Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138390 22 79 NP_001138386 22 79 NP_001138387 22 79 NP_000132 22 79 NP_075259 22 79 NP_001138388 22 79 NP_001138391 22 79 NP_001138385 22 79 NP_075418 22 79 XP_006717776 22 79 XP_006717775 22 79 XP_006717774 22 79 XP_006717773 22 79 XP_006717772 22 79 XP_006717771 22 79 NP_001167535 18 1482 NP_001167534 18 1482 NP_001167536 18 1482 NP_001167537 18 1482 NP_056934 18 1482 NP_075598 18 1482 NP_075594 18 1482 NP_075593 18 1482 NP_001167538 18 1482 XP_006716377 18 1482 XP_006716376 18 1482 XP_006716375 18 1482 XP_006716374 18 1482 XP_006716373 18 1482 XP_006716372 18 1482 XP_006716371 18 1482 XP_006716370 18 1482 XP_006716369 18 1482 XP_006716368 18 1482 XP_006716367 18 1482 XP_006716366 18 1482 NP_001012660 17 2528 NP_071765 17 3301 NP_068754 17 4312 NP_001171486 17 4312 NP_001171487 17 4312 XP_005246753 17 4312 XP_005246752 17 4312 XP_005246751 17 4312 XP_006712706 17 4312 XP_006712705 17 4312 XP_006712704 17 4312 XP_005246750 17 4312 NP_071341 17 4312 NP_061985 16 5631 NP_543009 16 5631 NP_055472 16 5631 NP_005362 16 5631 XP_005260678 16 5631 XP_006722681 16 5631 XP_006722679 16 5631 XP_005268930 16 5631 NP_060469 16 5631 NP_001122391 16 7355 NP_055623 16 7355 NP_004810 16 7355 NP_115689 16 7355 NP_722576 16 7355 XP_005262424 16 7355 XP_005259343 16 7355 XP_005247107 16 7355 XP_005247106 16 7355 NP_113605 15 9605 NP_036413 15 9605 NP_005178 15 9605 NP_787127 15 9605 NP_072056 15 9605 NP_078898 15 9605 NP_001268405 15 9605 NP_056299 15 9605 XP_006721383 15 9605 XP_006721382 15 9605 XP_005256380 15 9605 XP_006712813 15 9605 NP_997053 15 9605>NP_001138390 Length = 704 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 301 HKLTKRIPL 309>NP_001138386 Length = 709 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 304 HKLTKRIPL 312>NP_001138387 Length = 707 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 327 HKLTKRIPL 335>NP_000132 Length = 821 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 416 HKLTKRIPL 424>NP_075259 Length = 822 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 417 HKLTKRIPL 425>NP_001138388 Length = 706 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 301 HKLTKRIPL 309>NP_001138391 Length = 680 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 328 HKLTKRIPL 336>NP_001138385 Length = 769 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 417 HKLTKRIPL 425>NP_075418 Length = 732 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 327 HKLTKRIPL 335>XP_006717776 Length = 806 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 435 HKLTKRIPL 443>XP_006717775 Length = 726 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 321 HKLTKRIPL 329>XP_006717774 Length = 752 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 347 HKLTKRIPL 355>XP_006717773 Length = 807 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 436 HKLTKRIPL 444>XP_006717772 Length = 838 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 435 HKLTKRIPL 443>XP_006717771 Length = 839 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HKLTKRVPL 9 HKLTKR+PL Sbjct: 436 HKLTKRIPL 444>NP_001167535 Length = 812 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 407 HKLAKSIPL 415>NP_001167534 Length = 820 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 415 HKLAKSIPL 423>NP_001167536 Length = 820 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 413 HKLAKSIPL 421>NP_001167537 Length = 733 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 326 HKLAKSIPL 334>NP_056934 Length = 820 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 413 HKLAKSIPL 421>NP_075598 Length = 822 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 415 HKLAKSIPL 423>NP_075594 Length = 731 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 324 HKLAKSIPL 332>NP_075593 Length = 733 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 326 HKLAKSIPL 334>NP_001167538 Length = 853 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 446 HKLAKSIPL 454>XP_006716377 Length = 741 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 324 HKLAKSIPL 332>XP_006716376 Length = 741 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 324 HKLAKSIPL 332>XP_006716375 Length = 743 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 326 HKLAKSIPL 334>XP_006716374 Length = 743 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 326 HKLAKSIPL 334>XP_006716373 Length = 743 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 326 HKLAKSIPL 334>XP_006716372 Length = 824 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 407 HKLAKSIPL 415>XP_006716371 Length = 830 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 415 HKLAKSIPL 423>XP_006716370 Length = 830 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 413 HKLAKSIPL 421>XP_006716369 Length = 830 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 413 HKLAKSIPL 421>XP_006716368 Length = 832 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 415 HKLAKSIPL 423>XP_006716367 Length = 832 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 415 HKLAKSIPL 423>XP_006716366 Length = 832 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K +PL Sbjct: 415 HKLAKSIPL 423>NP_001012660 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HKL K VPL Sbjct: 75 HKLFKDVPL 83>NP_071765 Length = 1386 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKLTKRVPL 9 H++ +RVPL Sbjct: 1174 HQMPRRVPL 1182>NP_068754 Length = 108 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HKLTKRVP 8 H LT++VP Sbjct: 69 HPLTRKVP 76>NP_001171486 Length = 1118 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 228 KLTNRIPI 235>NP_001171487 Length = 1099 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 239 KLTNRIPI 246>XP_005246753 Length = 619 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 297 KLTNRIPI 304>XP_005246752 Length = 1117 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 239 KLTNRIPI 246>XP_005246751 Length = 1147 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 239 KLTNRIPI 246>XP_006712706 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 240 KLTNRIPI 247>XP_006712705 Length = 1174 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 297 KLTNRIPI 304>XP_006712704 Length = 1204 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 297 KLTNRIPI 304>XP_005246750 Length = 1205 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 297 KLTNRIPI 304>NP_071341 Length = 1088 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT R+P+ Sbjct: 228 KLTNRIPI 235>NP_061985 Length = 2146 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H LT RVP Sbjct: 2020 HTLTLRVP 2027>NP_543009 Length = 363 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H+L KR P Sbjct: 310 HRLLKRTP 317Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H+L KR P Sbjct: 334 HQLLKRTP 341>NP_055472 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 H+LT+ PL Sbjct: 916 HRLTRDAPL 924>NP_005362 Length = 276 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 H L +RVPL Sbjct: 214 HPLFERVPL 222>XP_005260678 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 H+LT+ PL Sbjct: 916 HRLTRDAPL 924>XP_006722681 Length = 1365 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H LT RVP Sbjct: 1239 HTLTLRVP 1246>XP_006722679 Length = 2128 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H LT RVP Sbjct: 2002 HTLTLRVP 2009>XP_005268930 Length = 233 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 H L +RVPL Sbjct: 171 HPLFERVPL 179>NP_060469 Length = 1072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT+ VPL Sbjct: 1056 KLTEEVPL 1063>NP_001122391 Length = 744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KLTKRVP 8 KLT+R+P Sbjct: 611 KLTRRLP 617>NP_055623 Length = 1054 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLTK+ Sbjct: 763 HKLTKK 768>NP_004810 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H LT +VP Sbjct: 861 HSLTDKVP 868>NP_115689 Length = 698 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HKLTKRVPL 9 HK TK+V L Sbjct: 475 HKSTKQVEL 483>NP_722576 Length = 3080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKRVPL 9 LT+R+PL Sbjct: 2613 LTERIPL 2619>XP_005262424 Length = 2875 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LTKRVPL 9 LT+R+PL Sbjct: 2408 LTERIPL 2414>XP_005259343 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 H LT +VP Sbjct: 861 HSLTDKVP 868>XP_005247107 Length = 781 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLTK+ Sbjct: 763 HKLTKK 768>XP_005247106 Length = 1054 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLTK+ Sbjct: 763 HKLTKK 768>NP_113605 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT+RV L Sbjct: 622 KLTRRVTL 629>NP_036413 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HKLTKRVP 8 HK T R+P Sbjct: 534 HKKTFRIP 541>NP_005178 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLT+R Sbjct: 385 HKLTER 390>NP_787127 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLT+R Sbjct: 299 HKLTER 304>NP_072056 Length = 30 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLT+R Sbjct: 25 HKLTQR 30>NP_078898 Length = 847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT+ +PL Sbjct: 292 KLTEMIPL 299>NP_001268405 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT+ +PL Sbjct: 292 KLTEMIPL 299>NP_056299 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HKLTKRV 7 H+LTK++ Sbjct: 136 HRLTKQI 142>XP_006721383 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLT+R Sbjct: 324 HKLTER 329>XP_006721382 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLT+R Sbjct: 324 HKLTER 329>XP_005256380 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKLTKR 6 HKLT+R Sbjct: 360 HKLTER 365>XP_006712813 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 KLTKRVPL 9 KLT+ +PL Sbjct: 269 KLTEMIPL 276>NP_997053 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HKLTKRV 7 H+LTK++ Sbjct: 94 HRLTKQI 100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.139 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 561,905 Number of extensions: 1458 Number of successful extensions: 81 Number of sequences better than 10000.0: 80 Number of HSP's gapped: 81 Number of HSP's successfully gapped: 81 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |