Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001263627 18 1935 NP_001263628 18 1935 NP_001263626 18 1935 NP_064581 18 1935 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 NP_001193976 16 7355 NP_001484 16 7355 NP_647537 16 7355 NP_647538 16 7355 NP_001485 16 7355 NP_001108628 16 7355 XP_005260918 16 7355 XP_005260917 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_997186 15 9605 NP_001263211 15 9605 NP_064506 15 9605 NP_038464 15 9605 NP_995314 15 9605 XP_006712264 15 9605 XP_006712263 15 9605 NP_612455 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 159 AMAIYKQS 166>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 120 AMAIYKQS 127>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 27 AMAIYKQS 34>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 27 AMAIYKQS 34>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 AMAIYKQS 9 AMAIYKQS Sbjct: 27 AMAIYKQS 34>NP_001263627 Length = 182 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 MAIYKQS Sbjct: 1 MAIYKQS 7>NP_001263628 Length = 187 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 MAIYKQS Sbjct: 1 MAIYKQS 7>NP_001263626 Length = 234 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 MAIYKQS Sbjct: 1 MAIYKQS 7>NP_064581 Length = 855 Score = 17.7 bits (34), Expect = 1935 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 HAMAIYKQS 9 HAMA+Y+++ Sbjct: 611 HAMAVYERA 619>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 25685 HAQAAYRQ 25692>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 25810 HAQAAYRQ 25817>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 33109 HAQAAYRQ 33116>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 32182 HAQAAYRQ 32189>NP_001193976 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 H++A+YK Sbjct: 279 HSLALYK 285>NP_001484 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 HA+A+Y+ Sbjct: 187 HALALYR 193>NP_647537 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 H++A+YK Sbjct: 395 HSLALYK 401>NP_647538 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 H++A+YK Sbjct: 395 HSLALYK 401>NP_001485 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 HA+A+Y+ Sbjct: 187 HALALYR 193>NP_001108628 Length = 400 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 HA+A+Y+ Sbjct: 142 HALALYR 148>XP_005260918 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 H++A+YK Sbjct: 395 HSLALYK 401>XP_005260917 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 HAMAIYK 7 H++A+YK Sbjct: 395 HSLALYK 401>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 21422 HAQAAYRQ 21429>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 22781 HAQAAYRQ 22788>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 32737 HAQAAYRQ 32744>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 34243 HAQAAYRQ 34250>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 34750 HAQAAYRQ 34757>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 HAMAIYKQ 8 HA A Y+Q Sbjct: 25877 HAQAAYRQ 25884>NP_997186 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 HAMAIYKQS 9 H++A+Y+++ Sbjct: 358 HSLALYQEN 366>NP_001263211 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 HAMAIYKQS 9 H++A+Y+++ Sbjct: 358 HSLALYQEN 366>NP_064506 Length = 1516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 MAIYKQS 9 +AIYKQ+ Sbjct: 74 LAIYKQT 80>NP_038464 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1118 AVYKQS 1123>NP_995314 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1124 AVYKQS 1129>XP_006712264 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1116 AVYKQS 1121>XP_006712263 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AIYKQS 9 A+YKQS Sbjct: 1122 AVYKQS 1127>NP_612455 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 HAMAIY 6 HAMA Y Sbjct: 136 HAMAFY 141Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.118 0.329 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 363,988 Number of extensions: 449 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |