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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000258                                                              20     390
NP_001035957                                                           20     390
XP_006721990                                                           20     390
XP_006721989                                                           20     390
XP_005258041                                                           20     390
XP_006721988                                                           20     390
XP_006721987                                                           20     390
XP_006721986                                                           20     390
XP_005258040                                                           20     390
XP_006721985                                                           20     390
NP_004954                                                              17    4312
NP_079222                                                              15    9605
XP_005256222                                                           15    9605
XP_005256221                                                           15    9605
XP_005256220                                                           15    9605
XP_005256217                                                           15    9605
XP_005256219                                                           15    9605
XP_005256218                                                           15    9605
XP_005256216                                                           15    9605
XP_006721339                                                           15    9605
XP_005256215                                                           15    9605
XP_005256214                                                           15    9605
XP_006721338                                                           15    9605
XP_005256213                                                           15    9605
XP_005273400                                                           15    9605

>NP_000258
          Length = 2818

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2571 HLRKVSVSE 2579



>NP_001035957
          Length = 2839

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2592 HLRKVSVSE 2600



>XP_006721990
          Length = 2823

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2602 HLRKVSVSE 2610



>XP_006721989
          Length = 2823

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2602 HLRKVSVSE 2610



>XP_005258041
          Length = 2836

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2571 HLRKVSVSE 2579



>XP_006721988
          Length = 2846

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2581 HLRKVSVSE 2589



>XP_006721987
          Length = 2849

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2602 HLRKVSVSE 2610



>XP_006721986
          Length = 2854

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2589 HLRKVSVSE 2597



>XP_005258040
          Length = 2857

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2592 HLRKVSVSE 2600



>XP_006721985
          Length = 2867

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1    HLRKVSVSQ 9
            HLRKVSVS+
Sbjct: 2602 HLRKVSVSE 2610



>NP_004954
          Length = 1073

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           HLR+ ++SQ
Sbjct: 651 HLRQANISQ 659



>NP_079222
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256222
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256221
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256220
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256217
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256219
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256218
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_005256216
          Length = 254

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 118 NLKKVGISQ 126



>XP_006721339
          Length = 260

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 124 NLKKVGISQ 132



>XP_005256215
          Length = 260

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 124 NLKKVGISQ 132



>XP_005256214
          Length = 267

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 131 NLKKVGISQ 139



>XP_006721338
          Length = 268

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 132 NLKKVGISQ 140



>XP_005256213
          Length = 300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   HLRKVSVSQ 9
           +L+KV +SQ
Sbjct: 164 NLKKVGISQ 172



>XP_005273400
          Length = 311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   HLRKVSV 7
           HL+K+S+
Sbjct: 299 HLQKISI 305



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.122    0.309 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 395,146
Number of extensions: 460
Number of successful extensions: 25
Number of sequences better than 10000.0: 25
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 25
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)