Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_814444 17 4312 NP_004596 17 4312 XP_005259239 17 4312 NP_038347 16 7355 NP_001275762 16 7355 NP_075561 16 7355 NP_954578 16 7355 NP_001269808 16 7355 NP_065871 16 7355 XP_006726883 16 7355 XP_006724993 16 7355 XP_006724992 16 7355 XP_006724991 16 7355 XP_006724990 16 7355 XP_006724989 16 7355 XP_006724988 16 7355 XP_006724987 16 7355 XP_006724986 16 7355 XP_006724985 16 7355 XP_006724984 16 7355 XP_006724983 16 7355 XP_006724982 16 7355 XP_006724981 16 7355 XP_006724980 16 7355 XP_006724979 16 7355 XP_006724978 16 7355 XP_006724977 16 7355 XP_006724976 16 7355 XP_006724460 16 7355 XP_006724459 16 7355 XP_005261947 16 7355 XP_006724458 16 7355 XP_005261945 16 7355 XP_006724457 16 7355 XP_006724456 16 7355 XP_006724455 16 7355 XP_006724431 16 7355 XP_005261875 16 7355 XP_005261874 16 7355 XP_006724429 16 7355 XP_005261872 16 7355 XP_006724428 16 7355 XP_005260528 16 7355 XP_006714553 16 7355 XP_005248406 16 7355 XP_005248404 16 7355 XP_005248403 16 7355 XP_006714552 16 7355 XP_005248402 16 7355 NP_038265 16 7355>NP_814444 Length = 365 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HHSKVASRL 9 H+SK+A +L Sbjct: 158 HYSKIAGQL 166>NP_004596 Length = 350 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HHSKVASRL 9 H+SK+A +L Sbjct: 143 HYSKIAGQL 151>XP_005259239 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 HHSKVASRL 9 H+SK+A +L Sbjct: 14 HYSKIAGQL 22>NP_038347 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 532 HHTQIAS 538>NP_001275762 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 532 HHTQIAS 538>NP_075561 Length = 3197 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>NP_954578 Length = 218 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 181 HHTQIAS 187>NP_001269808 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 215 HHTQIAS 221>NP_065871 Length = 1659 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HHSKVASRL 9 H SK+ SRL Sbjct: 1447 HFSKLPSRL 1455>XP_006726883 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 188 HHTQIAS 194>XP_006724993 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 532 HHTQIAS 538>XP_006724992 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 215 HHTQIAS 221>XP_006724991 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 284 HHTQIAS 290>XP_006724990 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 366 HHTQIAS 372>XP_006724989 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 366 HHTQIAS 372>XP_006724988 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 402 HHTQIAS 408>XP_006724987 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 402 HHTQIAS 408>XP_006724986 Length = 488 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 451 HHTQIAS 457>XP_006724985 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 459 HHTQIAS 465>XP_006724984 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 480 HHTQIAS 486>XP_006724983 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 488 HHTQIAS 494>XP_006724982 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 501 HHTQIAS 507>XP_006724981 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 528 HHTQIAS 534>XP_006724980 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 528 HHTQIAS 534>XP_006724979 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 528 HHTQIAS 534>XP_006724978 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 528 HHTQIAS 534>XP_006724977 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 528 HHTQIAS 534>XP_006724976 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 528 HHTQIAS 534>XP_006724460 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 537 HHTQIAS 543>XP_006724459 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 215 HHTQIAS 221>XP_005261947 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 284 HHTQIAS 290>XP_006724458 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 366 HHTQIAS 372>XP_005261945 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 366 HHTQIAS 372>XP_006724457 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 366 HHTQIAS 372>XP_006724456 Length = 412 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 375 HHTQIAS 381>XP_006724455 Length = 439 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 402 HHTQIAS 408>XP_006724431 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 129 HHTQIAS 135>XP_005261875 Length = 241 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 204 HHTQIAS 210>XP_005261874 Length = 252 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 215 HHTQIAS 221>XP_006724429 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 232 HHTQIAS 238>XP_005261872 Length = 275 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 238 HHTQIAS 244>XP_006724428 Length = 303 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 266 HHTQIAS 272>XP_005260528 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HHSKVASRL 9 H SK+ SRL Sbjct: 744 HFSKLPSRL 752>XP_006714553 Length = 2792 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>XP_005248406 Length = 3214 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>XP_005248404 Length = 3250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>XP_005248403 Length = 3250 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>XP_006714552 Length = 3251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>XP_005248402 Length = 3251 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 HSKVAS 7 HSKVAS Sbjct: 984 HSKVAS 989>NP_038265 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HHSKVAS 7 HH+++AS Sbjct: 532 HHTQIAS 538Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.119 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 398,191 Number of extensions: 397 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |