Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004251 20 509 NP_115543 17 2528 XP_006721041 17 2528 XP_006721040 17 2528 XP_005255739 17 2528 NP_660159 16 5631 XP_006715412 16 5631 NP_001077430 16 7355 NP_000426 16 7355 NP_775907 16 7355 NP_001001344 16 7355 NP_068768 16 7355 NP_009187 16 7355 NP_619636 16 7355 NP_714921 16 7355 XP_005274750 16 7355 XP_005274749 16 7355 XP_005274748 16 7355 XP_005274747 16 7355 XP_006724886 16 7355 XP_005274746 16 7355 XP_005258866 16 7355 XP_005259981 16 7355 XP_006718490 16 7355 NP_001138683 16 7355 NP_115758 15 9605 NP_055945 15 9605 NP_001137282 15 9605 NP_001268451 15 9605 NP_001268449 15 9605 NP_877954 15 9605 NP_001268450 15 9605 NP_115874 15 9605 NP_001269285 15 9605 NP_872114 15 9605 NP_599028 15 9605 NP_439897 15 9605 NP_006366 15 9605 NP_001268665 15 9605 NP_001105 15 9605 NP_001269286 15 9605 XP_005262412 15 9605 XP_005262411 15 9605 XP_005260916 15 9605 XP_005255842 15 9605 XP_006721191 15 9605 XP_005255841 15 9605 XP_005255840 15 9605 XP_005255839 15 9605 XP_005255837 15 9605 XP_005255838 15 9605 XP_005255836 15 9605 XP_003961007 15 9605>NP_004251 Length = 1208 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GVLVEFNEL 9 GVLVEF+EL Sbjct: 1025 GVLVEFSEL 1033>NP_115543 Length = 813 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G L+EFNE Sbjct: 600 GELIEFNE 607>XP_006721041 Length = 680 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G L+EFNE Sbjct: 467 GELIEFNE 474>XP_006721040 Length = 661 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G L+EFNE Sbjct: 448 GELIEFNE 455>XP_005255739 Length = 823 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G L+EFNE Sbjct: 610 GELIEFNE 617>NP_660159 Length = 617 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVLVEFNEL 9 G+LV NEL Sbjct: 165 GLLVSLNEL 173>XP_006715412 Length = 538 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVLVEFNEL 9 G+LV NEL Sbjct: 165 GLLVSLNEL 173>NP_001077430 Length = 1523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G+L +FNE Sbjct: 276 GLLCQFNE 283>NP_000426 Length = 2321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GVLVEFNE 8 GVL E NE Sbjct: 1154 GVLCEINE 1161>NP_775907 Length = 1518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G+L +FNE Sbjct: 276 GLLCQFNE 283>NP_001001344 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>NP_068768 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>NP_009187 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVLVEFNEL 9 G+L FNE+ Sbjct: 88 GLLASFNEV 96>NP_619636 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVLVEFNEL 9 GVL +FN L Sbjct: 241 GVLYDFNGL 249>NP_714921 Length = 680 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VLVEFNEL 9 +++EFNEL Sbjct: 106 LVMEFNEL 113>XP_005274750 Length = 1159 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>XP_005274749 Length = 1173 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>XP_005274748 Length = 1206 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>XP_005274747 Length = 1220 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>XP_006724886 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>XP_005274746 Length = 1249 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 GVL++ N+L Sbjct: 229 GVLIQANDL 237>XP_005258866 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVLVEFNE 8 G+L +FNE Sbjct: 276 GLLCQFNE 283>XP_005259981 Length = 2269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GVLVEFNE 8 GVL E NE Sbjct: 1102 GVLCEINE 1109>XP_006718490 Length = 635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVLVEFNEL 9 G+L FNE+ Sbjct: 88 GLLASFNEV 96>NP_001138683 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVLVEFNEL 9 G+L FNE+ Sbjct: 66 GLLASFNEV 74>NP_115758 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV FN+L Sbjct: 442 ILVAFNDL 449>NP_055945 Length = 1266 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G++ E+N++ Sbjct: 121 GIIAEYNKI 129>NP_001137282 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 V VEFN+L Sbjct: 60 VSVEFNKL 67>NP_001268451 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV+F EL Sbjct: 121 ILVDFKEL 128>NP_001268449 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV+F EL Sbjct: 121 ILVDFKEL 128>NP_877954 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV+F EL Sbjct: 121 ILVDFKEL 128>NP_001268450 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV+F EL Sbjct: 121 ILVDFKEL 128>NP_115874 Length = 840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV+F EL Sbjct: 121 ILVDFKEL 128>NP_001269285 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F +L Sbjct: 419 GMLIQFRDL 427>NP_872114 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F ++ Sbjct: 327 GILIQFEQI 335>NP_599028 Length = 663 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F +L Sbjct: 419 GMLIQFRDL 427>NP_439897 Length = 656 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F +L Sbjct: 419 GMLIQFRDL 427>NP_006366 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F ++ Sbjct: 298 GILIQFEQI 306>NP_001268665 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F ++ Sbjct: 298 GILIQFEQI 306>NP_001105 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>NP_001269286 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F +L Sbjct: 118 GMLIQFRDL 126>XP_005262412 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F ++ Sbjct: 327 GILIQFEQI 335>XP_005262411 Length = 610 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+L++F ++ Sbjct: 327 GILIQFEQI 335>XP_005260916 Length = 581 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VLVEFNEL 9 +LV+F EL Sbjct: 121 ILVDFKEL 128>XP_005255842 Length = 880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 762 GVMVEFS 768>XP_006721191 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 790 GVMVEFS 796>XP_005255841 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>XP_005255840 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>XP_005255839 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>XP_005255837 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>XP_005255838 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>XP_005255836 Length = 1080 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GVLVEFN 7 GV+VEF+ Sbjct: 962 GVMVEFS 968>XP_003961007 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVLVEFNEL 9 G+++E+N + Sbjct: 409 GIIIEWNRM 417Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.150 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 500,502 Number of extensions: 807 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |