Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_071325 18 1135 NP_998778 18 1135 XP_006713920 18 1135 XP_006713919 18 1135 NP_001030022 18 1935 NP_733751 18 1935 NP_061873 18 1935 XP_006716142 18 1935 XP_005250088 18 1935 XP_006716141 18 1935 XP_005250085 18 1935 XP_006716140 18 1935 XP_005250084 18 1935 XP_005250083 18 1935 XP_005250082 18 1935 XP_005248369 18 1935 NP_000103 17 3301 NP_149078 17 3301 NP_001129586 16 5631 NP_001129585 16 5631 NP_001070833 16 5631 NP_009102 16 5631 NP_001070834 16 5631 NP_612154 16 5631 NP_060876 16 5631 NP_004523 16 5631 NP_001193555 16 5631 XP_006716995 16 5631 XP_005272216 16 5631 XP_005272215 16 5631 XP_005272213 16 5631 NP_892006 16 7355 NP_149062 16 7355 XP_006715488 16 7355 XP_006715487 16 7355 XP_006715486 16 7355 XP_006715485 16 7355 XP_006715484 16 7355 XP_006715483 16 7355 XP_006715482 16 7355 XP_006715481 16 7355 XP_006715480 16 7355 XP_006715479 16 7355 XP_006715478 16 7355 XP_006715477 16 7355 XP_006715476 16 7355 XP_006715475 16 7355 XP_006715474 16 7355 XP_006715473 16 7355 XP_006715472 16 7355 XP_006715471 16 7355 XP_006715470 16 7355 NP_004095 15 9605 NP_612396 15 9605 NP_006090 15 9605 XP_006722242 15 9605 XP_006713675 15 9605 XP_005247475 15 9605 XP_005247474 15 9605>NP_071325 Length = 701 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HCIAESAAL 9 HC A SAAL Sbjct: 391 HCFATSAAL 399>NP_998778 Length = 701 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HCIAESAAL 9 HC A SAAL Sbjct: 391 HCFATSAAL 399>XP_006713920 Length = 701 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HCIAESAAL 9 HC A SAAL Sbjct: 391 HCFATSAAL 399>XP_006713919 Length = 701 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 HCIAESAAL 9 HC A SAAL Sbjct: 391 HCFATSAAL 399>NP_001030022 Length = 497 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HCIAES 6 HCIAES Sbjct: 169 HCIAES 174>NP_733751 Length = 4911 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4185 HGIAESAAL 4193>NP_061873 Length = 356 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HCIAES 6 HCIAES Sbjct: 28 HCIAES 33>XP_006716142 Length = 4927 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4201 HGIAESAAL 4209>XP_005250088 Length = 4928 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4202 HGIAESAAL 4210>XP_006716141 Length = 4959 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4233 HGIAESAAL 4241>XP_005250085 Length = 4979 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4257 HGIAESAAL 4265>XP_006716140 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4256 HGIAESAAL 4264>XP_005250084 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4256 HGIAESAAL 4264>XP_005250083 Length = 4982 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4256 HGIAESAAL 4264>XP_005250082 Length = 4983 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 HCIAESAAL 9 H IAESAAL Sbjct: 4257 HGIAESAAL 4265>XP_005248369 Length = 375 Score = 17.7 bits (34), Expect = 1935 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 HCIAES 6 HCIAES Sbjct: 47 HCIAES 52>NP_000103 Length = 739 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC SAAL Sbjct: 432 HCFTTSAAL 440>NP_149078 Length = 416 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC AES L Sbjct: 58 HCFAESREL 66>NP_001129586 Length = 608 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 13 HCAAMGAAL 21>NP_001129585 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 130 HCAAMGAAL 138>NP_001070833 Length = 725 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 130 HCAAMGAAL 138>NP_009102 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 130 HCAAMGAAL 138>NP_001070834 Length = 671 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 76 HCAAMGAAL 84>NP_612154 Length = 1125 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC AES L Sbjct: 748 HCNAESQCL 756>NP_060876 Length = 5412 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC AES L Sbjct: 5035 HCNAESQCL 5043>NP_004523 Length = 1176 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC AES L Sbjct: 799 HCNAESQCL 807>NP_001193555 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 HCIAESAA 8 HC ESAA Sbjct: 126 HCPIESAA 133>XP_006716995 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 13 HCAAMGAAL 21>XP_005272216 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 13 HCAAMGAAL 21>XP_005272215 Length = 693 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 76 HCAAMGAAL 84>XP_005272213 Length = 747 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC A AAL Sbjct: 130 HCAAMGAAL 138>NP_892006 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1625 CVQEAAAL 1632>NP_149062 Length = 8749 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715488 Length = 8721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715487 Length = 8744 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715486 Length = 8758 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715485 Length = 8793 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1579 CVQEAAAL 1586>XP_006715484 Length = 8794 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715483 Length = 8795 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715482 Length = 8797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1625 CVQEAAAL 1632>XP_006715481 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1585 CVQEAAAL 1592>XP_006715480 Length = 8799 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715479 Length = 8804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715478 Length = 8809 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715477 Length = 8822 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1608 CVQEAAAL 1615>XP_006715476 Length = 8823 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715475 Length = 8827 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715474 Length = 8829 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1615 CVQEAAAL 1622>XP_006715473 Length = 8832 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715472 Length = 8839 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1625 CVQEAAAL 1632>XP_006715471 Length = 8842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>XP_006715470 Length = 8846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C+ E+AAL Sbjct: 1632 CVQEAAAL 1639>NP_004095 Length = 2511 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 CIAESAAL 9 C++E AAL Sbjct: 1127 CLSERAAL 1134>NP_612396 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC+ AAL Sbjct: 114 HCMITGAAL 122>NP_006090 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC SAA+ Sbjct: 467 HCSVTSAAI 475>XP_006722242 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 HCIAESAAL 9 HC+ AAL Sbjct: 114 HCMITGAAL 122>XP_006713675 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CIAESA 7 C+AESA Sbjct: 3 CLAESA 8>XP_005247475 Length = 699 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CIAESA 7 C+AESA Sbjct: 3 CLAESA 8>XP_005247474 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 CIAESA 7 C+AESA Sbjct: 3 CLAESA 8Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.325 0.123 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 398,319 Number of extensions: 481 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |