Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 19 665 NP_671714 19 665 XP_006715890 19 665 XP_005250160 19 665 XP_005250159 19 665 NP_055289 17 3301 NP_741983 16 5631 XP_005273510 16 5631 XP_005273509 16 5631 XP_005273508 16 5631 NP_001609 16 7355 NP_116265 16 7355 NP_001276026 16 7355 NP_001139447 16 7355 NP_003975 16 7355 XP_006722228 16 7355 NP_060552 15 9605 NP_001165402 15 9605 NP_001186329 15 9605 NP_001165401 15 9605 NP_001186327 15 9605 NP_001186326 15 9605 NP_001186328 15 9605 NP_071407 15 9605 NP_036356 15 9605 NP_001154180 15 9605 NP_004362 15 9605 NP_001093869 15 9605 NP_001091868 15 9605 NP_149095 15 9605 NP_001243359 15 9605 NP_060506 15 9605 NP_003562 15 9605 NP_001276863 15 9605 XP_006720344 15 9605 XP_006720343 15 9605 XP_006720342 15 9605 XP_006720250 15 9605 XP_006718005 15 9605 XP_006718004 15 9605 XP_006718003 15 9605 XP_006714291 15 9605 XP_006714290 15 9605 XP_005262709 15 9605 XP_005275746 15 9605 XP_003403671 15 9605 XP_006710003 15 9605>NP_005742 Length = 3907 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HAVLDRMAE 9 +AVLDRMAE Sbjct: 608 NAVLDRMAE 616>NP_671714 Length = 3899 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HAVLDRMAE 9 +AVLDRMAE Sbjct: 608 NAVLDRMAE 616>XP_006715890 Length = 3860 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HAVLDRMAE 9 +AVLDRMAE Sbjct: 608 NAVLDRMAE 616>XP_005250160 Length = 3939 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HAVLDRMAE 9 +AVLDRMAE Sbjct: 608 NAVLDRMAE 616>XP_005250159 Length = 3952 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 HAVLDRMAE 9 +AVLDRMAE Sbjct: 608 NAVLDRMAE 616>NP_055289 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 HAVLDRMA 8 H VLDR+A Sbjct: 376 HTVLDRIA 383>NP_741983 Length = 493 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVLDRMAE 9 A+LD MAE Sbjct: 204 AILDAMAE 211>XP_005273510 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVLDRMAE 9 A+LD MAE Sbjct: 172 AILDAMAE 179>XP_005273509 Length = 298 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVLDRMAE 9 A+LD MAE Sbjct: 204 AILDAMAE 211>XP_005273508 Length = 461 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVLDRMAE 9 A+LD MAE Sbjct: 172 AILDAMAE 179>NP_001609 Length = 1014 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 AVLDRMAE 9 A+LDR+A+ Sbjct: 278 AILDRVAD 285>NP_116265 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HAVLDRM 7 HA LDR+ Sbjct: 208 HAALDRL 214>NP_001276026 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HAVLDRM 7 HA LDR+ Sbjct: 208 HAALDRL 214>NP_001139447 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HAVLDRM 7 HAVLD++ Sbjct: 202 HAVLDQL 208>NP_003975 Length = 592 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HAVLDRM 7 HAVLD++ Sbjct: 153 HAVLDQL 159>XP_006722228 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 HAVLDRM 7 HAVLD++ Sbjct: 109 HAVLDQL 115>NP_060552 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HAVLDRM 7 H VLD+M Sbjct: 1014 HMVLDKM 1020>NP_001165402 Length = 1061 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 837 HAMLDR 842>NP_001186329 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 447 HAIFDQMQQ 455>NP_001165401 Length = 1381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 837 HAMLDR 842>NP_001186327 Length = 1242 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 447 HAIFDQMQQ 455>NP_001186326 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 447 HAIFDQMQQ 455>NP_001186328 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 422 HAIFDQMQQ 430>NP_071407 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 837 HAMLDR 842>NP_036356 Length = 1258 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 447 HAIFDQMQQ 455>NP_001154180 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 HAVLDRM 7 H VLD+M Sbjct: 956 HMVLDKM 962>NP_004362 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVLDRM 7 AVLDRM Sbjct: 427 AVLDRM 432>NP_001093869 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA + +MAE Sbjct: 1047 HAFMKKMAE 1055>NP_001091868 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 AVLDRM 7 AVLDRM Sbjct: 427 AVLDRM 432>NP_149095 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HAV DR+ + Sbjct: 543 HAVQDRLMD 551>NP_001243359 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HAV DR+ + Sbjct: 543 HAVQDRLMD 551>NP_060506 Length = 2078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HAVLDRMA 8 H++L+R+A Sbjct: 858 HSILERIA 865>NP_003562 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 406 HALLDR 411>NP_001276863 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 646 HALLDR 651>XP_006720344 Length = 702 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HAV DR+ + Sbjct: 340 HAVQDRLMD 348>XP_006720343 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HAV DR+ + Sbjct: 389 HAVQDRLMD 397>XP_006720342 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HAV DR+ + Sbjct: 543 HAVQDRLMD 551>XP_006720250 Length = 2077 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 HAVLDRMA 8 H++L+R+A Sbjct: 857 HSILERIA 864>XP_006718005 Length = 3397 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 880 HAMLDR 885>XP_006718004 Length = 3399 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 882 HAMLDR 887>XP_006718003 Length = 3419 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 902 HAMLDR 907>XP_006714291 Length = 1227 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 447 HAIFDQMQQ 455>XP_006714290 Length = 1269 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA+ D+M + Sbjct: 430 HAIFDQMQQ 438>XP_005262709 Length = 1337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 HAVLDRMAE 9 HA + +MAE Sbjct: 1047 HAFMKKMAE 1055>XP_005275746 Length = 3352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 835 HAMLDR 840>XP_003403671 Length = 3354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 837 HAMLDR 842>XP_006710003 Length = 3374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 HAVLDR 6 HA+LDR Sbjct: 857 HAMLDR 862Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.130 0.360 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,089 Number of extensions: 723 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |