Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_001242904                                                           19     869
NP_001008496                                                           19     869
NP_065996                                                              17    2528
XP_003960384                                                           17    2528
XP_005270064                                                           17    2528
XP_005270062                                                           17    2528
XP_005270061                                                           17    2528
XP_003118572                                                           17    2528
XP_003119970                                                           17    2528
NP_001254800                                                           17    3301
NP_941993                                                              17    3301
NP_940935                                                              17    3301
NP_005958                                                              17    4312
NP_219489                                                              17    4312
NP_001104251                                                           17    4312
NP_001277193                                                           17    4312
XP_005260665                                                           17    4312
XP_006723948                                                           17    4312
XP_006710934                                                           17    4312
XP_006710933                                                           17    4312
NP_001128493                                                           16    5631
NP_001128495                                                           16    5631
NP_001128494                                                           16    5631
NP_115589                                                              16    5631
NP_000928                                                              16    5631
NP_060738                                                              16    5631
XP_006714719                                                           16    5631
XP_005248609                                                           16    5631
XP_005248608                                                           16    5631
XP_006712179                                                           16    5631
XP_005264655                                                           16    5631
XP_005264654                                                           16    5631
XP_005264653                                                           16    5631
NP_005520                                                              16    7355
NP_056100                                                              16    7355
NP_443066                                                              16    7355
NP_079131                                                              16    7355
NP_065881                                                              16    7355
NP_001248755                                                           16    7355
NP_003929                                                              16    7355
XP_005260614                                                           16    7355
XP_005260613                                                           16    7355
XP_005260612                                                           16    7355
XP_005260611                                                           16    7355
XP_006722995                                                           16    7355
XP_005266731                                                           16    7355
XP_006722494                                                           16    7355
XP_005253460                                                           16    7355
XP_006719161                                                           16    7355
XP_006719160                                                           16    7355
XP_006717416                                                           16    7355
XP_005268418                                                           16    7355
XP_005268417                                                           16    7355
XP_005268416                                                           16    7355
XP_006710661                                                           16    7355
XP_005245920                                                           16    7355
XP_006710660                                                           16    7355
XP_006710659                                                           16    7355
XP_006710658                                                           16    7355
XP_006710657                                                           16    7355
XP_006710286                                                           16    7355
NP_061161                                                              16    7355
NP_060558                                                              16    7355
NP_000021                                                              15    9605
NP_001683                                                              15    9605
NP_001230526                                                           15    9605
NP_058648                                                              15    9605
NP_001007126                                                           15    9605
NP_001073933                                                           15    9605
NP_872358                                                              15    9605
NP_059115                                                              15    9605
NP_003153                                                              15    9605
NP_001254505                                                           15    9605
XP_006720200                                                           15    9605
XP_006720199                                                           15    9605
XP_006720198                                                           15    9605
XP_006720197                                                           15    9605
XP_005267647                                                           15    9605
XP_006720196                                                           15    9605
XP_006720195                                                           15    9605
XP_006720194                                                           15    9605
XP_006720193                                                           15    9605
XP_006720192                                                           15    9605
XP_006720191                                                           15    9605
XP_006720190                                                           15    9605
XP_005264576                                                           15    9605
NP_001122107                                                           15    9605
NP_001122105                                                           15    9605
NP_056487                                                              15    9605
NP_001005465                                                           15    9605
>NP_001242904
          Length = 873

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   GHLQAVTA 9
           GHLQ+VTA
Sbjct: 527 GHLQSVTA 534
>NP_001008496
          Length = 882

 Score = 18.9 bits (37), Expect =   869
 Identities = 7/8 (87%), Positives = 8/8 (100%)

Query: 2   GHLQAVTA 9
           GHLQ+VTA
Sbjct: 527 GHLQSVTA 534
>NP_065996
          Length = 3184

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    HGHLQAVT 8
            +GH QAVT
Sbjct: 2979 YGHTQAVT 2986
>XP_003960384
          Length = 884

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HGH QAV+
Sbjct: 162 HGHPQAVS 169
>XP_005270064
          Length = 1615

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    HGHLQAVT 8
            +GH QAVT
Sbjct: 1410 YGHTQAVT 1417
>XP_005270062
          Length = 3184

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    HGHLQAVT 8
            +GH QAVT
Sbjct: 2979 YGHTQAVT 2986
>XP_005270061
          Length = 3184

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    HGHLQAVT 8
            +GH QAVT
Sbjct: 2979 YGHTQAVT 2986
>XP_003118572
          Length = 884

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HGH QAV+
Sbjct: 162 HGHPQAVS 169
>XP_003119970
          Length = 884

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HGH QAV+
Sbjct: 162 HGHPQAVS 169
>NP_001254800
          Length = 234

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GHLQAVTA 9
           GHL+ VTA
Sbjct: 203 GHLEPVTA 210
>NP_941993
          Length = 181

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GHLQAVTA 9
           GHL+ VTA
Sbjct: 150 GHLEPVTA 157
>NP_940935
          Length = 315

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   GHLQAVTA 9
           GHL+ VTA
Sbjct: 284 GHLEPVTA 291
>NP_005958
          Length = 525

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GHLQAV
Sbjct: 422 GHLQAV 427
>NP_219489
          Length = 373

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GHLQAV
Sbjct: 221 GHLQAV 226
>NP_001104251
          Length = 405

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   HLQAVTA 9
           HLQ+VTA
Sbjct: 308 HLQSVTA 314
>NP_001277193
          Length = 405

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   HLQAVTA 9
           HLQ+VTA
Sbjct: 308 HLQSVTA 314
>XP_005260665
          Length = 275

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GHLQAV
Sbjct: 123 GHLQAV 128
>XP_006723948
          Length = 367

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GHLQAV
Sbjct: 215 GHLQAV 220
>XP_006710934
          Length = 465

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   HLQAVTA 9
           HLQ+VTA
Sbjct: 414 HLQSVTA 420
>XP_006710933
          Length = 511

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   HLQAVTA 9
           HLQ+VTA
Sbjct: 414 HLQSVTA 420
>NP_001128493
          Length = 381

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>NP_001128495
          Length = 381

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>NP_001128494
          Length = 381

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>NP_115589
          Length = 391

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>NP_000928
          Length = 1970

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2    GHLQAVT 8
            GHL A+T
Sbjct: 1409 GHLMAIT 1415
>NP_060738
          Length = 459

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  HGHLQAVTA 9
          +GH Q +TA
Sbjct: 81 NGHTQKITA 89
>XP_006714719
          Length = 286

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  HGHLQAVTA 9
          +GH Q +TA
Sbjct: 81 NGHTQKITA 89
>XP_005248609
          Length = 367

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  HGHLQAVTA 9
          +GH Q +TA
Sbjct: 81 NGHTQKITA 89
>XP_005248608
          Length = 401

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  HGHLQAVTA 9
          +GH Q +TA
Sbjct: 81 NGHTQKITA 89
>XP_006712179
          Length = 251

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>XP_005264655
          Length = 391

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>XP_005264654
          Length = 391

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>XP_005264653
          Length = 391

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  HGHLQAVT 8
          HG LQA+T
Sbjct: 50 HGILQALT 57
>NP_005520
          Length = 4391

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>NP_056100
          Length = 1490

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    HGHLQAVTA 9
            HGH   +TA
Sbjct: 1391 HGHKGPITA 1399
>NP_443066
          Length = 1457

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    HGHLQAVTA 9
            HGH   +TA
Sbjct: 1358 HGHKGPITA 1366
>NP_079131
          Length = 607

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GHL A+T
Sbjct: 232 GHLAAIT 238
>NP_065881
          Length = 410

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  GHLQAVTA 9
          GH  AVTA
Sbjct: 22 GHQDAVTA 29
>NP_001248755
          Length = 1215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GH+QAV
Sbjct: 516 GHIQAV 521
>NP_003929
          Length = 1153

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GH+QAV
Sbjct: 516 GHIQAV 521
>XP_005260614
          Length = 454

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GHL A+T
Sbjct: 232 GHLAAIT 238
>XP_005260613
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GHLQAVT 8
          GHL A+T
Sbjct: 86 GHLAAIT 92
>XP_005260612
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GHLQAVT 8
          GHL A+T
Sbjct: 86 GHLAAIT 92
>XP_005260611
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  GHLQAVT 8
          GHL A+T
Sbjct: 86 GHLAAIT 92
>XP_006722995
          Length = 1203

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   GHLQAV 7
           GH+QAV
Sbjct: 516 GHIQAV 521
>XP_005266731
          Length = 982

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   HGHLQAVTA 9
           HGH   +TA
Sbjct: 883 HGHKGPITA 891
>XP_006722494
          Length = 1490

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    HGHLQAVTA 9
            HGH   +TA
Sbjct: 1391 HGHKGPITA 1399
>XP_005253460
          Length = 464

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HG LQAV+
Sbjct: 248 HGLLQAVS 255
>XP_006719161
          Length = 464

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HG LQAV+
Sbjct: 248 HGLLQAVS 255
>XP_006719160
          Length = 483

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HG LQAV+
Sbjct: 267 HGLLQAVS 274
>XP_006717416
          Length = 624

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 261 HSHLQA 266

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 522 HSHLQA 527
>XP_005268418
          Length = 505

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   HGHLQAVTA 9
           HG  Q VTA
Sbjct: 402 HGRKQEVTA 410
>XP_005268417
          Length = 505

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   HGHLQAVTA 9
           HG  Q VTA
Sbjct: 402 HGRKQEVTA 410
>XP_005268416
          Length = 511

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   HGHLQAVTA 9
           HG  Q VTA
Sbjct: 408 HGRKQEVTA 416
>XP_006710661
          Length = 4057

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>XP_005245920
          Length = 4392

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>XP_006710660
          Length = 4397

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>XP_006710659
          Length = 4556

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>XP_006710658
          Length = 4563

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>XP_006710657
          Length = 4579

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  HGHLQAVT 8
          HG L AVT
Sbjct: 16 HGRLLAVT 23
>XP_006710286
          Length = 1192

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 483 HSHLQA 488

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 549 HSHLQA 554

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 572 HSHLQA 577

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 623 HSHLQA 628

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   HGHLQA 6
           H HLQA
Sbjct: 806 HSHLQA 811

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1    HGHLQA 6
            H HLQA
Sbjct: 1104 HSHLQA 1109
>NP_061161
          Length = 505

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   HGHLQAVTA 9
           HG  Q VTA
Sbjct: 402 HGRKQEVTA 410
>NP_060558
          Length = 464

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   HGHLQAVT 8
           HG LQAV+
Sbjct: 248 HGLLQAVS 255
>NP_000021
          Length = 392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   HGHLQAV 7
           HG LQA+
Sbjct: 299 HGRLQAL 305
>NP_001683
          Length = 513

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3  HLQAVT 8
          H+QAVT
Sbjct: 25 HMQAVT 30
>NP_001230526
          Length = 1287

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HLQAVT 8
           H+QAVT
Sbjct: 486 HIQAVT 491
>NP_058648
          Length = 1264

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   HLQAVT 8
           H+QAVT
Sbjct: 486 HIQAVT 491
>NP_001007126
          Length = 240

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   HLQAVTA 9
           HL AVTA
Sbjct: 220 HLPAVTA 226
>NP_001073933
          Length = 573

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 445 GHTEAVT 451
>NP_872358
          Length = 895

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   GHLQAVTA 9
           GHL  VTA
Sbjct: 192 GHLGPVTA 199
>NP_059115
          Length = 505

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   HLQAVTA 9
           HLQ +TA
Sbjct: 140 HLQEITA 146
>NP_003153
          Length = 780

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   HLQAVTA 9
           HL+AVT+
Sbjct: 705 HLEAVTS 711
>NP_001254505
          Length = 1118

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   HGHLQA 6
           HG+LQA
Sbjct: 661 HGNLQA 666
>XP_006720200
          Length = 388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 238 GHTEAVT 244
>XP_006720199
          Length = 487

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 337 GHTEAVT 343
>XP_006720198
          Length = 515

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 365 GHTEAVT 371
>XP_006720197
          Length = 563

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 413 GHTEAVT 419
>XP_005267647
          Length = 579

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 445 GHTEAVT 451
>XP_006720196
          Length = 583

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 473 GHTEAVT 479
>XP_006720195
          Length = 595

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 445 GHTEAVT 451
>XP_006720194
          Length = 600

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 473 GHTEAVT 479
>XP_006720193
          Length = 601

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 473 GHTEAVT 479
>XP_006720192
          Length = 607

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 473 GHTEAVT 479
>XP_006720191
          Length = 609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 473 GHTEAVT 479
>XP_006720190
          Length = 623

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   GHLQAVT 8
           GH +AVT
Sbjct: 473 GHTEAVT 479
>XP_005264576
          Length = 743

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   HLQAVTA 9
           HL+AVT+
Sbjct: 668 HLEAVTS 674
>NP_001122107
          Length = 1639

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    HLQAVTA 9
            HLQ VTA
Sbjct: 1000 HLQNVTA 1006
>NP_001122105
          Length = 1639

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    HLQAVTA 9
            HLQ VTA
Sbjct: 1000 HLQNVTA 1006
>NP_056487
          Length = 1639

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3    HLQAVTA 9
            HLQ VTA
Sbjct: 1000 HLQNVTA 1006
>NP_001005465
          Length = 313

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   HGHLQAV 7
           HG LQA+
Sbjct: 156 HGALQAI 162
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.321    0.125    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 549,252
Number of extensions: 656
Number of successful extensions: 96
Number of sequences better than 10000.0: 90
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 96
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.0 bits)
S2: 28 (15.4 bits)

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