Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036284 17 3301 XP_006710605 17 3301 NP_072179 17 4312 NP_002881 17 4312 NP_000292 17 4312 NP_001269609 17 4312 NP_001269608 17 4312 NP_689804 17 4312 NP_001273173 17 4312 NP_001273172 17 4312 XP_006719326 17 4312 XP_006719325 17 4312 XP_005251961 17 4312 XP_006717106 17 4312 XP_006717105 17 4312 XP_005251958 17 4312 NP_068380 16 5631 NP_001119593 16 5631 NP_001119594 16 5631 NP_001005466 16 5631 NP_001166953 16 5631 NP_057386 16 5631 NP_002514 16 5631 NP_001243257 16 5631 NP_938406 16 5631 NP_938191 16 5631 NP_061496 16 5631 NP_938197 16 5631 NP_938200 16 5631 NP_938194 16 5631 NP_001243289 16 5631 NP_938202 16 5631 NP_938199 16 5631 NP_938192 16 5631 NP_001243255 16 5631 NP_938193 16 5631 NP_001243290 16 5631 NP_001243258 16 5631 NP_001243254 16 5631 NP_938201 16 5631 NP_001243261 16 5631 NP_001243259 16 5631 NP_938196 16 5631 NP_938198 16 5631 NP_001243256 16 5631 NP_001243260 16 5631 NP_001243288 16 5631 NP_001243253 16 5631 NP_003250 16 5631 XP_006722224 16 5631 XP_006722223 16 5631 XP_005257619 16 5631 XP_006722070 16 5631 XP_005257617 16 5631 XP_005257618 16 5631 XP_005257616 16 5631 XP_005265259 16 5631 NP_001273700 16 7355 NP_115593 16 7355 NP_942592 16 7355 XP_005265728 16 7355 XP_005265724 16 7355 NP_001269796 15 9605 NP_001269800 15 9605 NP_001269801 15 9605 NP_001269799 15 9605 NP_001121163 15 9605 NP_057208 15 9605 NP_001269797 15 9605 NP_001269798 15 9605 NP_060695 15 9605 NP_056083 15 9605 XP_005251560 15 9605 XP_005247302 15 9605 NP_899234 15 9605>NP_036284 Length = 353 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G VSKTLT Sbjct: 91 GPVSKTLT 98>XP_006710605 Length = 353 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G VSKTLT Sbjct: 91 GPVSKTLT 98>NP_072179 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HGKVSK 6 HGK+SK Sbjct: 176 HGKISK 181>NP_002881 Length = 1047 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HGKVSK 6 HGK+SK Sbjct: 353 HGKISK 358>NP_000292 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GKVSKTLT 9 GK+SKT++ Sbjct: 195 GKISKTMS 202>NP_001269609 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HGKVSKTL 8 HGK KTL Sbjct: 556 HGKPDKTL 563>NP_001269608 Length = 1478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HGKVSKTL 8 HGK KTL Sbjct: 556 HGKPDKTL 563>NP_689804 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 HGKVSKTL 8 +G+VSKTL Sbjct: 400 YGEVSKTL 407>NP_001273173 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 HGKVSKTL 8 +G+VSKTL Sbjct: 321 YGEVSKTL 328>NP_001273172 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 HGKVSKTL 8 +G+VSKTL Sbjct: 360 YGEVSKTL 367>XP_006719326 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 HGKVSKTL 8 +G+VSKTL Sbjct: 400 YGEVSKTL 407>XP_006719325 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 HGKVSKTL 8 +G+VSKTL Sbjct: 400 YGEVSKTL 407>XP_005251961 Length = 1433 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HGKVSKTL 8 HGK KTL Sbjct: 556 HGKPDKTL 563>XP_006717106 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HGKVSKTL 8 HGK KTL Sbjct: 556 HGKPDKTL 563>XP_006717105 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HGKVSKTL 8 HGK KTL Sbjct: 556 HGKPDKTL 563>XP_005251958 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HGKVSKTL 8 HGK KTL Sbjct: 556 HGKPDKTL 563>NP_068380 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>NP_001119593 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>NP_001119594 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>NP_001005466 Length = 310 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HGKVSKTLT 9 HG + TLT Sbjct: 160 HGSIQATLT 168>NP_001166953 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HG V +TLT Sbjct: 352 HGYVHETLT 360>NP_057386 Length = 442 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HG V +TLT Sbjct: 353 HGYVHETLT 361>NP_002514 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HGKVSKTL 8 +GK+ KTL Sbjct: 237 YGKIKKTL 244>NP_001243257 Length = 2259 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2066 HSKISKHMT 2074>NP_938406 Length = 2343 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2150 HSKISKHMT 2158>NP_938191 Length = 2366 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2173 HSKISKHMT 2181>NP_061496 Length = 2377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2184 HSKISKHMT 2192>NP_938197 Length = 2306 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2113 HSKISKHMT 2121>NP_938200 Length = 2266 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2073 HSKISKHMT 2081>NP_938194 Length = 2321 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2128 HSKISKHMT 2136>NP_001243289 Length = 2248 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2055 HSKISKHMT 2063>NP_938202 Length = 2243 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2050 HSKISKHMT 2058>NP_938199 Length = 2332 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2139 HSKISKHMT 2147>NP_938192 Length = 2273 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2080 HSKISKHMT 2088>NP_001243255 Length = 2287 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2094 HSKISKHMT 2102>NP_938193 Length = 2298 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2105 HSKISKHMT 2113>NP_001243290 Length = 2246 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2053 HSKISKHMT 2061>NP_001243258 Length = 2250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2057 HSKISKHMT 2065>NP_001243254 Length = 2291 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2098 HSKISKHMT 2106>NP_938201 Length = 2250 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2057 HSKISKHMT 2065>NP_001243261 Length = 2227 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2034 HSKISKHMT 2042>NP_001243259 Length = 2239 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2046 HSKISKHMT 2054>NP_938196 Length = 2261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2068 HSKISKHMT 2076>NP_938198 Length = 2284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2091 HSKISKHMT 2099>NP_001243256 Length = 2277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2084 HSKISKHMT 2092>NP_001243260 Length = 2232 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2039 HSKISKHMT 2047>NP_001243288 Length = 2257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2064 HSKISKHMT 2072>NP_001243253 Length = 2314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2121 HSKISKHMT 2129>NP_003250 Length = 924 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HGKVSKTL 8 HG V+KT+ Sbjct: 651 HGSVAKTV 658>XP_006722224 Length = 2244 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2051 HSKISKHMT 2059>XP_006722223 Length = 2268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 H K+SK +T Sbjct: 2075 HSKISKHMT 2083>XP_005257619 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>XP_006722070 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>XP_005257617 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>XP_005257618 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>XP_005257616 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 G +SKTLT Sbjct: 227 GVISKTLT 234>XP_005265259 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HG V +TLT Sbjct: 290 HGYVHETLT 298>NP_001273700 Length = 2490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HGK + T+T Sbjct: 1442 HGKRNNTIT 1450>NP_115593 Length = 2603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HGK + T+T Sbjct: 1555 HGKRNNTIT 1563>NP_942592 Length = 2352 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HGK + T+T Sbjct: 1304 HGKRNNTIT 1312>XP_005265728 Length = 2351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HGK + T+T Sbjct: 1303 HGKRNNTIT 1311>XP_005265724 Length = 2602 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HGK + T+T Sbjct: 1554 HGKRNNTIT 1562>NP_001269796 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 97 GKISKT 102>NP_001269800 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_001269801 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_001269799 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_001121163 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_057208 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_001269797 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_001269798 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 263 GKISKT 268>NP_060695 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 GK+ +TLT Sbjct: 474 GKLERTLT 481>NP_056083 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HG+ +TLT Sbjct: 2020 HGETLETLT 2028>XP_005251560 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKVSKTLT 9 GK+ +TLT Sbjct: 423 GKLERTLT 430>XP_005247302 Length = 2248 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HGKVSKTLT 9 HG+ +TLT Sbjct: 2025 HGETLETLT 2033>NP_899234 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 GKVSKT 7 GK+SKT Sbjct: 179 GKISKT 184Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.120 0.325 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 429,925 Number of extensions: 614 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |