Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 21 175 XP_006717989 21 175 NP_115784 16 5631 NP_001139634 16 5631 NP_001167554 16 5631 NP_001167553 16 5631 NP_003972 16 5631 NP_060322 16 5631 NP_955445 16 5631 NP_001167552 16 5631 NP_001258871 16 5631 NP_001254509 16 5631 XP_006720823 16 5631 XP_006720822 16 5631 XP_005255044 16 5631 XP_005255043 16 5631 XP_006716433 16 5631 XP_005273633 16 5631 XP_006716432 16 5631 XP_005273632 16 5631 NP_112561 16 5631 XP_005274573 16 7355 NP_001093326 15 9605 NP_001093327 15 9605 NP_003630 15 9605 NP_065194 15 9605 NP_071761 15 9605 NP_060875 15 9605 XP_006726572 15 9605 XP_006726571 15 9605 XP_006726570 15 9605 XP_003960511 15 9605 XP_005274821 15 9605 XP_005274820 15 9605 XP_005274818 15 9605 XP_006724916 15 9605 XP_005274817 15 9605 XP_005258057 15 9605 XP_006717414 15 9605 XP_006710283 15 9605 XP_006710282 15 9605 NP_919415 15 9605 NP_003565 15 9605>NP_000305 Length = 403 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HKMMFETI 8 HKMMFETI Sbjct: 196 HKMMFETI 203>XP_006717989 Length = 388 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HKMMFETI 8 HKMMFETI Sbjct: 181 HKMMFETI 188>NP_115784 Length = 1483 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 H M F+T+Q Sbjct: 1382 HPMDFQTVQ 1390>NP_001139634 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKMMFETIQ 9 HK++FE ++ Sbjct: 299 HKLLFEDLR 307>NP_001167554 Length = 1039 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 977 KMLFETL 983>NP_001167553 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 978 KMLFETL 984>NP_003972 Length = 620 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 348 HKELFEGVQ 356>NP_060322 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 1000 KMLFETL 1006>NP_955445 Length = 606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 348 HKELFEGVQ 356>NP_001167552 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 1000 KMLFETL 1006>NP_001258871 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKMMFETIQ 9 HK++FE ++ Sbjct: 222 HKLLFEDLR 230>NP_001254509 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 307 HKELFEGVQ 315>XP_006720823 Length = 562 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 348 HKELFEGVQ 356>XP_006720822 Length = 563 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 348 HKELFEGVQ 356>XP_005255044 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 348 HKELFEGVQ 356>XP_005255043 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +FE +Q Sbjct: 348 HKELFEGVQ 356>XP_006716433 Length = 3069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 +MM ETIQ Sbjct: 1974 QMMMETIQ 1981>XP_005273633 Length = 3069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 +MM ETIQ Sbjct: 1974 QMMMETIQ 1981>XP_006716432 Length = 3172 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 +MM ETIQ Sbjct: 2077 QMMMETIQ 2084>XP_005273632 Length = 3172 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 +MM ETIQ Sbjct: 2077 QMMMETIQ 2084>NP_112561 Length = 2789 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 +MM ETIQ Sbjct: 1694 QMMMETIQ 1701>XP_005274573 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 K+MF T+Q Sbjct: 350 KLMFRTMQ 357>NP_001093326 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 359 HKIVMETV 366>NP_001093327 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 291 HKIVMETV 298>NP_003630 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 291 HKIVMETV 298>NP_065194 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 H M+ ET+Q Sbjct: 172 HSMIQETLQ 180>NP_071761 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 K +FETI+ Sbjct: 371 KTLFETIE 378>NP_060875 Length = 184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 KM+FET Q Sbjct: 171 KMVFETGQ 178>XP_006726572 Length = 2066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 938 HKHVFLTVQ 946>XP_006726571 Length = 3681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 2594 HKHVFLTVQ 2602>XP_006726570 Length = 3722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 2594 HKHVFLTVQ 2602>XP_003960511 Length = 3722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 2594 HKHVFLTVQ 2602>XP_005274821 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 290 HKIVMETV 297>XP_005274820 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 291 HKIVMETV 298>XP_005274818 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 359 HKIVMETV 366>XP_006724916 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 333 HKIVMETV 340>XP_005274817 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 358 HKIVMETV 365>XP_005258057 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KMMFETIQ 9 KM+FET Q Sbjct: 159 KMVFETGQ 166>XP_006717414 Length = 5100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 3972 HKHVFLTVQ 3980>XP_006710283 Length = 2066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 938 HKHVFLTVQ 946>XP_006710282 Length = 2621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIQ 9 HK +F T+Q Sbjct: 1493 HKHVFLTVQ 1501>NP_919415 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKMMFETI 8 HK M +TI Sbjct: 93 HKFMVQTI 100>NP_003565 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKMMFETI 8 HK M +TI Sbjct: 93 HKFMVQTI 100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 339,544 Number of extensions: 577 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |