Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 20 390 NP_001185763 20 390 NP_055459 20 390 XP_006726436 20 390 XP_006726410 20 390 XP_006711784 20 390 XP_006711719 20 390 XP_006711718 20 390 XP_006711717 20 390 XP_006711716 20 390 XP_006711715 20 390 XP_006711714 20 390 XP_006711713 20 390 XP_006711712 20 390 XP_006711711 20 390 XP_006711710 20 390 XP_006711709 20 390 XP_005277503 20 390 XP_005273038 20 390 XP_006711708 20 390 XP_005277500 20 390 XP_006711707 20 390 XP_005277499 20 390 XP_006711706 20 390 XP_006711705 20 390 XP_006711164 20 390 XP_005276114 20 390 XP_006710122 20 390 NP_001139182 16 5631 NP_001278257 16 5631 NP_003156 16 5631 NP_060631 16 5631 NP_001027392 16 5631 NP_002379 16 7355 NP_001257401 16 7355 NP_005326 16 7355 NP_000709 16 7355 NP_001230741 16 7355 XP_006721061 16 7355 XP_006710064 16 7355 NP_001277189 15 9605 NP_055968 15 9605 NP_872407 15 9605 NP_055105 15 9605 NP_001277188 15 9605 NP_001171655 15 9605 NP_000346 15 9605 XP_006717089 15 9605 XP_006717088 15 9605 XP_005248759 15 9605 XP_006715489 15 9605 XP_005248758 15 9605 NP_066960 15 9605>NP_001185761 Length = 2240 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2216 HDVLKKART 2224>NP_001185763 Length = 2362 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2322 HDVLKKART 2330>NP_055459 Length = 2346 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2322 HDVLKKART 2330>XP_006726436 Length = 178 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 100 HDVLKKART 108>XP_006726410 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2063 HDVLKKART 2071>XP_006711784 Length = 178 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 100 HDVLKKART 108>XP_006711719 Length = 2302 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2278 HDVLKKART 2286>XP_006711718 Length = 1436 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 1329 HDVLKKART 1337>XP_006711717 Length = 2385 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2278 HDVLKKART 2286>XP_006711716 Length = 2411 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2387 HDVLKKART 2395>XP_006711715 Length = 2428 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2321 HDVLKKART 2329>XP_006711714 Length = 2429 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2322 HDVLKKART 2330>XP_006711713 Length = 2432 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2325 HDVLKKART 2333>XP_006711712 Length = 2473 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2366 HDVLKKART 2374>XP_006711711 Length = 2482 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2375 HDVLKKART 2383>XP_006711710 Length = 2494 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2387 HDVLKKART 2395>XP_006711709 Length = 2495 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2388 HDVLKKART 2396>XP_005277503 Length = 2498 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2485 HDVLKKART 2493>XP_005273038 Length = 2509 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2485 HDVLKKART 2493>XP_006711708 Length = 2512 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2405 HDVLKKART 2413>XP_005277500 Length = 2525 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2485 HDVLKKART 2493>XP_006711707 Length = 2553 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2446 HDVLKKART 2454>XP_005277499 Length = 2561 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2485 HDVLKKART 2493>XP_006711706 Length = 2591 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2484 HDVLKKART 2492>XP_006711705 Length = 2592 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2485 HDVLKKART 2493>XP_006711164 Length = 2087 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 2063 HDVLKKART 2071>XP_005276114 Length = 134 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 70 HDVLKKART 78>XP_006710122 Length = 126 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDVLKKAMT 9 HDVLKKA T Sbjct: 100 HDVLKKART 108>NP_001139182 Length = 324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HDVLKKA 7 HD LKKA Sbjct: 154 HDPLKKA 160>NP_001278257 Length = 187 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 HDVLKKA 7 HD LKKA Sbjct: 17 HDPLKKA 23>NP_003156 Length = 603 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDVLKK 6 HDV+KK Sbjct: 16 HDVIKK 21>NP_060631 Length = 706 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HDVLKKAMT 9 H VL+KA T Sbjct: 203 HQVLRKANT 211>NP_001027392 Length = 594 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDVLKK 6 HDV+KK Sbjct: 16 HDVIKK 21>NP_002379 Length = 853 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDVLKKAM 8 HD +KKA+ Sbjct: 355 HDYVKKAI 362>NP_001257401 Length = 818 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDVLKKAM 8 HD +KKA+ Sbjct: 320 HDYVKKAI 327>NP_005326 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDVLKK 6 HDVL+K Sbjct: 65 HDVLRK 70>NP_000709 Length = 2339 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLKKAMT 9 DVLK+A T Sbjct: 414 DVLKRAAT 421>NP_001230741 Length = 2237 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLKKAMT 9 DVLK+A T Sbjct: 414 DVLKRAAT 421>XP_006721061 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDVLKKAM 8 HD LK+A+ Sbjct: 280 HDPLKRAL 287>XP_006710064 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDVLKKAM 8 HD LK+A+ Sbjct: 280 HDPLKRAL 287>NP_001277189 Length = 736 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 H VLKK + Sbjct: 573 HSVLKKTL 580>NP_055968 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 H VLKK + Sbjct: 573 HSVLKKTL 580>NP_872407 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HDVLKKA 7 HDV K+A Sbjct: 420 HDVAKRA 426>NP_055105 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DVLKKAM 8 DV+KK+M Sbjct: 883 DVIKKSM 889>NP_001277188 Length = 1951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 H VLKK + Sbjct: 485 HSVLKKTL 492>NP_001171655 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVLKKA 7 DVLKKA Sbjct: 330 DVLKKA 335>NP_000346 Length = 427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DVLKKA 7 DVLKKA Sbjct: 357 DVLKKA 362>XP_006717089 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DVLKKAM 8 DV+KK+M Sbjct: 438 DVIKKSM 444>XP_006717088 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DVLKKAM 8 DV+KK+M Sbjct: 809 DVIKKSM 815>XP_005248759 Length = 1951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 H VLKK + Sbjct: 485 HSVLKKTL 492>XP_006715489 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 H VLKK + Sbjct: 573 HSVLKKTL 580>XP_005248758 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 H VLKK + Sbjct: 573 HSVLKKTL 580>NP_066960 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HDVLKKAM 8 HD + KAM Sbjct: 49 HDTMLKAM 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.125 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,121 Number of extensions: 648 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |