Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 18 1135 XP_006716142 18 1135 XP_005250088 18 1135 XP_006716141 18 1135 XP_005250085 18 1135 XP_006716140 18 1135 XP_005250084 18 1135 XP_005250083 18 1135 XP_005250082 18 1135 NP_064562 17 4312 XP_005272092 17 4312 NP_061178 17 4312 NP_001001670 16 7355 NP_997299 16 7355 NP_001138669 16 7355 XP_005276416 16 7355 XP_005273137 16 7355 NP_036427 15 9605 NP_001186210 15 9605 XP_006724247 15 9605 XP_006724246 15 9605 XP_006724245 15 9605 XP_006724244 15 9605 XP_006724243 15 9605 XP_005261477 15 9605 XP_005261476 15 9605 XP_005261474 15 9605 XP_006724242 15 9605 XP_005261473 15 9605 XP_005261472 15 9605>NP_733751 Length = 4911 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4185 HGIAESAAL 4193>XP_006716142 Length = 4927 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4201 HGIAESAAL 4209>XP_005250088 Length = 4928 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4202 HGIAESAAL 4210>XP_006716141 Length = 4959 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4233 HGIAESAAL 4241>XP_005250085 Length = 4979 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4257 HGIAESAAL 4265>XP_006716140 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4256 HGIAESAAL 4264>XP_005250084 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4256 HGIAESAAL 4264>XP_005250083 Length = 4982 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4256 HGIAESAAL 4264>XP_005250082 Length = 4983 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HDIAESAAL 9 H IAESAAL Sbjct: 4257 HGIAESAAL 4265>NP_064562 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HDIAESAAL 9 HD AES +L Sbjct: 187 HDCAESGSL 195>XP_005272092 Length = 617 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HDIAESAAL 9 HD AES +L Sbjct: 187 HDCAESGSL 195>NP_061178 Length = 669 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 HDIAESAAL 9 HD AES +L Sbjct: 188 HDCAESGSL 196>NP_001001670 Length = 1576 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDIAES 6 HD+AES Sbjct: 462 HDLAES 467>NP_997299 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDIAES 6 HD+AES Sbjct: 459 HDLAES 464>NP_001138669 Length = 917 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDIAES 6 HD+AES Sbjct: 459 HDLAES 464>XP_005276416 Length = 1583 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HDIAES 6 HD+AES Sbjct: 448 HDLAES 453>XP_005273137 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 DIAESAAL 9 D+AE+AAL Sbjct: 27 DMAEAAAL 34>NP_036427 Length = 2220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>NP_001186210 Length = 2220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_006724247 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_006724246 Length = 2103 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_006724245 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_006724244 Length = 2191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_006724243 Length = 2196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_005261477 Length = 2200 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_005261476 Length = 2210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 179 HDVSVSAA 186>XP_005261474 Length = 2225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_006724242 Length = 2226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_005261473 Length = 2250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231>XP_005261472 Length = 2255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HDIAESAA 8 HD++ SAA Sbjct: 224 HDVSVSAA 231Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.119 0.305 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 265,323 Number of extensions: 208 Number of successful extensions: 30 Number of sequences better than 10000.0: 30 Number of HSP's gapped: 30 Number of HSP's successfully gapped: 30 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |