Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000305 21 175 XP_006717989 21 175 NP_001167554 16 5631 NP_001167553 16 5631 NP_060322 16 5631 NP_001167552 16 5631 NP_001191421 16 7355 NP_751911 16 7355 NP_001213 16 7355 NP_751910 16 7355 NP_751913 16 7355 NP_751909 16 7355 NP_001139634 16 7355 NP_001258871 16 7355 XP_006718063 16 7355 XP_006718062 16 7355 XP_005270262 16 7355 XP_005270260 16 7355 XP_005270259 16 7355 XP_006718061 16 7355 XP_005270258 16 7355 XP_005270257 16 7355 XP_006718060 16 7355 XP_005270256 16 7355 XP_005270255 16 7355 XP_005270254 16 7355 XP_006718059 16 7355 XP_006718058 16 7355 XP_005270252 16 7355 XP_006718056 16 7355 NP_001093326 15 9605 NP_001093327 15 9605 NP_003630 15 9605 XP_005274821 15 9605 XP_005274820 15 9605 XP_005274818 15 9605 XP_006724916 15 9605 XP_005274817 15 9605 NP_001005476 15 9605 NP_003619 15 9605 NP_919415 15 9605 NP_003565 15 9605>NP_000305 Length = 403 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HKMMFETI 8 HKMMFETI Sbjct: 196 HKMMFETI 203>XP_006717989 Length = 388 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HKMMFETI 8 HKMMFETI Sbjct: 181 HKMMFETI 188>NP_001167554 Length = 1039 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 977 KMLFETL 983>NP_001167553 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 978 KMLFETL 984>NP_060322 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 1000 KMLFETL 1006>NP_001167552 Length = 1062 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KMMFETI 8 KM+FET+ Sbjct: 1000 KMLFETL 1006>NP_001191421 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 456 HKFYFENLL 464>NP_751911 Length = 556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 473 HKFYFENLL 481>NP_001213 Length = 495 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 412 HKFYFENLL 420>NP_751910 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 435 HKFYFENLL 443>NP_751913 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 421 HKFYFENLL 429>NP_751909 Length = 527 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 444 HKFYFENLL 452>NP_001139634 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++FE + Sbjct: 299 HKLLFEDL 306>NP_001258871 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++FE + Sbjct: 222 HKLLFEDL 229>XP_006718063 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 254 HKFYFENLL 262>XP_006718062 Length = 506 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 423 HKFYFENLL 431>XP_005270262 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 433 HKFYFENLL 441>XP_005270260 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 446 HKFYFENLL 454>XP_005270259 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 450 HKFYFENLL 458>XP_006718061 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 453 HKFYFENLL 461>XP_005270258 Length = 542 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 459 HKFYFENLL 467>XP_005270257 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 461 HKFYFENLL 469>XP_006718060 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 467 HKFYFENLL 475>XP_005270256 Length = 554 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 471 HKFYFENLL 479>XP_005270255 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 480 HKFYFENLL 488>XP_005270254 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 482 HKFYFENLL 490>XP_006718059 Length = 567 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 484 HKFYFENLL 492>XP_006718058 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 491 HKFYFENLL 499>XP_005270252 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 494 HKFYFENLL 502>XP_006718056 Length = 588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HKMMFETIL 9 HK FE +L Sbjct: 505 HKFYFENLL 513>NP_001093326 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 359 HKIVMETV 366>NP_001093327 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 291 HKIVMETV 298>NP_003630 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 291 HKIVMETV 298>XP_005274821 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 290 HKIVMETV 297>XP_005274820 Length = 419 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 291 HKIVMETV 298>XP_005274818 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 359 HKIVMETV 366>XP_006724916 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 333 HKIVMETV 340>XP_005274817 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKMMFETI 8 HK++ ET+ Sbjct: 358 HKIVMETV 365>NP_001005476 Length = 1149 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIL 9 HK+ F+T L Sbjct: 680 HKIKFQTSL 688>NP_003619 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKMMFETIL 9 HK+ F+T L Sbjct: 680 HKIKFQTSL 688>NP_919415 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKMMFETI 8 HK M +TI Sbjct: 93 HKFMVQTI 100>NP_003565 Length = 294 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKMMFETI 8 HK M +TI Sbjct: 93 HKFMVQTI 100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.142 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,917 Number of extensions: 616 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |