Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001155973 18 1135 NP_055903 18 1135 NP_067018 18 1482 NP_001298 17 2528 NP_001171952 17 2528 NP_001171951 17 2528 NP_065854 17 3301 NP_008915 17 3301 NP_064517 17 3301 NP_001153572 17 3301 XP_006724095 17 3301 XP_006724093 17 3301 XP_006724092 17 3301 XP_005261217 17 3301 XP_005261216 17 3301 XP_005263210 17 3301 NP_955360 17 3301 NP_878268 17 3301 NP_001032642 17 3301 NP_001191676 17 4312 NP_002904 17 4312 NP_004432 17 4312 NP_057710 16 5631 XP_005260503 16 5631 XP_005260502 16 5631 NP_003042 16 7355 NP_001159968 16 7355 NP_001092007 16 7355 NP_689499 16 7355 NP_005089 16 7355 NP_001138471 16 7355 NP_115622 16 7355 NP_002201 16 7355 NP_001138472 16 7355 XP_005266139 16 7355 XP_005266136 16 7355 XP_006717167 16 7355 XP_006717166 16 7355 XP_006717165 16 7355 XP_006712576 16 7355 XP_005246593 16 7355 NP_001167621 15 9605 NP_878899 15 9605 NP_071896 15 9605 NP_060829 15 9605 NP_001167589 15 9605 NP_976049 15 9605 XP_005270105 15 9605 XP_006713597 15 9605 XP_006713596 15 9605 XP_006713595 15 9605 XP_006713594 15 9605>NP_001155973 Length = 1833 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 GV FVVSGR Sbjct: 354 GVNFVVSGR 362>NP_055903 Length = 1723 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 GV FVVSGR Sbjct: 354 GVNFVVSGR 362>NP_067018 Length = 220 Score = 18.1 bits (35), Expect = 1482 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G++FV+SG Sbjct: 122 GIVFVISG 129>NP_001298 Length = 211 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G+IF+V+G Sbjct: 123 GIIFIVAG 130>NP_001171952 Length = 145 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G+IF+V+G Sbjct: 123 GIIFIVAG 130>NP_001171951 Length = 211 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G+IF+V+G Sbjct: 123 GIIFIVAG 130>NP_065854 Length = 620 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVIFVVSGR 9 GV+F V GR Sbjct: 318 GVLFCVGGR 326>NP_008915 Length = 228 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G++F++SG Sbjct: 121 GIVFILSG 128>NP_064517 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 18 GFVFVVSG 25>NP_001153572 Length = 207 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G++F++SG Sbjct: 100 GIVFILSG 107>XP_006724095 Length = 265 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_006724093 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_006724092 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_005261217 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 18 GFVFVVSG 25>XP_005261216 Length = 463 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 105 GFVFVVSG 112>XP_005263210 Length = 437 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GVIFVVSGR 9 GV+F V GR Sbjct: 135 GVLFCVGGR 143>NP_955360 Length = 225 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G+IF+++G Sbjct: 123 GIIFIITG 130>NP_878268 Length = 226 Score = 16.9 bits (32), Expect = 3301 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G++F++SG Sbjct: 119 GIVFILSG 126>NP_001032642 Length = 376 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G +FVVSG Sbjct: 18 GFVFVVSG 25>NP_001191676 Length = 1148 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G+IFV++G Sbjct: 409 GLIFVITG 416>NP_002904 Length = 1147 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GVIFVVSG 8 G+IFV++G Sbjct: 409 GLIFVITG 416>NP_004432 Length = 984 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GVIFVVS 7 GV+FVVS Sbjct: 549 GVVFVVS 555>NP_057710 Length = 659 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 IFVVSGR 9 IFVV+GR Sbjct: 276 IFVVTGR 282>XP_005260503 Length = 153 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G+IFV+ G Sbjct: 80 GIIFVLEG 87>XP_005260502 Length = 271 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G+IFV+ G Sbjct: 80 GIIFVLEG 87>NP_003042 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 GV+ ++SG Sbjct: 427 GVVLIISG 434>NP_001159968 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 GV+ ++SG Sbjct: 427 GVVLIISG 434>NP_001092007 Length = 1342 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 521 ILFVVSG 527>NP_689499 Length = 1317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 496 ILFVVSG 502>NP_005089 Length = 206 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 FVVSGR 9 FVVSGR Sbjct: 182 FVVSGR 187>NP_001138471 Length = 1002 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 G++++ +GR Sbjct: 355 GIVYIFNGR 363>NP_115622 Length = 569 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 IFVVSGR 9 +FVV+GR Sbjct: 110 VFVVTGR 116>NP_002201 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 G++++ +GR Sbjct: 401 GIVYIFNGR 409>NP_001138472 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 G++++ +GR Sbjct: 365 GIVYIFNGR 373>XP_005266139 Length = 741 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 522 ILFVVSG 528>XP_005266136 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 522 ILFVVSG 528>XP_006717167 Length = 1309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 488 ILFVVSG 494>XP_006717166 Length = 1316 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 495 ILFVVSG 501>XP_006717165 Length = 1343 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VIFVVSG 8 ++FVVSG Sbjct: 522 ILFVVSG 528>XP_006712576 Length = 901 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 G++++ +GR Sbjct: 254 GIVYIFNGR 262>XP_005246593 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 GVIFVVSGR 9 G++++ +GR Sbjct: 400 GIVYIFNGR 408>NP_001167621 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GVIFVV 6 GVIFVV Sbjct: 91 GVIFVV 96>NP_878899 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GVIFVV 6 GVIFVV Sbjct: 91 GVIFVV 96>NP_071896 Length = 800 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 GVI V+SG Sbjct: 400 GVIKVISG 407>NP_060829 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 G+I+VV G Sbjct: 276 GMIYVVQG 283>NP_001167589 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IFVVSGR 9 +F+V+GR Sbjct: 223 VFIVTGR 229>NP_976049 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 IFVVSGR 9 +F+V+GR Sbjct: 223 VFIVTGR 229>XP_005270105 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GVIFVVSG 8 GVI V+SG Sbjct: 400 GVIKVISG 407>XP_006713597 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GVIFVV 6 GVIFVV Sbjct: 66 GVIFVV 71>XP_006713596 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GVIFVV 6 GVIFVV Sbjct: 66 GVIFVV 71>XP_006713595 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GVIFVV 6 GVIFVV Sbjct: 76 GVIFVV 81>XP_006713594 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GVIFVV 6 GVIFVV Sbjct: 76 GVIFVV 81Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.157 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 454,065 Number of extensions: 992 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |