Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 19 665 NP_036462 19 665 NP_001243397 19 665 XP_005269721 19 665 NP_060606 18 1135 NP_001258662 17 4312 NP_997204 17 4312 NP_001035362 16 5631 NP_001073931 16 5631 NP_443098 16 5631 NP_001277199 16 7355 NP_001277200 16 7355 NP_001124389 16 7355 NP_006857 16 7355 NP_005437 16 7355 NP_001153026 16 7355 XP_006726246 16 7355 XP_006726243 16 7355 XP_006726242 16 7355 XP_006726240 16 7355 XP_006726367 16 7355 XP_006726364 16 7355 XP_006726363 16 7355 XP_006726361 16 7355 XP_006726329 16 7355 XP_006726327 16 7355 XP_006726326 16 7355 XP_006726325 16 7355 XP_006723053 16 7355 XP_006723051 16 7355 XP_006723050 16 7355 XP_006723049 16 7355 NP_056193 15 9605 NP_848622 15 9605 NP_003957 15 9605 NP_113663 15 9605 XP_005267468 15 9605 XP_005267467 15 9605 XP_006714571 15 9605 XP_006714570 15 9605 XP_006714569 15 9605 XP_005263134 15 9605 XP_005263558 15 9605 NP_055765 15 9605 NP_001116801 15 9605>NP_001243398 Length = 1781 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HIYMRTKSA 9 HI MRTKSA Sbjct: 1630 HISMRTKSA 1638>NP_036462 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HIYMRTKSA 9 HI MRTKSA Sbjct: 1922 HISMRTKSA 1930>NP_001243397 Length = 1890 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HIYMRTKSA 9 HI MRTKSA Sbjct: 1739 HISMRTKSA 1747>XP_005269721 Length = 2073 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HIYMRTKSA 9 HI MRTKSA Sbjct: 1922 HISMRTKSA 1930>NP_060606 Length = 3477 Score = 18.5 bits (36), Expect = 1135 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HIYMRTKSA 9 H+Y++TK+A Sbjct: 2015 HLYLKTKAA 2023>NP_001258662 Length = 689 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HIYMRT 6 HIY+RT Sbjct: 421 HIYLRT 426>NP_997204 Length = 480 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 YMRTKS 8 YMRTKS Sbjct: 212 YMRTKS 217>NP_001035362 Length = 1762 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HIYMRTKS 8 H+Y+ TK+ Sbjct: 224 HLYLETKT 231>NP_001073931 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HIYMRT 6 HIY+RT Sbjct: 53 HIYIRT 58>NP_443098 Length = 525 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 HIYMRTKS 8 H+Y+ TK+ Sbjct: 224 HLYLETKT 231>NP_001277199 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>NP_001277200 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>NP_001124389 Length = 483 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>NP_006857 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>NP_005437 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 HIYMRTK 7 H Y RTK Sbjct: 367 HFYWRTK 373>NP_001153026 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 HIYMRTK 7 H Y RTK Sbjct: 341 HFYWRTK 347>XP_006726246 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726243 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726242 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726240 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>XP_006726367 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726364 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726363 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726361 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>XP_006726329 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726327 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726326 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006726325 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>XP_006723053 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006723051 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006723050 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 47 HLYRENKSA 55>XP_006723049 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HIYMRTKSA 9 H+Y KSA Sbjct: 59 HLYRENKSA 67>NP_056193 Length = 4388 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 IYMRTKS 8 +Y+RT+S Sbjct: 2855 VYLRTRS 2861>NP_848622 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YMRTKS 8 YMRT+S Sbjct: 562 YMRTRS 567>NP_003957 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YMRTKS 8 YMRT+S Sbjct: 862 YMRTRS 867>NP_113663 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IYMRTKS 8 IYM+TK+ Sbjct: 469 IYMQTKN 475>XP_005267468 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HIYMRTKS 8 H+Y T+S Sbjct: 242 HLYQNTRS 249>XP_005267467 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HIYMRTKS 8 H+Y T+S Sbjct: 242 HLYQNTRS 249>XP_006714571 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YMRTKS 8 YMRT+S Sbjct: 705 YMRTRS 710>XP_006714570 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YMRTKS 8 YMRT+S Sbjct: 862 YMRTRS 867>XP_006714569 Length = 1074 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 YMRTKS 8 YMRT+S Sbjct: 862 YMRTRS 867>XP_005263134 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 HIYMRT 6 H+YM+T Sbjct: 752 HMYMKT 757>XP_005263558 Length = 833 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IYMRTKS 8 IYM+TK+ Sbjct: 469 IYMQTKN 475>NP_055765 Length = 644 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HIYMRTKS 8 H+Y T+S Sbjct: 242 HLYQNTRS 249>NP_001116801 Length = 713 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 HIYMRTKS 8 H+Y T+S Sbjct: 242 HLYQNTRS 249Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.125 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 358,754 Number of extensions: 447 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |