Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004324                                                              22     103
NP_002871                                                              22     103
XP_005250103                                                           22     103
XP_005250102                                                           22     103
XP_005265416                                                           22     103
XP_005265415                                                           22     103
XP_005265414                                                           22     103
XP_005265412                                                           22     103
NP_001243125                                                           21     229
NP_001645                                                              21     229
XP_006724592                                                           21     229
NP_443076                                                              18    1935
NP_005152                                                              17    3301
NP_212133                                                              17    4312
NP_004877                                                              17    4312
NP_940938                                                              17    4312
NP_001138888                                                           17    4312
XP_006723014                                                           17    4312
XP_006723013                                                           17    4312
XP_005259958                                                           17    4312
XP_005259957                                                           17    4312
XP_005259959                                                           17    4312
XP_005259956                                                           17    4312
XP_005259955                                                           17    4312
NP_065805                                                              16    5631
NP_000946                                                              16    5631
XP_005247728                                                           16    5631
XP_006713777                                                           16    5631
NP_001070665                                                           16    7355
NP_001070664                                                           16    7355
NP_058649                                                              16    7355
NP_001070826                                                           16    7355
NP_663623                                                              16    7355
NP_056530                                                              16    7355
NP_056127                                                              16    7355
NP_075068                                                              16    7355
NP_065928                                                              16    7355
NP_932348                                                              16    7355
NP_997069                                                              16    7355
NP_001003745                                                           16    7355
XP_005256402                                                           16    7355
XP_006722342                                                           16    7355
XP_005256527                                                           16    7355
XP_006714407                                                           16    7355
XP_006714406                                                           16    7355
XP_005263348                                                           16    7355
XP_005263347                                                           16    7355
XP_005263346                                                           16    7355
XP_005263345                                                           16    7355
XP_005263344                                                           16    7355
XP_005263343                                                           16    7355
XP_005263342                                                           16    7355
XP_005263341                                                           16    7355
XP_005263340                                                           16    7355
XP_005263339                                                           16    7355
NP_835462                                                              16    7355
NP_001004460                                                           16    7355
NP_002606                                                              15    9605
NP_001360                                                              15    9605
NP_060649                                                              15    9605
NP_001273443                                                           15    9605
NP_851997                                                              15    9605
NP_001092740                                                           15    9605
NP_000933                                                              15    9605
NP_001269845                                                           15    9605
NP_001376                                                              15    9605
NP_001269848                                                           15    9605
NP_001252519                                                           15    9605
NP_958831                                                              15    9605
NP_001073863                                                           15    9605
NP_001252518                                                           15    9605
XP_006719172                                                           15    9605
XP_006719171                                                           15    9605
XP_005253481                                                           15    9605
XP_005252046                                                           15    9605
XP_006716581                                                           15    9605
XP_006716580                                                           15    9605
XP_005250875                                                           15    9605
XP_006716508                                                           15    9605
XP_005251256                                                           15    9605
XP_006716507                                                           15    9605
XP_005251255                                                           15    9605
XP_005251254                                                           15    9605
XP_005251253                                                           15    9605
XP_005251252                                                           15    9605
XP_005251250                                                           15    9605
XP_005251248                                                           15    9605
XP_006716506                                                           15    9605
XP_005251246                                                           15    9605
XP_005248319                                                           15    9605
>NP_004324
          Length = 766

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 596 GLATVKSRW 604
>NP_002871
          Length = 648

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 488 GLATVKSRW 496
>XP_005250103
          Length = 758

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 596 GLATVKSRW 604
>XP_005250102
          Length = 767

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 596 GLATVKSRW 604
>XP_005265416
          Length = 534

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 374 GLATVKSRW 382
>XP_005265415
          Length = 567

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 407 GLATVKSRW 415
>XP_005265414
          Length = 615

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 455 GLATVKSRW 463
>XP_005265412
          Length = 648

 Score = 21.9 bits (45), Expect =   103
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVKSRW
Sbjct: 488 GLATVKSRW 496
>NP_001243125
          Length = 609

 Score = 20.8 bits (42), Expect =   229
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVK+RW
Sbjct: 452 GLATVKTRW 460
>NP_001645
          Length = 606

 Score = 20.8 bits (42), Expect =   229
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVK+RW
Sbjct: 449 GLATVKTRW 457
>XP_006724592
          Length = 611

 Score = 20.8 bits (42), Expect =   229
 Identities = 7/9 (77%), Positives = 9/9 (100%)

Query: 1   GVATVKSRW 9
           G+ATVK+RW
Sbjct: 454 GLATVKTRW 462
>NP_443076
          Length = 536

 Score = 17.7 bits (34), Expect =  1935
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GVATVKSRW 9
          GVA+V S+W
Sbjct: 44 GVASVPSQW 52
>NP_005152
          Length = 380

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   VATVKSRW 9
           VATV S W
Sbjct: 188 VATVSSEW 195
>NP_212133
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>NP_004877
          Length = 575

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GVATVKSRW 9
           GVA V+S W
Sbjct: 406 GVALVESGW 414
>NP_940938
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>NP_001138888
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>XP_006723014
          Length = 408

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GVATVKSRW 9
           GVA V+S W
Sbjct: 164 GVALVESGW 172
>XP_006723013
          Length = 650

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GVATVKSRW 9
           GVA V+S W
Sbjct: 406 GVALVESGW 414
>XP_005259958
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>XP_005259957
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>XP_005259959
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>XP_005259956
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>XP_005259955
          Length = 189

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           +ATV +RW
Sbjct: 98  LATVNARW 105
>NP_065805
          Length = 1444

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TVKSRW 9
           TVKS+W
Sbjct: 960 TVKSQW 965
>NP_000946
          Length = 402

 Score = 16.2 bits (30), Expect =  5631
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   GVATVKSRW 9
           G+A +++RW
Sbjct: 226 GLALLRARW 234
>XP_005247728
          Length = 1413

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TVKSRW 9
           TVKS+W
Sbjct: 929 TVKSQW 934
>XP_006713777
          Length = 1424

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 4   TVKSRW 9
           TVKS+W
Sbjct: 940 TVKSQW 945
>NP_001070665
          Length = 683

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VAT +S+W
Sbjct: 648 VATNRSKW 655
>NP_001070664
          Length = 489

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VAT +S+W
Sbjct: 454 VATNRSKW 461
>NP_058649
          Length = 933

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VAT +S+W
Sbjct: 898 VATNRSKW 905
>NP_001070826
          Length = 575

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VAT +S+W
Sbjct: 540 VATNRSKW 547
>NP_663623
          Length = 577

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GVATVKS 7
           GVATVK+
Sbjct: 167 GVATVKA 173
>NP_056530
          Length = 509

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1  GVATVKSRW 9
          G+A + +RW
Sbjct: 54 GLALIHARW 62
>NP_056127
          Length = 5005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>NP_075068
          Length = 1146

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVA +  RW
Sbjct: 853 GVARLAKRW 861
>NP_065928
          Length = 4427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GVATVKSRW 9
            G+A  K+RW
Sbjct: 3285 GLAGEKARW 3293
>NP_932348
          Length = 915

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ATVKSRW 9
           +TVKS W
Sbjct: 357 STVKSAW 363
>NP_997069
          Length = 315

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VATV++ W
Sbjct: 156 VATVQTTW 163
>NP_001003745
          Length = 314

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VATV++ W
Sbjct: 155 VATVQTTW 162
>XP_005256402
          Length = 751

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ATVKSRW 9
           +TVKS W
Sbjct: 357 STVKSAW 363
>XP_006722342
          Length = 762

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   ATVKSRW 9
           +TVKS W
Sbjct: 368 STVKSAW 374
>XP_005256527
          Length = 4427

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GVATVKSRW 9
            G+A  K+RW
Sbjct: 3285 GLAGEKARW 3293
>XP_006714407
          Length = 5004

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_006714406
          Length = 3680

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263348
          Length = 4443

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  GVATVKSRW 9
          G  TVK +W
Sbjct: 46 GQKTVKPKW 54
>XP_005263347
          Length = 4640

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263346
          Length = 4983

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263345
          Length = 4991

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263344
          Length = 5005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263343
          Length = 5009

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263342
          Length = 5025

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263341
          Length = 5026

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263340
          Length = 5026

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>XP_005263339
          Length = 5026

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           G  TVK +W
Sbjct: 629 GQKTVKPKW 637
>NP_835462
          Length = 317

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VATV++ W
Sbjct: 156 VATVQTTW 163
>NP_001004460
          Length = 303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   VATVKSRW 9
           VATV++ W
Sbjct: 142 VATVQTTW 149
>NP_002606
          Length = 418

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVA  K +W
Sbjct: 209 GVAHFKGQW 217
>NP_001360
          Length = 4624

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVATVKSRW 9
            G+A  K RW
Sbjct: 3495 GLAGEKERW 3503
>NP_060649
          Length = 1270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    ATVKSRW 9
            ATV S+W
Sbjct: 1207 ATVPSQW 1213
>NP_001273443
          Length = 1269

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    ATVKSRW 9
            ATV S+W
Sbjct: 1206 ATVPSQW 1212
>NP_851997
          Length = 1278

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    ATVKSRW 9
            ATV S+W
Sbjct: 1215 ATVPSQW 1221
>NP_001092740
          Length = 500

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVATVKSR 8
           GVA V+SR
Sbjct: 453 GVAEVRSR 460
>NP_000933
          Length = 216

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 6/8 (75%)

Query: 2   VATVKSRW 9
           + TVK+ W
Sbjct: 154 ITTVKTAW 161
>NP_001269845
          Length = 845

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 366 GVATTGTAW 374
>NP_001376
          Length = 519

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   VATVKSR 8
           VAT+KSR
Sbjct: 497 VATLKSR 503
>NP_001269848
          Length = 876

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 376 GVATTGTAW 384
>NP_001252519
          Length = 920

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GVATVK 6
           GVATVK
Sbjct: 352 GVATVK 357
>NP_958831
          Length = 1013

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GVATVK 6
           GVATVK
Sbjct: 445 GVATVK 450
>NP_001073863
          Length = 915

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 436 GVATTGTAW 444
>NP_001252518
          Length = 1032

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GVATVK 6
           GVATVK
Sbjct: 464 GVATVK 469
>XP_006719172
          Length = 1270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    ATVKSRW 9
            ATV S+W
Sbjct: 1207 ATVPSQW 1213
>XP_006719171
          Length = 1270

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    ATVKSRW 9
            ATV S+W
Sbjct: 1207 ATVPSQW 1213
>XP_005253481
          Length = 1277

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    ATVKSRW 9
            ATV S+W
Sbjct: 1214 ATVPSQW 1220
>XP_005252046
          Length = 514

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GVATVKSR 8
           GVA V+SR
Sbjct: 467 GVAEVRSR 474
>XP_006716581
          Length = 502

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   VATVKSR 8
           VAT+KSR
Sbjct: 480 VATLKSR 486
>XP_006716580
          Length = 555

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   VATVKSR 8
           VAT+KSR
Sbjct: 533 VATLKSR 539
>XP_005250875
          Length = 555

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   VATVKSR 8
           VAT+KSR
Sbjct: 533 VATLKSR 539
>XP_006716508
          Length = 553

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  GVATVKSRW 9
          GVAT  + W
Sbjct: 74 GVATTGTAW 82
>XP_005251256
          Length = 604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 125 GVATTGTAW 133
>XP_006716507
          Length = 665

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 186 GVATTGTAW 194
>XP_005251255
          Length = 665

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 186 GVATTGTAW 194
>XP_005251254
          Length = 741

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 262 GVATTGTAW 270
>XP_005251253
          Length = 742

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 263 GVATTGTAW 271
>XP_005251252
          Length = 751

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 272 GVATTGTAW 280
>XP_005251250
          Length = 815

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 436 GVATTGTAW 444
>XP_005251248
          Length = 848

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 436 GVATTGTAW 444
>XP_006716506
          Length = 855

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 376 GVATTGTAW 384
>XP_005251246
          Length = 883

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1   GVATVKSRW 9
           GVAT  + W
Sbjct: 436 GVATTGTAW 444
>XP_005248319
          Length = 4609

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1    GVATVKSRW 9
            G+A  K RW
Sbjct: 3480 GLAGEKERW 3488
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.318    0.124    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 390,595
Number of extensions: 663
Number of successful extensions: 90
Number of sequences better than 10000.0: 90
Number of HSP's gapped: 90
Number of HSP's successfully gapped: 90
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.8 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package