Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_068838 17 3301 NP_001138882 17 3301 NP_001138880 17 3301 XP_005262246 17 3301 XP_005262245 17 3301 XP_005262244 17 3301 XP_006724750 17 3301 XP_005262243 17 3301 NP_031389 17 3301 NP_001138881 17 3301 NP_057646 17 4312 NP_002717 17 4312 NP_056505 17 4312 NP_060385 17 4312 NP_444251 17 4312 NP_001230242 17 4312 NP_001183980 17 4312 XP_006719533 17 4312 XP_005267101 17 4312 XP_006712484 17 4312 XP_006712483 17 4312 XP_005246521 17 4312 NP_009224 16 5631 NP_001239133 16 5631 NP_001002029 16 5631 NP_490595 16 5631 NP_001229752 16 5631 XP_006721082 16 5631 XP_005263887 16 5631 NP_001232 16 5631 NP_694940 16 5631 NP_660213 16 7355 NP_116162 16 7355 NP_060487 16 7355 NP_001073918 16 7355 XP_005276388 16 7355 XP_005269994 16 7355 XP_006717743 16 7355 XP_006713856 16 7355 XP_005269424 16 7355 XP_006713855 16 7355 XP_005269422 16 7355 XP_006713854 16 7355 XP_005269420 16 7355 XP_005269419 16 7355 NP_036485 16 7355 NP_001265853 15 9605 NP_113584 15 9605 NP_065145 15 9605 NP_001121646 15 9605 NP_002310 15 9605 NP_001276863 15 9605 XP_005262029 15 9605 XP_005262028 15 9605 XP_005262026 15 9605 XP_006724637 15 9605 XP_005262025 15 9605 XP_005262024 15 9605 XP_005262023 15 9605 XP_005262022 15 9605 XP_005250404 15 9605 XP_005250403 15 9605 XP_006714366 15 9605 XP_006714365 15 9605 NP_003351 15 9605 NP_000929 15 9605>NP_068838 Length = 761 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL+R K+ C Sbjct: 408 HLMRKKYQC 416>NP_001138882 Length = 382 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRVKFAC 9 +RV+FAC Sbjct: 50 LRVRFAC 56>NP_001138880 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRVKFAC 9 +RV+FAC Sbjct: 139 LRVRFAC 145>XP_005262246 Length = 761 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL+R K+ C Sbjct: 408 HLMRKKYQC 416>XP_005262245 Length = 807 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL+R K+ C Sbjct: 454 HLMRKKYQC 462>XP_005262244 Length = 807 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL+R K+ C Sbjct: 454 HLMRKKYQC 462>XP_006724750 Length = 807 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL+R K+ C Sbjct: 454 HLMRKKYQC 462>XP_005262243 Length = 807 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL+R K+ C Sbjct: 454 HLMRKKYQC 462>NP_031389 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRVKFAC 9 +RV+FAC Sbjct: 139 LRVRFAC 145>NP_001138881 Length = 471 Score = 16.9 bits (32), Expect = 3301 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IRVKFAC 9 +RV+FAC Sbjct: 139 LRVRFAC 145>NP_057646 Length = 1049 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ + F C Sbjct: 90 HLVEIDFRC 98>NP_002717 Length = 710 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L RVKF+C Sbjct: 168 LERVKFSC 175>NP_056505 Length = 1315 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 HL++V ++C Sbjct: 713 HLLKVLYSC 721>NP_060385 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR +FAC Sbjct: 426 LIRSQFAC 433>NP_444251 Length = 570 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL++ K+ C Sbjct: 336 HLLKKKYVC 344>NP_001230242 Length = 1294 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 HL++V ++C Sbjct: 713 HLLKVLYSC 721>NP_001183980 Length = 569 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 HL++ K+ C Sbjct: 335 HLLKKKYVC 343>XP_006719533 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR +FAC Sbjct: 369 LIRSQFAC 376>XP_005267101 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L RVKF+C Sbjct: 168 LERVKFSC 175>XP_006712484 Length = 851 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 HL++V ++C Sbjct: 713 HLLKVLYSC 721>XP_006712483 Length = 1306 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 HL++V ++C Sbjct: 704 HLLKVLYSC 712>XP_005246521 Length = 1315 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 HL++V ++C Sbjct: 713 HLLKVLYSC 721>NP_009224 Length = 1744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVKFAC 9 R+KFAC Sbjct: 1613 RMKFAC 1618>NP_001239133 Length = 1698 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVKFAC 9 R+KFAC Sbjct: 1567 RMKFAC 1572>NP_001002029 Length = 1744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVKFAC 9 R+KFAC Sbjct: 1613 RMKFAC 1618>NP_490595 Length = 730 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 H+I+V AC Sbjct: 102 HVIKVAHAC 110>NP_001229752 Length = 1744 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RVKFAC 9 R+KFAC Sbjct: 1613 RMKFAC 1618>XP_006721082 Length = 287 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 H++R+K +C Sbjct: 10 HIVRLKPSC 18>XP_005263887 Length = 709 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 H+I+V AC Sbjct: 102 HVIKVAHAC 110>NP_001232 Length = 663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 H+I+V AC Sbjct: 102 HVIKVAHAC 110>NP_694940 Length = 287 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HLIRVKFAC 9 H++R+K +C Sbjct: 10 HIVRLKPSC 18>NP_660213 Length = 161 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLIRVK 6 HLIR+K Sbjct: 115 HLIRIK 120>NP_116162 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>NP_060487 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HLIRVKFA 8 H+I+VK+A Sbjct: 388 HVIKVKWA 395>NP_001073918 Length = 1060 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ +AC Sbjct: 661 LVRILYAC 668>XP_005276388 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 7/9 (77%) Query: 1 HLIRVKFAC 9 H+++V + C Sbjct: 29 HIVQVSYIC 37>XP_005269994 Length = 898 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 HLIRVKFA 8 H+I+VK+A Sbjct: 388 HVIKVKWA 395>XP_006717743 Length = 1090 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ +AC Sbjct: 691 LVRILYAC 698>XP_006713856 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>XP_005269424 Length = 743 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>XP_006713855 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>XP_005269422 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>XP_006713854 Length = 777 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>XP_005269420 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>XP_005269419 Length = 803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 LIR+ F+C Sbjct: 220 LIRLDFSC 227>NP_036485 Length = 314 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ V F C Sbjct: 25 HLLSVLFLC 33>NP_001265853 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLIRVK 6 HL+RVK Sbjct: 193 HLLRVK 198>NP_113584 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>NP_065145 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLIRVKFA 8 HL +KFA Sbjct: 7 HLFNLKFA 14>NP_001121646 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLIRVKFA 8 HL+ VK+A Sbjct: 149 HLLGVKYA 156>NP_002310 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ F+C Sbjct: 206 LVRLDFSC 213>NP_001276863 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ F+C Sbjct: 206 LVRLDFSC 213>XP_005262029 Length = 4240 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_005262028 Length = 4341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_005262026 Length = 4359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_006724637 Length = 4365 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1142 HLMLQKFLC 1150>XP_005262025 Length = 4373 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_005262024 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_005262023 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_005262022 Length = 4374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HLIRVKFAC 9 HL+ KF C Sbjct: 1151 HLMLQKFLC 1159>XP_005250404 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ F+C Sbjct: 206 LVRLDFSC 213>XP_005250403 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ F+C Sbjct: 206 LVRLDFSC 213>XP_006714366 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLIRVKFA 8 HL+ VK+A Sbjct: 149 HLLGVKYA 156>XP_006714365 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLIRVKFA 8 HL+ VK+A Sbjct: 149 HLLGVKYA 156>NP_003351 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLIRVKFA 8 HL+ VK+A Sbjct: 149 HLLGVKYA 156>NP_000929 Length = 1174 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 LIRVKFAC 9 L+R+ +AC Sbjct: 1148 LVRMPYAC 1155Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.352 0.152 0.550 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 460,508 Number of extensions: 1014 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |