Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_951008 19 665 NP_003115 16 5631 NP_689931 16 5631 NP_001272320 16 5631 XP_006718526 16 5631 XP_005273893 16 5631 XP_006718525 16 5631 XP_006718524 16 5631 XP_006718523 16 5631 NP_001094861 16 5631 NP_001166176 16 7355 NP_001036024 16 7355 NP_001409 16 7355 NP_872393 16 7355 XP_006725408 16 7355 XP_006725407 16 7355 XP_006725406 16 7355 XP_006725405 16 7355 XP_006724404 16 7355 XP_006724403 16 7355 XP_005261845 16 7355 XP_005261844 16 7355 XP_005261843 16 7355 XP_005257698 16 7355 XP_005257699 16 7355 XP_006722134 16 7355 XP_005257697 16 7355 XP_006712515 16 7355 XP_006712513 16 7355 XP_006712512 16 7355 XP_006712511 16 7355 XP_006712510 16 7355 XP_006712509 16 7355 XP_005246533 16 7355 XP_006712508 16 7355 NP_115893 16 7355 NP_060228 16 7355 NP_009075 16 7355 NP_067069 16 7355 NP_899236 15 9605 NP_001714 15 9605 NP_056363 15 9605 NP_001138241 15 9605 NP_001138242 15 9605 NP_054742 15 9605 NP_115997 15 9605 NP_065779 15 9605 NP_060267 15 9605 XP_005259650 15 9605 XP_005273841 15 9605 XP_005273840 15 9605 XP_005273839 15 9605 XP_006718500 15 9605 XP_006715232 15 9605 XP_005249383 15 9605 XP_005249382 15 9605 XP_005249381 15 9605 XP_005249380 15 9605 XP_005249379 15 9605 XP_005249377 15 9605 XP_005249376 15 9605 XP_005249375 15 9605 XP_005249374 15 9605 XP_005249373 15 9605 XP_005249372 15 9605 XP_005249371 15 9605 XP_005249370 15 9605 XP_005249369 15 9605 XP_005249368 15 9605 XP_005249367 15 9605 NP_612480 15 9605>NP_951008 Length = 1086 Score = 19.2 bits (38), Expect = 665 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GVRQIRLPA 9 G++QIRLPA Sbjct: 1060 GLKQIRLPA 1068>NP_003115 Length = 261 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVRQIRLPA 9 G+R +R+PA Sbjct: 60 GLRVVRVPA 68>NP_689931 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR RLP+ Sbjct: 312 GVRTTRLPS 320>NP_001272320 Length = 277 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VRQIRLPA 9 VRQ+R+P+ Sbjct: 5 VRQLRVPS 12>XP_006718526 Length = 672 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR RLP+ Sbjct: 29 GVRTTRLPS 37>XP_005273893 Length = 825 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR RLP+ Sbjct: 182 GVRTTRLPS 190>XP_006718525 Length = 895 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR RLP+ Sbjct: 312 GVRTTRLPS 320>XP_006718524 Length = 912 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR RLP+ Sbjct: 269 GVRTTRLPS 277>XP_006718523 Length = 947 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR RLP+ Sbjct: 312 GVRTTRLPS 320>NP_001094861 Length = 592 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GVRQIRL 7 G+RQIRL Sbjct: 316 GLRQIRL 322>NP_001166176 Length = 907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 GVR++R P Sbjct: 567 GVREMRAP 574>NP_001036024 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 GVR++R P Sbjct: 529 GVREMRAP 536>NP_001409 Length = 907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 GVR++R P Sbjct: 567 GVREMRAP 574>NP_872393 Length = 3234 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3039 GLRQLRRP 3046>XP_006725408 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_006725407 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_006725406 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_006725405 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_006724404 Length = 1442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIRLPA 9 +Q+RLPA Sbjct: 1020 QQVRLPA 1026>XP_006724403 Length = 2449 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIRLPA 9 +Q+RLPA Sbjct: 901 QQVRLPA 907>XP_005261845 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIRLPA 9 +Q+RLPA Sbjct: 1020 QQVRLPA 1026>XP_005261844 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIRLPA 9 +Q+RLPA Sbjct: 1020 QQVRLPA 1026>XP_005261843 Length = 2568 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RQIRLPA 9 +Q+RLPA Sbjct: 1020 QQVRLPA 1026>XP_005257698 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_005257699 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_006722134 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_005257697 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>XP_006712515 Length = 3232 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3037 GLRQLRRP 3044>XP_006712513 Length = 3220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3025 GLRQLRRP 3032>XP_006712512 Length = 3237 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3042 GLRQLRRP 3049>XP_006712511 Length = 3256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3061 GLRQLRRP 3068>XP_006712510 Length = 3305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3110 GLRQLRRP 3117>XP_006712509 Length = 3319 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3124 GLRQLRRP 3131>XP_005246533 Length = 3323 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3128 GLRQLRRP 3135>XP_006712508 Length = 3324 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3129 GLRQLRRP 3136>NP_115893 Length = 3258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+RQ+R P Sbjct: 3063 GLRQLRRP 3070>NP_060228 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVRQIRL 7 G+RQ+RL Sbjct: 88 GIRQMRL 94>NP_009075 Length = 344 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 GVR +R PA Sbjct: 162 GVRFLRCPA 170>NP_067069 Length = 133 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVRQIRLP 8 G+ QI+LP Sbjct: 50 GLEQIKLP 57>NP_899236 Length = 5497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1087 IRQIRTP 1093>NP_001714 Length = 2649 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 761 IRQIRTP 767>NP_056363 Length = 5171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 761 IRQIRTP 767>NP_001138241 Length = 5675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1265 IRQIRTP 1271>NP_001138242 Length = 5537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1127 IRQIRTP 1133>NP_054742 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GVRQIRLP 8 GVR RLP Sbjct: 439 GVRLARLP 446>NP_115997 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QIRLPA 9 Q+RLPA Sbjct: 1020 QVRLPA 1025>NP_065779 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVRQIRLPA 9 GVR+ R+P+ Sbjct: 10 GVRRSRVPS 18>NP_060267 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GVRQIRL 7 G+R++RL Sbjct: 276 GIREVRL 282>XP_005259650 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GVRQIRL 7 G+R++RL Sbjct: 128 GIREVRL 134>XP_005273841 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 G+R + LPA Sbjct: 195 GLRPLELPA 203>XP_005273840 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 G+R + LPA Sbjct: 195 GLRPLELPA 203>XP_005273839 Length = 337 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 G+R + LPA Sbjct: 195 GLRPLELPA 203>XP_006718500 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 G+R + LPA Sbjct: 195 GLRPLELPA 203>XP_006715232 Length = 7498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1087 IRQIRTP 1093>XP_005249383 Length = 3186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>XP_005249382 Length = 5732 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>XP_005249381 Length = 7281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 761 IRQIRTP 767>XP_005249380 Length = 7607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1087 IRQIRTP 1093>XP_005249379 Length = 7633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1113 IRQIRTP 1119>XP_005249377 Length = 7640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1120 IRQIRTP 1126>XP_005249376 Length = 7647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1127 IRQIRTP 1133>XP_005249375 Length = 7680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1160 IRQIRTP 1166>XP_005249374 Length = 7709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>XP_005249373 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1203 IRQIRTP 1209>XP_005249372 Length = 7785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1265 IRQIRTP 1271>XP_005249371 Length = 7788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>XP_005249370 Length = 7794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>XP_005249369 Length = 7797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1277 IRQIRTP 1283>XP_005249368 Length = 7812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>XP_005249367 Length = 7818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VRQIRLP 8 +RQIR P Sbjct: 1298 IRQIRTP 1304>NP_612480 Length = 381 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVRQIRLPA 9 G+R + LPA Sbjct: 195 GLRPLELPA 203Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.149 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 524,385 Number of extensions: 965 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |