Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004324 20 509 XP_005250103 20 509 XP_005250102 20 509 NP_004981 17 2528 XP_006719461 17 2528 NP_940912 16 5631 NP_839955 16 5631 NP_001020095 16 5631 XP_005265807 16 5631 XP_006714105 16 5631 XP_005265805 16 5631 XP_005265804 16 5631 NP_001073978 16 5631 NP_060731 16 5631 NP_940906 16 5631 NP_689524 16 7355 NP_001035700 16 7355 NP_078856 16 7355 NP_954981 16 7355 NP_001135836 15 9605 NP_037470 15 9605 NP_570139 15 9605 NP_001161052 15 9605 NP_055663 15 9605 NP_056996 15 9605 NP_113655 15 9605 NP_001128248 15 9605 NP_001128247 15 9605 NP_722577 15 9605 NP_001095137 15 9605 NP_085076 15 9605 NP_001005417 15 9605 NP_065907 15 9605 NP_003492 15 9605 NP_001243497 15 9605 NP_001138641 15 9605 NP_001138640 15 9605 NP_001245355 15 9605 NP_001245357 15 9605 NP_003771 15 9605 NP_003612 15 9605 NP_001243498 15 9605 XP_005255055 15 9605 XP_005255054 15 9605 XP_005266419 15 9605 XP_006718728 15 9605 XP_005274241 15 9605 XP_005274240 15 9605 XP_005274239 15 9605 XP_006718436 15 9605 XP_006718435 15 9605 XP_005253274 15 9605 XP_006718416 15 9605 XP_006718415 15 9605 XP_006718414 15 9605 XP_006718413 15 9605 XP_005253234 15 9605 XP_006718412 15 9605 XP_005253233 15 9605 XP_005253232 15 9605 XP_005253231 15 9605 XP_005250985 15 9605 XP_006716634 15 9605 XP_006714863 15 9605 XP_006714862 15 9605 XP_005268578 15 9605 XP_005248070 15 9605 XP_005248069 15 9605 XP_005248068 15 9605 XP_006711080 15 9605 XP_005271361 15 9605 NP_073733 15 9605>NP_004324 Length = 766 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLFVSKFF 9 LLFVSKFF Sbjct: 288 LLFVSKFF 295>XP_005250103 Length = 758 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLFVSKFF 9 LLFVSKFF Sbjct: 288 LLFVSKFF 295>XP_005250102 Length = 767 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LLFVSKFF 9 LLFVSKFF Sbjct: 288 LLFVSKFF 295>NP_004981 Length = 900 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFVSKFF 9 +FVSKFF Sbjct: 659 MFVSKFF 665>XP_006719461 Length = 666 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LFVSKFF 9 +FVSKFF Sbjct: 425 MFVSKFF 431>NP_940912 Length = 1313 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLLFVSKF 8 HL F+S F Sbjct: 77 HLAFISNF 84>NP_839955 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 517 FISKFF 522>NP_001020095 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 532 FISKFF 537>XP_005265807 Length = 879 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 517 FISKFF 522>XP_006714105 Length = 897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 535 FISKFF 540>XP_005265805 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 550 FISKFF 555>XP_005265804 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 550 FISKFF 555>NP_001073978 Length = 253 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 +LLFV FF Sbjct: 18 YLLFVFNFF 26>NP_060731 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FVSKFF 9 F+SKFF Sbjct: 532 FISKFF 537>NP_940906 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLFVSKF 8 LLF+SKF Sbjct: 95 LLFLSKF 101>NP_689524 Length = 226 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 L+F+S FF Sbjct: 8 LMFLSSFF 15>NP_001035700 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 ++FVSK F Sbjct: 360 IIFVSKMF 367>NP_078856 Length = 1120 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 ++FVSK F Sbjct: 411 IIFVSKMF 418>NP_954981 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 H+LF+SK Sbjct: 135 HVLFLSK 141>NP_001135836 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LLFVSKFF 9 LL++++FF Sbjct: 234 LLYIAQFF 241>NP_037470 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LLFVSKFF 9 LL++++FF Sbjct: 264 LLYIAQFF 271>NP_570139 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 +L+FV FF Sbjct: 11 YLMFVFNFF 19>NP_001161052 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 H+LF FF Sbjct: 315 HVLFEDTFF 323>NP_055663 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 H+LF FF Sbjct: 466 HVLFEDTFF 474>NP_056996 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LFVSKFF 9 LF+ KFF Sbjct: 1391 LFLEKFF 1397>NP_113655 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 LLF++ FF Sbjct: 609 LLFLTSFF 616>NP_001128248 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142>NP_001128247 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142>NP_722577 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 H L+++ FF Sbjct: 650 HFLYLATFF 658>NP_001095137 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 HL ++ K F Sbjct: 140 HLTYIQKIF 148>NP_085076 Length = 401 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLLFVSKF 8 HL F S+F Sbjct: 67 HLAFFSRF 74>NP_001005417 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLLFVSKF 8 HL F S+F Sbjct: 38 HLAFFSRF 45>NP_065907 Length = 1081 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLL+VS+ Sbjct: 1071 HLLYVSE 1077>NP_003492 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 HL ++ K F Sbjct: 140 HLTYIQKIF 148>NP_001243497 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 576 HVLHVNKF 583>NP_001138641 Length = 997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 H L+++ FF Sbjct: 780 HFLYLATFF 788>NP_001138640 Length = 1079 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 H L+++ FF Sbjct: 849 HFLYLATFF 857>NP_001245355 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 LLF++ FF Sbjct: 595 LLFLTSFF 602>NP_001245357 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 LLF++ FF Sbjct: 633 LLFLTSFF 640>NP_003771 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLLFVSKF 8 HL F S+F Sbjct: 38 HLAFFSRF 45>NP_003612 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 688 HVLHVNKF 695>NP_001243498 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 545 HVLHVNKF 552>XP_005255055 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 H+LF FF Sbjct: 466 HVLFEDTFF 474>XP_005255054 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 H+LF FF Sbjct: 466 HVLFEDTFF 474>XP_005266419 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 LLFVSKFF 9 LL++++FF Sbjct: 226 LLYIAQFF 233>XP_006718728 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005274241 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005274240 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_005274239 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142>XP_006718436 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 +L+FV FF Sbjct: 11 YLMFVFNFF 19>XP_006718435 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 +L+FV FF Sbjct: 21 YLMFVFNFF 29>XP_005253274 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLLFVSKFF 9 +L+FV FF Sbjct: 21 YLMFVFNFF 29>XP_006718416 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 556 HVLHVNKF 563>XP_006718415 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 611 HVLHVNKF 618>XP_006718414 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 622 HVLHVNKF 629>XP_006718413 Length = 887 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 699 HVLHVNKF 706>XP_005253234 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 688 HVLHVNKF 695>XP_006718412 Length = 927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 699 HVLHVNKF 706>XP_005253233 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 749 HVLHVNKF 756>XP_005253232 Length = 948 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 760 HVLHVNKF 767>XP_005253231 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLLFVSKF 8 H+L V+KF Sbjct: 749 HVLHVNKF 756>XP_005250985 Length = 1406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LFVSKFF 9 LF+ KFF Sbjct: 1391 LFLEKFF 1397>XP_006716634 Length = 1420 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LFVSKFF 9 LF+ KFF Sbjct: 1405 LFLEKFF 1411>XP_006714863 Length = 921 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 LLF++ FF Sbjct: 571 LLFLTSFF 578>XP_006714862 Length = 956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 LLF++ FF Sbjct: 606 LLFLTSFF 613>XP_005268578 Length = 959 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLFVSKFF 9 LLF++ FF Sbjct: 609 LLFLTSFF 616>XP_005248070 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 HL ++ K F Sbjct: 140 HLTYIQKIF 148>XP_005248069 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 HL ++ K F Sbjct: 140 HLTYIQKIF 148>XP_005248068 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HLLFVSKFF 9 HL ++ K F Sbjct: 140 HLTYIQKIF 148>XP_006711080 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLLFVSKF 8 HL F S+F Sbjct: 38 HLAFFSRF 45>XP_005271361 Length = 372 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLLFVSKF 8 HL F S+F Sbjct: 38 HLAFFSRF 45>NP_073733 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLLFVSK 7 HLLF+S+ Sbjct: 136 HLLFMSQ 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.357 0.162 0.525 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 446,716 Number of extensions: 791 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |