Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000305                                                              20     390
XP_006717989                                                           20     390
NP_001073951                                                           18    1935
NP_001004303                                                           17    2528
NP_036423                                                              17    2528
NP_112598                                                              17    2528
XP_006719768                                                           17    2528
XP_005270642                                                           17    2528
XP_006710479                                                           17    2528
XP_005270641                                                           17    2528
XP_005270640                                                           17    2528
NP_056262                                                              17    3301
NP_001242941                                                           17    3301
NP_005955                                                              17    3301
NP_001243024                                                           17    3301
XP_005256710                                                           17    3301
XP_005256709                                                           17    3301
XP_005256708                                                           17    3301
XP_005263454                                                           17    3301
XP_005263453                                                           17    3301
NP_659453                                                              17    3301
NP_001121636                                                           17    4312
NP_000323                                                              17    4312
NP_055863                                                              17    4312
XP_006719359                                                           17    4312
XP_006719358                                                           17    4312
XP_005253915                                                           17    4312
XP_005265887                                                           17    4312
NP_004937                                                              17    4312
NP_005492                                                              16    5631
NP_001035362                                                           16    5631
NP_056467                                                              16    5631
NP_073746                                                              16    5631
NP_937872                                                              16    5631
XP_006723397                                                           16    5631
XP_005259220                                                           16    5631
XP_006723396                                                           16    5631
XP_006723395                                                           16    5631
XP_006723394                                                           16    5631
XP_006723393                                                           16    5631
XP_006723392                                                           16    5631
XP_006713969                                                           16    5631
XP_006713968                                                           16    5631
NP_002917                                                              16    5631
NP_071355                                                              16    5631
NP_006484                                                              16    7355
NP_115996                                                              16    7355
NP_001258926                                                           16    7355
NP_055129                                                              16    7355
NP_001258925                                                           16    7355
NP_001258924                                                           16    7355
NP_852136                                                              16    7355
NP_073585                                                              16    7355
NP_061973                                                              16    7355
NP_001029195                                                           16    7355
NP_001029196                                                           16    7355
NP_056649                                                              16    7355
NP_056648                                                              16    7355
NP_001093143                                                           16    7355
NP_001093142                                                           16    7355
NP_001093141                                                           16    7355
NP_001093140                                                           16    7355
NP_001265721                                                           16    7355
NP_001265720                                                           16    7355
NP_001020461                                                           16    7355
NP_001026918                                                           16    7355
XP_006724019                                                           16    7355
XP_006724018                                                           16    7355
XP_006724017                                                           16    7355
XP_006724016                                                           16    7355
XP_006719421                                                           16    7355
XP_005268863                                                           16    7355
XP_005273180                                                           16    7355
XP_006710835                                                           16    7355
XP_006710834                                                           16    7355
XP_005271096                                                           16    7355
XP_005271097                                                           16    7355
XP_005271094                                                           16    7355
NP_002999                                                              16    7355
NP_060626                                                              15    9605
NP_056193                                                              15    9605
NP_001193583                                                           15    9605
NP_006303                                                              15    9605
NP_004243                                                              15    9605
NP_001070729                                                           15    9605
NP_055733                                                              15    9605
NP_061152                                                              15    9605
NP_891847                                                              15    9605
NP_005392                                                              15    9605
NP_056485                                                              15    9605
NP_003881                                                              15    9605
NP_001123553                                                           15    9605
NP_056052                                                              15    9605
NP_001095139                                                           15    9605
NP_001245335                                                           15    9605
NP_001036001                                                           15    9605
NP_001034486                                                           15    9605
NP_001265245                                                           15    9605
NP_001265244                                                           15    9605
NP_001265242                                                           15    9605
NP_067071                                                              15    9605
NP_003857                                                              15    9605
NP_002653                                                              15    9605
NP_001269251                                                           15    9605
NP_001265243                                                           15    9605
NP_001027024                                                           15    9605
XP_006723921                                                           15    9605
XP_006723920                                                           15    9605
XP_006723919                                                           15    9605
XP_006720498                                                           15    9605
XP_006718290                                                           15    9605
XP_006716112                                                           15    9605
XP_005250550                                                           15    9605
XP_006714467                                                           15    9605
XP_006714465                                                           15    9605
XP_005263379                                                           15    9605
XP_006714464                                                           15    9605
XP_006714463                                                           15    9605
XP_005247591                                                           15    9605
XP_005247590                                                           15    9605
NP_002998                                                              15    9605
NP_997327                                                              15    9605
NP_787052                                                              15    9605
>NP_000305
          Length = 403

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   GVTIPSQR 8
           GVTIPSQR
Sbjct: 165 GVTIPSQR 172
>XP_006717989
          Length = 388

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   GVTIPSQR 8
           GVTIPSQR
Sbjct: 150 GVTIPSQR 157
>NP_001073951
          Length = 976

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GVTIPSQRH 9
           G+T+P  RH
Sbjct: 224 GLTVPGPRH 232
>NP_001004303
          Length = 728

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TIPSQRH 9
           T+PSQ+H
Sbjct: 193 TLPSQKH 199
>NP_036423
          Length = 2120

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GVTIPSQRH 9
            G+T+PS  H
Sbjct: 1882 GLTVPSNSH 1890
>NP_112598
          Length = 5088

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GVTIPSQR 8
            GVT+PS R
Sbjct: 1901 GVTVPSTR 1908
>XP_006719768
          Length = 2120

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GVTIPSQRH 9
            G+T+PS  H
Sbjct: 1882 GLTVPSNSH 1890
>XP_005270642
          Length = 569

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TIPSQRH 9
           T+PSQ+H
Sbjct: 193 TLPSQKH 199
>XP_006710479
          Length = 598

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3  TIPSQRH 9
          T+PSQ+H
Sbjct: 63 TLPSQKH 69
>XP_005270641
          Length = 620

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TIPSQRH 9
           T+PSQ+H
Sbjct: 193 TLPSQKH 199
>XP_005270640
          Length = 698

 Score = 17.3 bits (33), Expect =  2528
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TIPSQRH 9
           T+PSQ+H
Sbjct: 193 TLPSQKH 199
>NP_056262
          Length = 1602

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G  IP QRH
Sbjct: 434 GEDIPDQRH 442
>NP_001242941
          Length = 2007

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          V IPS+RH
Sbjct: 36 VWIPSERH 43
>NP_005955
          Length = 1976

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          V IPS+RH
Sbjct: 36 VWIPSERH 43
>NP_001243024
          Length = 1985

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          V IPS+RH
Sbjct: 36 VWIPSERH 43
>XP_005256710
          Length = 1986

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          V IPS+RH
Sbjct: 36 VWIPSERH 43
>XP_005256709
          Length = 1997

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          V IPS+RH
Sbjct: 36 VWIPSERH 43
>XP_005256708
          Length = 2007

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          V IPS+RH
Sbjct: 36 VWIPSERH 43
>XP_005263454
          Length = 1324

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G  IP QRH
Sbjct: 156 GEDIPDQRH 164
>XP_005263453
          Length = 1613

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G  IP QRH
Sbjct: 445 GEDIPDQRH 453
>NP_659453
          Length = 294

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T+P  RH
Sbjct: 226 GYTVPKYRH 234
>NP_001121636
          Length = 815

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   GVTIPSQR 8
           G T PSQR
Sbjct: 164 GATTPSQR 171
>NP_000323
          Length = 815

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   GVTIPSQR 8
           G T PSQR
Sbjct: 164 GATTPSQR 171
>NP_055863
          Length = 1923

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    GVTIPSQRH 9
            G++IP+Q H
Sbjct: 1737 GMSIPAQPH 1745
>XP_006719359
          Length = 1966

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    GVTIPSQRH 9
            G++IP+Q H
Sbjct: 1780 GMSIPAQPH 1788
>XP_006719358
          Length = 1966

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    GVTIPSQRH 9
            G++IP+Q H
Sbjct: 1780 GMSIPAQPH 1788
>XP_005253915
          Length = 1966

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    GVTIPSQRH 9
            G++IP+Q H
Sbjct: 1780 GMSIPAQPH 1788
>XP_005265887
          Length = 939

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           +T+PS RH
Sbjct: 566 LTLPSYRH 573
>NP_004937
          Length = 1830

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           +T+PS RH
Sbjct: 566 LTLPSYRH 573
>NP_005492
          Length = 1066

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1    GVTIPSQRH 9
            G T+P+++H
Sbjct: 1046 GSTLPTKKH 1054
>NP_001035362
          Length = 1762

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1    GVTIPSQR 8
            G+T+PS++
Sbjct: 1641 GITLPSEQ 1648
>NP_056467
          Length = 1247

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           +TIP+ RH
Sbjct: 236 LTIPAPRH 243
>NP_073746
          Length = 1386

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 382 LTIPKHRH 389
>NP_937872
          Length = 1447

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           G+T PSQR
Sbjct: 636 GLTQPSQR 643
>XP_006723397
          Length = 1327

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 323 LTIPKHRH 330
>XP_005259220
          Length = 1386

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 382 LTIPKHRH 389
>XP_006723396
          Length = 1386

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 382 LTIPKHRH 389
>XP_006723395
          Length = 1387

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 383 LTIPKHRH 390
>XP_006723394
          Length = 1406

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 402 LTIPKHRH 409
>XP_006723393
          Length = 1406

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 402 LTIPKHRH 409
>XP_006723392
          Length = 1406

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           +TIP  RH
Sbjct: 402 LTIPKHRH 409
>XP_006713969
          Length = 1157

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           G+T PSQR
Sbjct: 636 GLTQPSQR 643
>XP_006713968
          Length = 1447

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           G+T PSQR
Sbjct: 636 GLTQPSQR 643
>NP_002917
          Length = 1376

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           G+T PSQR
Sbjct: 636 GLTQPSQR 643
>NP_071355
          Length = 340

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   IPSQRH 9
           IPS+RH
Sbjct: 100 IPSERH 105
>NP_006484
          Length = 407

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   IPSQRH 9
           IPS+RH
Sbjct: 96  IPSRRH 101
>NP_115996
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   GVTIPSQ 7
           G+T+P+Q
Sbjct: 227 GITLPTQ 233
>NP_001258926
          Length = 337

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   GVTIPSQ 7
           G+T+P+Q
Sbjct: 227 GITLPTQ 233
>NP_055129
          Length = 925

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 8/8 (100%)

Query: 1   GVTIPSQR 8
           G+T+P+Q+
Sbjct: 672 GMTLPAQK 679
>NP_001258925
          Length = 459

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   GVTIPSQ 7
           G+T+P+Q
Sbjct: 225 GITLPTQ 231
>NP_001258924
          Length = 460

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   GVTIPSQ 7
           G+T+P+Q
Sbjct: 226 GITLPTQ 232
>NP_852136
          Length = 354

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           VT+P  RH
Sbjct: 128 VTLPKGRH 135
>NP_073585
          Length = 1445

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1    GVTIPSQ 7
            GVT+P Q
Sbjct: 1089 GVTLPGQ 1095
>NP_061973
          Length = 467

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 319 GVTLRSQR 326
>NP_001029195
          Length = 467

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 319 GVTLRSQR 326
>NP_001029196
          Length = 467

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 319 GVTLRSQR 326
>NP_056649
          Length = 714

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T P+ RH
Sbjct: 503 GTTEPADRH 511
>NP_056648
          Length = 741

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T P+ RH
Sbjct: 503 GTTEPADRH 511
>NP_001093143
          Length = 100

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  IPSQRH 9
          IP QRH
Sbjct: 78 IPQQRH 83
>NP_001093142
          Length = 100

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  IPSQRH 9
          IP QRH
Sbjct: 78 IPQQRH 83
>NP_001093141
          Length = 100

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  IPSQRH 9
          IP QRH
Sbjct: 78 IPQQRH 83
>NP_001093140
          Length = 100

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4  IPSQRH 9
          IP QRH
Sbjct: 78 IPQQRH 83
>NP_001265721
          Length = 251

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  VTIPSQRH 9
          VT+P  RH
Sbjct: 25 VTLPKGRH 32
>NP_001265720
          Length = 253

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  VTIPSQRH 9
          VT+P  RH
Sbjct: 27 VTLPKGRH 34
>NP_001020461
          Length = 116

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 3 TIPSQRH 9
         T+P++RH
Sbjct: 3 TLPARRH 9
>NP_001026918
          Length = 652

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2   VTIPSQRH 9
           V +PS RH
Sbjct: 157 VELPSNRH 164
>XP_006724019
          Length = 741

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T P+ RH
Sbjct: 503 GTTEPADRH 511
>XP_006724018
          Length = 745

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T P+ RH
Sbjct: 534 GTTEPADRH 542
>XP_006724017
          Length = 769

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T P+ RH
Sbjct: 531 GTTEPADRH 539
>XP_006724016
          Length = 772

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVTIPSQRH 9
           G T P+ RH
Sbjct: 534 GTTEPADRH 542
>XP_006719421
          Length = 575

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  VTIPSQRH 9
          V +PS RH
Sbjct: 80 VELPSNRH 87
>XP_005268863
          Length = 575

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2  VTIPSQRH 9
          V +PS RH
Sbjct: 80 VELPSNRH 87
>XP_005273180
          Length = 155

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2  VTIPSQRH 9
          VT+ S+RH
Sbjct: 53 VTVSSRRH 60
>XP_006710835
          Length = 438

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 268 GVTLRSQR 275
>XP_006710834
          Length = 441

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 271 GVTLRSQR 278
>XP_005271096
          Length = 489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 319 GVTLRSQR 326
>XP_005271097
          Length = 489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 319 GVTLRSQR 326
>XP_005271094
          Length = 489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVTIPSQR 8
           GVT+ SQR
Sbjct: 319 GVTLRSQR 326
>NP_002999
          Length = 582

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   VTIPSQ 7
           VTIPSQ
Sbjct: 450 VTIPSQ 455
>NP_060626
          Length = 4363

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            GV+IP   H
Sbjct: 4308 GVSIPGPSH 4316
>NP_056193
          Length = 4388

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            GV+IP   H
Sbjct: 4333 GVSIPGPSH 4341
>NP_001193583
          Length = 2504

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP +RH
Sbjct: 1322 GRAIPPERH 1330
>NP_006303
          Length = 2514

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP +RH
Sbjct: 1332 GRAIPPERH 1340
>NP_004243
          Length = 358

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   IPSQRH 9
           IPSQ H
Sbjct: 245 IPSQEH 250
>NP_001070729
          Length = 2458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP +RH
Sbjct: 1322 GRAIPPERH 1330
>NP_055733
          Length = 802

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           +T+P +RH
Sbjct: 463 MTVPVRRH 470
>NP_061152
          Length = 1858

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP+Q H
Sbjct: 1361 GSVIPAQAH 1369
>NP_891847
          Length = 1858

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP+Q H
Sbjct: 1361 GSVIPAQAH 1369
>NP_005392
          Length = 1187

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 4   IPSQRH 9
           IPS RH
Sbjct: 426 IPSHRH 431
>NP_056485
          Length = 574

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1  GVTIPSQR 8
          G T+P++R
Sbjct: 55 GTTVPARR 62
>NP_003881
          Length = 5405

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    VTIPSQRH 9
            VT+PS  H
Sbjct: 1801 VTLPSSYH 1808

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    VTIPSQRH 9
            VT+PS  H
Sbjct: 3002 VTLPSSYH 3009

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 2    VTIPSQRH 9
            VT+PS  H
Sbjct: 4203 VTLPSSYH 4210
>NP_001123553
          Length = 1036

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           + IP++RH
Sbjct: 139 IPIPTRRH 146
>NP_056052
          Length = 1354

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GVTIPSQ 7
           G+TIPS+
Sbjct: 734 GLTIPSK 740
>NP_001095139
          Length = 924

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>NP_001245335
          Length = 481

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1   GVTIPS 6
           G+T+PS
Sbjct: 346 GITVPS 351
>NP_001036001
          Length = 532

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 13 VTLPGQR 19
>NP_001034486
          Length = 210

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           V+IP QR+
Sbjct: 183 VSIPGQRY 190
>NP_001265245
          Length = 490

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 13 VTLPGQR 19
>NP_001265244
          Length = 520

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 13 VTLPGQR 19
>NP_001265242
          Length = 532

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 13 VTLPGQR 19
>NP_067071
          Length = 828

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   IPSQRH 9
           +PS+RH
Sbjct: 726 LPSERH 731
>NP_003857
          Length = 924

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>NP_002653
          Length = 1074

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           + IP++RH
Sbjct: 139 IPIPTRRH 146
>NP_001269251
          Length = 300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           G+T PSQ
Sbjct: 153 GITSPSQ 159
>NP_001265243
          Length = 567

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 13 VTLPGQR 19
>NP_001027024
          Length = 579

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 60 VTLPGQR 66
>XP_006723921
          Length = 548

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   IPSQRH 9
           +PS+RH
Sbjct: 446 LPSERH 451
>XP_006723920
          Length = 651

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   IPSQRH 9
           +PS+RH
Sbjct: 549 LPSERH 554
>XP_006723919
          Length = 707

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 4   IPSQRH 9
           +PS+RH
Sbjct: 605 LPSERH 610
>XP_006720498
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           +T+P +RH
Sbjct: 191 MTVPVRRH 198
>XP_006718290
          Length = 532

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  VTIPSQR 8
          VT+P QR
Sbjct: 13 VTLPGQR 19
>XP_006716112
          Length = 1816

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP+Q H
Sbjct: 1319 GSVIPAQAH 1327
>XP_005250550
          Length = 1858

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVTIPSQRH 9
            G  IP+Q H
Sbjct: 1361 GSVIPAQAH 1369
>XP_006714467
          Length = 595

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>XP_006714465
          Length = 924

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>XP_005263379
          Length = 933

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>XP_006714464
          Length = 938

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>XP_006714463
          Length = 947

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT PS+
Sbjct: 95  GVTFPSE 101
>XP_005247591
          Length = 1036

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           + IP++RH
Sbjct: 139 IPIPTRRH 146
>XP_005247590
          Length = 1074

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           + IP++RH
Sbjct: 139 IPIPTRRH 146
>NP_002998
          Length = 462

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   VTIPSQ 7
           +TIPSQ
Sbjct: 330 ITIPSQ 335
>NP_997327
          Length = 179

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GVTIPSQ 7
           GVT P+Q
Sbjct: 170 GVTFPTQ 176
>NP_787052
          Length = 882

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 2   VTIPSQRH 9
           +T+P +RH
Sbjct: 553 LTVPVRRH 560
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.133    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 781,952
Number of extensions: 1542
Number of successful extensions: 125
Number of sequences better than 10000.0: 123
Number of HSP's gapped: 125
Number of HSP's successfully gapped: 125
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package