Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 21 229 NP_671714 21 229 XP_006715890 21 229 XP_005250160 21 229 XP_005250159 21 229 NP_031382 17 2528 XP_005250289 17 2528 NP_055429 17 3301 NP_004597 17 4312 NP_001273003 17 4312 NP_620278 17 4312 XP_005262357 17 4312 XP_006724744 17 4312 XP_005262354 17 4312 XP_006724743 17 4312 XP_005262353 17 4312 XP_005262352 17 4312 NP_722516 17 4312 NP_064630 16 5631 XP_005267114 16 5631 NP_001231892 16 7355 NP_005800 16 7355 NP_001104488 16 7355 NP_001104489 16 7355 NP_660093 16 7355 NP_892009 16 7355 XP_006718432 16 7355 XP_005253271 16 7355 XP_006718431 16 7355 XP_006718430 16 7355 XP_006718429 16 7355 XP_006718428 16 7355 XP_006718427 16 7355 NP_002565 15 9605 NP_001189360 15 9605 NP_859048 15 9605 NP_859047 15 9605 NP_003646 15 9605 NP_000833 15 9605 NP_009017 15 9605 NP_001137303 15 9605 XP_006720075 15 9605 XP_006718893 15 9605 XP_006718892 15 9605 XP_006718891 15 9605 XP_005263256 15 9605 NP_001103447 15 9605>NP_005742 Length = 3907 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GVITQLTAN 9 G+ITQLTAN Sbjct: 205 GIITQLTAN 213>NP_671714 Length = 3899 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GVITQLTAN 9 G+ITQLTAN Sbjct: 205 GIITQLTAN 213>XP_006715890 Length = 3860 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GVITQLTAN 9 G+ITQLTAN Sbjct: 205 GIITQLTAN 213>XP_005250160 Length = 3939 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GVITQLTAN 9 G+ITQLTAN Sbjct: 205 GIITQLTAN 213>XP_005250159 Length = 3952 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GVITQLTAN 9 G+ITQLTAN Sbjct: 205 GIITQLTAN 213>NP_031382 Length = 1761 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 ITQLTAN 9 ITQLTAN Sbjct: 1590 ITQLTAN 1596>XP_005250289 Length = 1761 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 ITQLTAN 9 ITQLTAN Sbjct: 1590 ITQLTAN 1596>NP_055429 Length = 1843 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 VITQLT N Sbjct: 653 VITQLTMN 660>NP_004597 Length = 1893 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>NP_001273003 Length = 1895 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>NP_620278 Length = 1872 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>XP_005262357 Length = 999 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>XP_006724744 Length = 1851 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>XP_005262354 Length = 1906 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>XP_006724743 Length = 1924 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>XP_005262353 Length = 1926 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>XP_005262352 Length = 1927 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 77 LITELTAN 84>NP_722516 Length = 1826 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VITQLTAN 9 +IT+LTAN Sbjct: 76 LITELTAN 83>NP_064630 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVITQLTA 8 GV+TQL A Sbjct: 1021 GVVTQLPA 1028>XP_005267114 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVITQLTA 8 GV+TQL A Sbjct: 1021 GVVTQLPA 1028>NP_001231892 Length = 2488 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1712 TQLTAN 1717>NP_005800 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 GV+ Q+T N Sbjct: 136 GVLRQITVN 144>NP_001104488 Length = 2365 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1592 TQLTAN 1597>NP_001104489 Length = 1493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 720 TQLTAN 725>NP_660093 Length = 2429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1656 TQLTAN 1661>NP_892009 Length = 2432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1656 TQLTAN 1661>XP_006718432 Length = 1464 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 688 TQLTAN 693>XP_005253271 Length = 1481 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 705 TQLTAN 710>XP_006718431 Length = 1493 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 720 TQLTAN 725>XP_006718430 Length = 1551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 775 TQLTAN 780>XP_006718429 Length = 2416 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1640 TQLTAN 1645>XP_006718428 Length = 2455 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1679 TQLTAN 1684>XP_006718427 Length = 2465 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TQLTAN 9 TQLTAN Sbjct: 1689 TQLTAN 1694>NP_002565 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 G++ Q+T N Sbjct: 137 GILRQITVN 145>NP_001189360 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 G++ Q+T N Sbjct: 137 GILRQITVN 145>NP_859048 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 G++ Q+T N Sbjct: 137 GILRQITVN 145>NP_859047 Length = 199 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 G++ Q+T N Sbjct: 137 GILRQITVN 145>NP_003646 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 +IT +TAN Sbjct: 541 IITDVTAN 548>NP_000833 Length = 1180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 V+T+ TAN Sbjct: 1032 VVTRFTAN 1039>NP_009017 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 G++T+ T N Sbjct: 88 GILTRFTTN 96>NP_001137303 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 V+T+ TAN Sbjct: 1064 VVTRFTAN 1071>XP_006720075 Length = 1127 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GVITQLTAN 9 G++T+ T N Sbjct: 88 GILTRFTTN 96>XP_006718893 Length = 1180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 V+T+ TAN Sbjct: 1032 VVTRFTAN 1039>XP_006718892 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 V+T+ TAN Sbjct: 1064 VVTRFTAN 1071>XP_006718891 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VITQLTAN 9 V+T+ TAN Sbjct: 1064 VVTRFTAN 1071>XP_005263256 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVITQLTA 8 G+ITQL + Sbjct: 877 GIITQLAS 884>NP_001103447 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVITQLTA 8 G+ITQL + Sbjct: 877 GIITQLAS 884Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.127 0.326 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 299,264 Number of extensions: 364 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |