Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001005172 18 1935 NP_001005171 18 1935 NP_001005169 17 3301 NP_001005170 17 3301 NP_060421 17 4312 NP_001164554 17 4312 NP_060221 17 4312 NP_001157851 17 4312 XP_005263761 17 4312 XP_006712688 17 4312 NP_001128504 16 5631 NP_115557 16 5631 NP_001367 16 7355 NP_001269461 16 7355 NP_056154 16 7355 NP_001182325 16 7355 NP_997625 16 7355 NP_001032241 16 7355 NP_001269460 16 7355 NP_005729 16 7355 NP_055906 16 7355 NP_001184154 16 7355 NP_852107 16 7355 NP_001001479 16 7355 XP_006723822 16 7355 XP_006721207 16 7355 XP_006720146 16 7355 XP_005267508 16 7355 NP_001004747 16 7355 NP_112217 16 7355 NP_001004477 16 7355 NP_001153699 15 9605 NP_079413 15 9605 NP_055087 15 9605 NP_060445 15 9605 NP_001274750 15 9605 NP_001274751 15 9605 NP_001274752 15 9605 NP_775733 15 9605 NP_055746 15 9605 XP_006723153 15 9605 XP_005258727 15 9605 XP_005258726 15 9605 XP_006720764 15 9605 XP_005254752 15 9605 XP_006720763 15 9605 XP_006720762 15 9605 XP_005254751 15 9605 XP_005254194 15 9605 XP_005268242 15 9605 XP_005268241 15 9605 XP_005270390 15 9605 XP_006711823 15 9605 NP_733843 15 9605>NP_001005172 Length = 314 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HILIVRLSC 9 H+ +VRL+C Sbjct: 183 HMAVVRLAC 191>NP_001005171 Length = 314 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HILIVRLSC 9 H+ +VRL+C Sbjct: 183 HMAVVRLAC 191>NP_001005169 Length = 324 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HI + RL+C Sbjct: 185 HIALARLAC 193>NP_001005170 Length = 350 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HI + RL+C Sbjct: 211 HIALARLAC 219>NP_060421 Length = 866 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L+VRL Sbjct: 365 HVLVVRL 371>NP_001164554 Length = 764 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L+VRL Sbjct: 263 HVLVVRL 269>NP_060221 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L+VRL Sbjct: 336 HVLVVRL 342>NP_001157851 Length = 183 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+L+ LSC Sbjct: 120 HLLLTGLSC 128>XP_005263761 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L+VRL Sbjct: 29 HVLVVRL 35>XP_006712688 Length = 559 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L+VRL Sbjct: 58 HVLVVRL 64>NP_001128504 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LIVRLSC 9 L++R+SC Sbjct: 53 LVIRISC 59>NP_115557 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LIVRLSC 9 L++R+SC Sbjct: 53 LVIRISC 59>NP_001367 Length = 4646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVRLSC 9 +VRLSC Sbjct: 3935 VVRLSC 3940>NP_001269461 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+LI LSC Sbjct: 506 HMLIHGLSC 514>NP_056154 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+LI LSC Sbjct: 506 HMLIHGLSC 514>NP_001182325 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HI+I+ L C Sbjct: 22 HIVILGLDC 30>NP_997625 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HI+I+ L C Sbjct: 22 HIVILGLDC 30>NP_001032241 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HI+I+ L C Sbjct: 22 HIVILGLDC 30>NP_001269460 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+LI LSC Sbjct: 506 HMLIHGLSC 514>NP_005729 Length = 200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HI+I+ L C Sbjct: 22 HIVILGLDC 30>NP_055906 Length = 1720 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L++RL Sbjct: 419 HLLVIRL 425>NP_001184154 Length = 208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILIVRLSC 9 I +VR+SC Sbjct: 103 IFLVRVSC 110>NP_852107 Length = 1102 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+LI LSC Sbjct: 506 HMLIHGLSC 514>NP_001001479 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+L+ L+C Sbjct: 86 HMLVAALAC 94>XP_006723822 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 H+LI LSC Sbjct: 515 HMLIHGLSC 523>XP_006721207 Length = 159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILIVRLSC 9 I +VR+SC Sbjct: 54 IFLVRVSC 61>XP_006720146 Length = 1226 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L++RL Sbjct: 419 HLLVIRL 425>XP_005267508 Length = 1773 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 H+L++RL Sbjct: 419 HLLVIRL 425>NP_001004747 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ILIVRLSC 9 ILIV +SC Sbjct: 241 ILIVLISC 248>NP_112217 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HILIVRL 7 HI++VRL Sbjct: 292 HIVVVRL 298>NP_001004477 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 ILIVRLSC 9 + ++RLSC Sbjct: 198 LAVIRLSC 205>NP_001153699 Length = 2330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 1003 HLLYVYLDC 1011>NP_079413 Length = 2443 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 1003 HLLYVYLDC 1011>NP_055087 Length = 1686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HILIVRL 7 HI IVRL Sbjct: 288 HITIVRL 294>NP_060445 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HIL + +SC Sbjct: 469 HILEILVSC 477>NP_001274750 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HIL + +SC Sbjct: 355 HILEILVSC 363>NP_001274751 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HIL + +SC Sbjct: 355 HILEILVSC 363>NP_001274752 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HILIVRLSC 9 HIL + +SC Sbjct: 355 HILEILVSC 363>NP_775733 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVRLSC 9 +VRLSC Sbjct: 899 LVRLSC 904>NP_055746 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H L RLSC Sbjct: 318 HALRPRLSC 326>XP_006723153 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H L RLSC Sbjct: 191 HALRPRLSC 199>XP_005258727 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H L RLSC Sbjct: 318 HALRPRLSC 326>XP_005258726 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H L RLSC Sbjct: 318 HALRPRLSC 326>XP_006720764 Length = 1584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 1003 HLLYVYLDC 1011>XP_005254752 Length = 2357 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 917 HLLYVYLDC 925>XP_006720763 Length = 2395 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 1003 HLLYVYLDC 1011>XP_006720762 Length = 2397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 1003 HLLYVYLDC 1011>XP_005254751 Length = 2407 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HILIVRLSC 9 H+L V L C Sbjct: 1003 HLLYVYLDC 1011>XP_005254194 Length = 1689 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HILIVRL 7 HI IVRL Sbjct: 288 HITIVRL 294>XP_005268242 Length = 1285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVRLSC 9 +VRLSC Sbjct: 933 LVRLSC 938>XP_005268241 Length = 1300 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IVRLSC 9 +VRLSC Sbjct: 948 LVRLSC 953>XP_005270390 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LIVRLSC 9 LI+R++C Sbjct: 245 LIIRMNC 251>XP_006711823 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LIVRLSC 9 LI+R++C Sbjct: 248 LIIRMNC 254>NP_733843 Length = 592 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LIVRLSC 9 LI+R++C Sbjct: 248 LIIRMNC 254Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.350 0.155 0.516 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 437,310 Number of extensions: 974 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |