP_001009562 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVP+ FGA Sbjct: 539 LVPIYFGA 546>NP_001266289 Length = 166 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 112 LVPLMFGS 119>XP_005251991 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 HLV L+FG Sbjct: 395 HLVMLSFG 402>XP_005251184 Length = 181 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 127 LVPLMFGS 134>XP_006716480 Length = 208 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 LVPL FG+ Sbjct: 154 LVPLMFGS 161>NP_036499 Length = 313 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLVPLT 6 HL+PLT Sbjct: 207 HLIPLT 212>NP_036425 Length = 1479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HLVPLTF 7 HLVP TF Sbjct: 172 HLVPGTF 178>NP_004652 Length = 597 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HLVPLTFGA 9 H++PL +GA Sbjct: 197 HVLPLHWGA 205>NP_002340 Length = 1722 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 H P+TFG Sbjct: 894 HRFPVTFG 901>NP_001185688 Length = 1873 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 H P+TFG Sbjct: 894 HRFPVTFG 901>NP_001185689 Length = 1817 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 H P+TFG Sbjct: 894 HRFPVTFG 901>XP_005255923 Length = 667 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 HL+PL+ G Sbjct: 186 HLMPLSVG 193>XP_006711959 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HLVPLTF 7 HLVP TF Sbjct: 172 HLVPGTF 178>XP_005264764 Length = 1455 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HLVPLTF 7 HLVP TF Sbjct: 148 HLVPGTF 154>NP_056066 Length = 823 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 HL+PL+ G Sbjct: 342 HLMPLSVG 349>NP_001277197 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VPLTFG 8 +PLTFG Sbjct: 432 LPLTFG 437>NP_543019 Length = 946 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VPLTFG 8 +PLTFG Sbjct: 428 LPLTFG 433>NP_002204 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLVPLT 6 HL+PLT Sbjct: 219 HLLPLT 224>NP_079101 Length = 512 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 + PLTFG Sbjct: 160 IFPLTFG 166>NP_001139726 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 + PLTFG Sbjct: 158 IFPLTFG 164>NP_009191 Length = 231 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 +VP+ FGA Sbjct: 178 MVPVRFGA 185>XP_006723776 Length = 945 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VPLTFG 8 +PLTFG Sbjct: 427 LPLTFG 432>XP_005260351 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VPLTFG 8 +PLTFG Sbjct: 432 LPLTFG 437>XP_005258760 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLVPLT 6 HL+PLT Sbjct: 32 HLLPLT 37>XP_006722964 Length = 581 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 + PLTFG Sbjct: 160 IFPLTFG 166>XP_005272075 Length = 1561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PLTFGA 9 PLTFG+ Sbjct: 282 PLTFGS 287>XP_006713693 Length = 754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLVPLT 6 HL+PLT Sbjct: 219 HLLPLT 224>XP_005247493 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLVPLT 6 HL+PLT Sbjct: 219 HLLPLT 224>XP_005245785 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 +VP+ FGA Sbjct: 190 MVPVRFGA 197>NP_057688 Length = 1761 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 PLTFGA 9 PLTFG+ Sbjct: 482 PLTFGS 487>NP_003649 Length = 279 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 HLVP T G Sbjct: 85 HLVPATPG 92>NP_004317 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 +VPL FG Sbjct: 764 MVPLPFG 770>NP_689914 Length = 5058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLVPLTFG 8 +L+P TFG Sbjct: 3775 NLIPGTFG 3782>NP_055521 Length = 963 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P T+GA Sbjct: 898 LLPQTYGA 905>NP_848695 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P+ FGA Sbjct: 44 LLPIFFGA 51>NP_001258791 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 +L P TFG Sbjct: 92 YLFPTTFG 99>NP_056261 Length = 2275 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 HL+ L FG Sbjct: 311 HLLQLAFG 318>NP_849188 Length = 2400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VPLTFG 8 VPL+FG Sbjct: 72 VPLSFG 77>NP_848696 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P+ FGA Sbjct: 44 LLPIFFGA 51>NP_775787 Length = 520 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 +L P TFG Sbjct: 81 YLFPTTFG 88>NP_612385 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 3 VPLTFG 8 VP TFG Sbjct: 351 VPFTFG 356>NP_848697 Length = 143 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P+ FGA Sbjct: 44 LLPIFFGA 51>NP_110416 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P+ FGA Sbjct: 44 LLPIFFGA 51>NP_004648 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 PLTFG 8 PLTFG Sbjct: 294 PLTFG 298>XP_005260619 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P+ FGA Sbjct: 44 LLPIFFGA 51>XP_005269298 Length = 981 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LVPLTFGA 9 L+P T+GA Sbjct: 916 LLPQTYGA 923>XP_006711822 Length = 2266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 HL+ L FG Sbjct: 302 HLLQLAFG 309>XP_006711821 Length = 2301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLVPLTFG 8 HL+ L FG Sbjct: 337 HLLQLAFG 344>XP_005277475 Length = 1352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 +VPL FG Sbjct: 690 MVPLPFG 696>XP_005277474 Length = 1414 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 +VPL FG Sbjct: 764 MVPLPFG 770>XP_006711546 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 +VPL FG Sbjct: 764 MVPLPFG 770>XP_005273028 Length = 1426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 LVPLTFG 8 +VPL FG Sbjct: 764 MVPLPFG 770Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.332 0.150 0.494 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 721,254 Number of extensions: 1362 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |