Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_001230925 17 3301 NP_001027 17 3301 NP_001155048 16 5631 NP_056404 16 5631 NP_000531 16 5631 NP_001036188 16 5631 NP_001026 16 5631 NP_115518 16 5631 NP_060600 16 5631 XP_006723382 16 5631 XP_006723381 16 5631 XP_006723380 16 5631 XP_006722394 16 5631 XP_005258167 16 5631 XP_006722393 16 5631 XP_006722392 16 5631 XP_006722391 16 5631 XP_006722390 16 5631 XP_005258166 16 5631 XP_006722389 16 5631 XP_005258165 16 5631 XP_005258164 16 5631 XP_006711873 16 5631 XP_006711871 16 5631 XP_006711870 16 5631 XP_006711869 16 5631 XP_006711868 16 5631 XP_006711867 16 5631 XP_006711866 16 5631 XP_006711865 16 5631 NP_061837 16 7355 NP_001094299 16 7355 XP_005261198 16 7355 XP_006724079 16 7355 XP_006724078 16 7355 XP_006724077 16 7355 XP_005261197 16 7355 XP_005261196 16 7355 NP_001157284 15 9605 NP_068602 15 9605 NP_997320 15 9605 NP_057315 15 9605 NP_001171668 15 9605 NP_777604 15 9605 XP_005258045 15 9605 XP_005267602 15 9605 XP_005253612 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4866 HKIIISSSR 4874>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4882 HKIIISSSR 4890>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4883 HKIIISSSR 4891>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4914 HKIIISSSR 4922>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4934 HKIIISSSR 4942>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4937 HKIIISSSR 4945>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4937 HKIIISSSR 4945>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4937 HKIIISSSR 4945>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 HKIIIS SR Sbjct: 4938 HKIIISSSR 4946>NP_001230925 Length = 4865 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H+II+ FSR Sbjct: 3549 HQIILYFSR 3557>NP_001027 Length = 4870 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H+II+ FSR Sbjct: 3554 HQIILYFSR 3562>NP_001155048 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKIIISFSR 9 HKI+IS + Sbjct: 283 HKIVISIQK 291>NP_056404 Length = 718 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKIIISFSR 9 HKI+IS + Sbjct: 371 HKIVISIQK 379>NP_000531 Length = 5038 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++++ FSR Sbjct: 3699 HQLVLHFSR 3707>NP_001036188 Length = 5033 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++++ FSR Sbjct: 3694 HQLVLHFSR 3702>NP_001026 Length = 4967 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3665 HQLILLFSR 3673>NP_115518 Length = 2537 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1708 HEVIVSFT 1715>NP_060600 Length = 577 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKIIISFSR 9 H I++SF R Sbjct: 318 HDIMVSFGR 326>XP_006723382 Length = 5027 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++++ FSR Sbjct: 3694 HQLVLHFSR 3702>XP_006723381 Length = 5031 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++++ FSR Sbjct: 3698 HQLVLHFSR 3706>XP_006723380 Length = 5032 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++++ FSR Sbjct: 3699 HQLVLHFSR 3707>XP_006722394 Length = 1845 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1015 HEVIVSFT 1022>XP_005258167 Length = 1856 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1026 HEVIVSFT 1033>XP_006722393 Length = 2199 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1369 HEVIVSFT 1376>XP_006722392 Length = 2444 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1614 HEVIVSFT 1621>XP_006722391 Length = 2448 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1618 HEVIVSFT 1625>XP_006722390 Length = 2467 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1638 HEVIVSFT 1645>XP_005258166 Length = 2468 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1638 HEVIVSFT 1645>XP_006722389 Length = 2506 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1708 HEVIVSFT 1715>XP_005258165 Length = 2534 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1704 HEVIVSFT 1711>XP_005258164 Length = 2538 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HKIIISFS 8 H++I+SF+ Sbjct: 1708 HEVIVSFT 1715>XP_006711873 Length = 4954 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3652 HQLILLFSR 3660>XP_006711871 Length = 4906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3596 HQLILLFSR 3604>XP_006711870 Length = 4965 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3663 HQLILLFSR 3671>XP_006711869 Length = 4973 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3663 HQLILLFSR 3671>XP_006711868 Length = 4975 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3665 HQLILLFSR 3673>XP_006711867 Length = 4977 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3675 HQLILLFSR 3683>XP_006711866 Length = 4984 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3674 HQLILLFSR 3682>XP_006711865 Length = 4985 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HKIIISFSR 9 H++I+ FSR Sbjct: 3675 HQLILLFSR 3683>NP_061837 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>NP_001094299 Length = 132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IIISFSR 9 +IISFSR Sbjct: 121 LIISFSR 127>XP_005261198 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>XP_006724079 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>XP_006724078 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>XP_006724077 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>XP_005261197 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>XP_005261196 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KIIISFSR 9 + IISFSR Sbjct: 9 RFIISFSR 16>NP_001157284 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HKIIISF 7 HK I+SF Sbjct: 364 HKSIVSF 370>NP_068602 Length = 684 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HKIIISF 7 HK I+SF Sbjct: 364 HKSIVSF 370>NP_997320 Length = 4471 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKIIISFS 8 HK++ SF+ Sbjct: 3723 HKLLFSFN 3730>NP_057315 Length = 527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKIIIS 6 HKII+S Sbjct: 227 HKIIVS 232>NP_001171668 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKIIISFSR 9 HK +I+F R Sbjct: 82 HKYLINFYR 90>NP_777604 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKIIISFSR 9 HK +I+F R Sbjct: 82 HKYLINFYR 90>XP_005258045 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HKIIIS 6 HKII+S Sbjct: 227 HKIIVS 232>XP_005267602 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HKIIISFSR 9 HK +I+F R Sbjct: 82 HKYLINFYR 90>XP_005253612 Length = 4589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HKIIISFS 8 HK++ SF+ Sbjct: 3841 HKLLFSFN 3848Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.147 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 391,257 Number of extensions: 736 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |