Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_077816 17 3301 XP_006720682 17 3301 XP_005268318 17 3301 NP_006050 17 4312 NP_002007 16 5631 NP_006763 16 5631 NP_001193988 16 5631 NP_001193987 16 5631 NP_001273651 16 5631 NP_055427 16 5631 NP_001273652 16 5631 XP_006720774 16 5631 XP_006720773 16 5631 XP_006720772 16 5631 XP_006720771 16 5631 XP_005251899 16 5631 NP_003635 16 7355 NP_958836 16 7355 NP_958839 16 7355 NP_001124303 16 7355 NP_001034484 16 7355 NP_115583 16 7355 NP_001275763 16 7355 NP_065928 16 7355 NP_060009 16 7355 NP_056518 16 7355 XP_006722984 16 7355 XP_006722983 16 7355 XP_005256892 16 7355 XP_005256891 16 7355 XP_005256890 16 7355 XP_005256888 16 7355 XP_005256889 16 7355 XP_005256527 16 7355 XP_006721125 16 7355 XP_006716866 16 7355 XP_006716865 16 7355 XP_006716864 16 7355 XP_005251556 16 7355 XP_006716863 16 7355 XP_006716862 16 7355 XP_006716861 16 7355 XP_006716860 16 7355 XP_006716859 16 7355 XP_006716858 16 7355 NP_060509 15 9605 NP_699161 15 9605 NP_036546 15 9605 NP_001157865 15 9605 NP_031384 15 9605 NP_001424 15 9605 NP_060388 15 9605 NP_001157864 15 9605 NP_113674 15 9605 NP_001248389 15 9605 NP_001138608 15 9605 NP_689451 15 9605 NP_001138606 15 9605 NP_001157863 15 9605 NP_001007102 15 9605 NP_001248387 15 9605 NP_001138607 15 9605 NP_001138609 15 9605 NP_689452 15 9605 NP_004368 15 9605 NP_001248388 15 9605 NP_001008901 15 9605 NP_065757 15 9605 NP_001138917 15 9605 NP_001138916 15 9605 NP_000479 15 9605 XP_005261074 15 9605 XP_006724099 15 9605 XP_006724098 15 9605 XP_005260355 15 9605 XP_006721832 15 9605 XP_006717362 15 9605 XP_005252310 15 9605 XP_006714309 15 9605 XP_006713582 15 9605 XP_005245255 15 9605 NP_789761 15 9605>NP_077816 Length = 1499 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HLADSRKKS 9 HLAD+R K+ Sbjct: 58 HLADNRLKT 66>XP_006720682 Length = 803 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HLADSRKKS 9 HLAD+R K+ Sbjct: 58 HLADNRLKT 66>XP_005268318 Length = 1499 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HLADSRKKS 9 HLAD+R K+ Sbjct: 58 HLADNRLKT 66>NP_006050 Length = 1575 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 LAD+RKK+ Sbjct: 1370 LADTRKKT 1377>NP_002007 Length = 4061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 H ADS +KS Sbjct: 672 HSADSSRKS 680>NP_006763 Length = 1343 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 101 HLGRSRRKS 109>NP_001193988 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 ADS+KKS Sbjct: 283 ADSKKKS 289>NP_001193987 Length = 500 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 ADS+KKS Sbjct: 322 ADSKKKS 328>NP_001273651 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 LA+SRKK+ Sbjct: 615 LAESRKKT 622>NP_055427 Length = 1118 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 LA+SRKK+ Sbjct: 616 LAESRKKT 623>NP_001273652 Length = 651 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 LA+SRKK+ Sbjct: 616 LAESRKKT 623>XP_006720774 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 ADS+KKS Sbjct: 261 ADSKKKS 267>XP_006720773 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 ADS+KKS Sbjct: 261 ADSKKKS 267>XP_006720772 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 ADS+KKS Sbjct: 261 ADSKKKS 267>XP_006720771 Length = 550 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 ADS+KKS Sbjct: 372 ADSKKKS 378>XP_005251899 Length = 1117 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 LA+SRKK+ Sbjct: 616 LAESRKKT 623>NP_003635 Length = 336 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 181 HIADLRKQ 188>NP_958836 Length = 416 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 261 HIADLRKQ 268>NP_958839 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 321 HIADLRKQ 328>NP_001124303 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 257 HIADLRKQ 264>NP_001034484 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 180 HLRRSRRKS 188>NP_115583 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 A+SRKKS Sbjct: 513 AESRKKS 519>NP_001275763 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 A+SRKKS Sbjct: 513 AESRKKS 519>NP_065928 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 A+SRKKS Sbjct: 4368 AESRKKS 4374>NP_060009 Length = 4116 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ADSRKK 8 ADSRKK Sbjct: 1969 ADSRKK 1974>NP_056518 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HLA RKK Sbjct: 253 HLAQLRKK 260>XP_006722984 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 A+SRKKS Sbjct: 159 AESRKKS 165>XP_006722983 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 A+SRKKS Sbjct: 513 AESRKKS 519>XP_005256892 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 198 HIADLRKQ 205>XP_005256891 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 198 HIADLRKQ 205>XP_005256890 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 198 HIADLRKQ 205>XP_005256888 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 257 HIADLRKQ 264>XP_005256889 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 H+AD RK+ Sbjct: 257 HIADLRKQ 264>XP_005256527 Length = 4427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ADSRKKS 9 A+SRKKS Sbjct: 4368 AESRKKS 4374>XP_006721125 Length = 4070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ADSRKK 8 ADSRKK Sbjct: 1923 ADSRKK 1928>XP_006716866 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 71 HLRRSRRKS 79>XP_006716865 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 115 HLRRSRRKS 123>XP_006716864 Length = 283 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 129 HLRRSRRKS 137>XP_005251556 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 172 HLRRSRRKS 180>XP_006716863 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 219 HLRRSRRKS 227>XP_006716862 Length = 392 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 238 HLRRSRRKS 246>XP_006716861 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 252 HLRRSRRKS 260>XP_006716860 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 252 HLRRSRRKS 260>XP_006716859 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 252 HLRRSRRKS 260>XP_006716858 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HL SR+KS Sbjct: 252 HLRRSRRKS 260>NP_060509 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 HLA+S+K Sbjct: 103 HLANSKK 109>NP_699161 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 L+DS+K+S Sbjct: 56 LSDSKKRS 63>NP_036546 Length = 1393 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HLA S KKS Sbjct: 540 HLALSDKKS 548>NP_001157865 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 L+DSRK++ Sbjct: 374 LSDSRKRT 381>NP_031384 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 L+DSRK++ Sbjct: 476 LSDSRKRT 483>NP_001424 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADSRKKS 9 ADS KKS Sbjct: 393 ADSEKKS 399>NP_060388 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 HL +S+KK Sbjct: 176 HLEESQKK 183>NP_001157864 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 L+DSRK++ Sbjct: 419 LSDSRKRT 426>NP_113674 Length = 852 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 167 HLVSSRKR 174>NP_001248389 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 131 HLVSSRKR 138>NP_001138608 Length = 691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 328 HLSDSR 333>NP_689451 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 328 HLSDSR 333>NP_001138606 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 294 HLSDSR 299>NP_001157863 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 L+DSRK++ Sbjct: 374 LSDSRKRT 381>NP_001007102 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 131 HLVSSRKR 138>NP_001248387 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 169 HLVSSRKR 176>NP_001138607 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 328 HLSDSR 333>NP_001138609 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 328 HLSDSR 333>NP_689452 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 328 HLSDSR 333>NP_004368 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HL+DSR Sbjct: 328 HLSDSR 333>NP_001248388 Length = 816 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 131 HLVSSRKR 138>NP_001008901 Length = 123 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HLA R+K+ Sbjct: 25 HLASCRRKN 33>NP_065757 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 H++D+RK Sbjct: 427 HMSDNRK 433>NP_001138917 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 H++D+RK Sbjct: 427 HMSDNRK 433>NP_001138916 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 H++D+RK Sbjct: 412 HMSDNRK 418>NP_000479 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HLADS+ Sbjct: 97 HLADSK 102>XP_005261074 Length = 1088 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 H++D+RK Sbjct: 368 HMSDNRK 374>XP_006724099 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 H++D+RK Sbjct: 427 HMSDNRK 433>XP_006724098 Length = 1143 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HLADSRK 7 H++D+RK Sbjct: 427 HMSDNRK 433>XP_005260355 Length = 103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HLA R+K+ Sbjct: 25 HLASCRRKN 33>XP_006721832 Length = 1092 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ADSRKKS 9 ADS KKS Sbjct: 508 ADSEKKS 514>XP_006717362 Length = 831 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 146 HLVSSRKR 153>XP_005252310 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HLADSRKK 8 HL SRK+ Sbjct: 184 HLVSSRKR 191>XP_006714309 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HLADSRKK 8 HL +S+KK Sbjct: 147 HLEESQKK 154>XP_006713582 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LADSRKKS 9 L+DS+K+S Sbjct: 56 LSDSKKRS 63>XP_005245255 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HLADSR 6 HLADS+ Sbjct: 49 HLADSK 54>NP_789761 Length = 148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HLADSRKKS 9 HLA R+K+ Sbjct: 25 HLASCRRKN 33Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.115 0.299 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 582,975 Number of extensions: 1481 Number of successful extensions: 82 Number of sequences better than 10000.0: 82 Number of HSP's gapped: 82 Number of HSP's successfully gapped: 82 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |