Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 21 175 NP_001035957 21 175 XP_006721991 21 175 XP_006721990 21 175 XP_006721989 21 175 XP_005258041 21 175 XP_006721988 21 175 XP_006721987 21 175 XP_006721986 21 175 XP_005258040 21 175 XP_006721985 21 175 NP_001244935 17 2528 NP_057213 17 2528 XP_006714215 17 3301 XP_006714214 17 3301 XP_005262915 17 3301 NP_055806 17 3301 NP_001274426 17 4312 NP_071929 17 4312 NP_998814 17 4312 XP_005269584 17 4312 XP_005269583 17 4312 XP_006717688 17 4312 XP_005269582 17 4312 XP_005250584 17 4312 NP_001444 16 7355 NP_950252 16 7355 NP_001124146 16 7355 NP_001210 16 7355 NP_001186602 16 7355 NP_001186601 16 7355 NP_001186600 16 7355 NP_004668 16 7355 XP_006716114 16 7355 XP_005245180 16 7355 XP_005245177 16 7355 XP_005245176 16 7355 XP_005245175 16 7355 XP_005245174 16 7355 NP_001008405 16 7355 NP_001002906 16 7355 NP_149080 16 7355 NP_001558 15 9605 NP_085139 15 9605 XP_006725418 15 9605 XP_006725417 15 9605 XP_006725414 15 9605 XP_005261298 15 9605 XP_005261296 15 9605 XP_005261295 15 9605 XP_005257754 15 9605 XP_005257753 15 9605 XP_006722170 15 9605 XP_006718600 15 9605 XP_006718599 15 9605 XP_006718598 15 9605 XP_006718597 15 9605 XP_005274036 15 9605 XP_005274035 15 9605 NP_036497 15 9605 NP_001001659 15 9605>NP_000258 Length = 2818 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1143 HCTVLAMS 1150>NP_001035957 Length = 2839 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1143 HCTVLAMS 1150>XP_006721991 Length = 1632 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1153 HCTVLAMS 1160>XP_006721990 Length = 2823 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1153 HCTVLAMS 1160>XP_006721989 Length = 2823 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1153 HCTVLAMS 1160>XP_005258041 Length = 2836 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1143 HCTVLAMS 1150>XP_006721988 Length = 2846 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1153 HCTVLAMS 1160>XP_006721987 Length = 2849 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1153 HCTVLAMS 1160>XP_006721986 Length = 2854 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1140 HCTVLAMS 1147>XP_005258040 Length = 2857 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1143 HCTVLAMS 1150>XP_006721985 Length = 2867 Score = 21.2 bits (43), Expect = 175 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 HCTVLAMS 8 HCTVLAMS Sbjct: 1153 HCTVLAMS 1160>NP_001244935 Length = 352 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HCTVLA 6 HCT+LA Sbjct: 231 HCTILA 236>NP_057213 Length = 406 Score = 17.3 bits (33), Expect = 2528 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HCTVLA 6 HCT+LA Sbjct: 231 HCTILA 236>XP_006714215 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HCTVLAM 7 HC+++AM Sbjct: 495 HCSIIAM 501>XP_006714214 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HCTVLAM 7 HC+++AM Sbjct: 495 HCSIIAM 501>XP_005262915 Length = 3544 Score = 16.9 bits (32), Expect = 3301 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HCTVLAM 7 HC+++AM Sbjct: 495 HCSIIAM 501>NP_055806 Length = 3526 Score = 16.9 bits (32), Expect = 3301 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HCTVLAM 7 HC+++AM Sbjct: 477 HCSIIAM 483>NP_001274426 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HCTVLAMSK 9 HC LAM++ Sbjct: 11 HCLYLAMTR 19>NP_071929 Length = 697 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HCTVLAMSK 9 HC LAM++ Sbjct: 11 HCLYLAMTR 19>NP_998814 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 CTVLAM 7 CTVLAM Sbjct: 291 CTVLAM 296>XP_005269584 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 CTVLAM 7 CTVLAM Sbjct: 175 CTVLAM 180>XP_005269583 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 CTVLAM 7 CTVLAM Sbjct: 175 CTVLAM 180>XP_006717688 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 CTVLAM 7 CTVLAM Sbjct: 291 CTVLAM 296>XP_005269582 Length = 328 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 CTVLAM 7 CTVLAM Sbjct: 282 CTVLAM 287>XP_005250584 Length = 430 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HCTVLAMSK 9 HC LAM++ Sbjct: 11 HCLYLAMTR 19>NP_001444 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HCTVLAMS 8 HC + AMS Sbjct: 394 HCNLQAMS 401>NP_950252 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HCTVLAMS 8 HC VLA++ Sbjct: 26 HCWVLAVA 33>NP_001124146 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTVLAMSK 9 CT A+SK Sbjct: 13 CTAFALSK 20>NP_001210 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTVLAMSK 9 CT A+SK Sbjct: 13 CTAFALSK 20>NP_001186602 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTVLAMSK 9 CT A+SK Sbjct: 13 CTAFALSK 20>NP_001186601 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTVLAMSK 9 CT A+SK Sbjct: 21 CTAFALSK 28>NP_001186600 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 CTVLAMSK 9 CT A+SK Sbjct: 21 CTAFALSK 28>NP_004668 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HCTVLAM 7 HC +LA+ Sbjct: 22 HCNILAI 28>XP_006716114 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C V+A+SK Sbjct: 312 CIVMALSK 319>XP_005245180 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HCTVLAMS 8 HC VLA++ Sbjct: 26 HCWVLAVA 33>XP_005245177 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HCTVLAMS 8 HC VLA++ Sbjct: 26 HCWVLAVA 33>XP_005245176 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HCTVLAMS 8 HC VLA++ Sbjct: 26 HCWVLAVA 33>XP_005245175 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HCTVLAMS 8 HC VLA++ Sbjct: 26 HCWVLAVA 33>XP_005245174 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 HCTVLAMS 8 HC VLA++ Sbjct: 26 HCWVLAVA 33>NP_001008405 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C V+A+SK Sbjct: 312 CIVMALSK 319>NP_001002906 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 HCTVLAM 7 HC +LA+ Sbjct: 22 HCNILAI 28>NP_149080 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HCTVLAM 7 HC VLA+ Sbjct: 276 HCDVLAV 282>NP_001558 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1121 CSVLQMAK 1128>NP_085139 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 531 HCPVLA 536>XP_006725418 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 31 HCQVLA 36>XP_006725417 Length = 725 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 31 HCQVLA 36>XP_006725414 Length = 1034 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 340 HCQVLA 345>XP_005261298 Length = 399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTVLAMS 8 CT+LA S Sbjct: 383 CTILARS 389>XP_005261296 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTVLAMS 8 CT+LA S Sbjct: 400 CTILARS 406>XP_005261295 Length = 435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 CTVLAMS 8 CT+LA S Sbjct: 419 CTILARS 425>XP_005257754 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 31 HCQVLA 36>XP_005257753 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 31 HCQVLA 36>XP_006722170 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HCTVLA 6 HC VLA Sbjct: 340 HCQVLA 345>XP_006718600 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1022 CSVLQMAK 1029>XP_006718599 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1022 CSVLQMAK 1029>XP_006718598 Length = 1206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1143 CSVLQMAK 1150>XP_006718597 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1121 CSVLQMAK 1128>XP_005274036 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1143 CSVLQMAK 1150>XP_005274035 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CTVLAMSK 9 C+VL M+K Sbjct: 1143 CSVLQMAK 1150>NP_036497 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CTVLAMS 8 CTVLA++ Sbjct: 141 CTVLAVT 147>NP_001001659 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 CTVLAMS 8 CTVLA++ Sbjct: 140 CTVLAVA 146Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.123 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 386,974 Number of extensions: 383 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |