Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_006715                                                              20     299
NP_005913                                                              20     299
XP_005267046                                                           20     299
XP_005267045                                                           20     299
NP_060988                                                              17    2528
NP_877428                                                              17    2528
NP_061874                                                              17    3301
NP_001269786                                                           17    3301
NP_060688                                                              17    3301
XP_005247601                                                           17    3301
XP_006713735                                                           17    3301
XP_006713734                                                           17    3301
XP_005246148                                                           17    3301
XP_005246145                                                           17    3301
XP_006712675                                                           17    3301
NP_060959                                                              17    4312
XP_005245394                                                           17    4312
XP_005245393                                                           17    4312
XP_006711515                                                           17    4312
XP_006711514                                                           17    4312
XP_006711513                                                           17    4312
NP_115783                                                              17    4312
NP_061752                                                              17    4312
NP_037514                                                              16    5631
NP_000005                                                              16    5631
XP_006719119                                                           16    5631
NP_001267474                                                           16    7355
NP_060732                                                              16    7355
NP_443715                                                              16    7355
NP_443716                                                              16    7355
NP_001267470                                                           16    7355
NP_443711                                                              16    7355
NP_001267475                                                           16    7355
NP_714915                                                              16    7355
NP_001135773                                                           16    7355
NP_005338                                                              16    7355
NP_001181966                                                           16    7355
NP_001071174                                                           16    7355
NP_079204                                                              16    7355
NP_061738                                                              16    7355
NP_114398                                                              16    7355
XP_006718040                                                           16    7355
XP_006718039                                                           16    7355
XP_006716750                                                           16    7355
XP_006716749                                                           16    7355
XP_006716748                                                           16    7355
XP_006715535                                                           16    7355
XP_006713758                                                           16    7355
XP_006713757                                                           16    7355
XP_006713756                                                           16    7355
XP_005247668                                                           16    7355
XP_006713755                                                           16    7355
XP_005247667                                                           16    7355
XP_005247666                                                           16    7355
XP_005247665                                                           16    7355
XP_005247664                                                           16    7355
XP_006713754                                                           16    7355
XP_006713753                                                           16    7355
XP_005247661                                                           16    7355
XP_006713752                                                           16    7355
XP_005247660                                                           16    7355
NP_001138409                                                           15    9605
NP_001269845                                                           15    9605
NP_001243040                                                           15    9605
NP_001243035                                                           15    9605
NP_004249                                                              15    9605
NP_001243038                                                           15    9605
NP_001265855                                                           15    9605
NP_001265856                                                           15    9605
NP_006036                                                              15    9605
NP_001269848                                                           15    9605
NP_001265858                                                           15    9605
NP_057405                                                              15    9605
NP_065138                                                              15    9605
NP_001073863                                                           15    9605
NP_056157                                                              15    9605
XP_006722047                                                           15    9605
XP_006722046                                                           15    9605
XP_006722045                                                           15    9605
XP_006722044                                                           15    9605
XP_005251258                                                           15    9605
XP_006716508                                                           15    9605
XP_005251256                                                           15    9605
XP_006716507                                                           15    9605
XP_005251255                                                           15    9605
XP_005251254                                                           15    9605
XP_005251253                                                           15    9605
XP_005251252                                                           15    9605
XP_005251250                                                           15    9605
XP_006716506                                                           15    9605
XP_005251246                                                           15    9605
XP_005248532                                                           15    9605
XP_005248531                                                           15    9605
XP_006714646                                                           15    9605
XP_006714645                                                           15    9605
>NP_006715
          Length = 1558

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GTVVGIKNL 9
           GTV+GIKNL
Sbjct: 411 GTVLGIKNL 419
>NP_005913
          Length = 1608

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GTVVGIKNL 9
           GTV+GIKNL
Sbjct: 411 GTVLGIKNL 419
>XP_005267046
          Length = 1554

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GTVVGIKNL 9
           GTV+GIKNL
Sbjct: 411 GTVLGIKNL 419
>XP_005267045
          Length = 1604

 Score = 20.4 bits (41), Expect =   299
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GTVVGIKNL 9
           GTV+GIKNL
Sbjct: 411 GTVLGIKNL 419
>NP_060988
          Length = 874

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVGI N
Sbjct: 347 GTVVGILN 354
>NP_877428
          Length = 875

 Score = 17.3 bits (33), Expect =  2528
 Identities = 7/8 (87%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVGI N
Sbjct: 348 GTVVGILN 355
>NP_061874
          Length = 1706

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    GTVVGIK 7
            GT++GIK
Sbjct: 1124 GTIIGIK 1130
>NP_001269786
          Length = 1694

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    GTVVGIK 7
            GT++GIK
Sbjct: 1124 GTIIGIK 1130
>NP_060688
          Length = 1247

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GTVVGIKNL 9
            G  +G+KNL
Sbjct: 1173 GDTIGVKNL 1181
>XP_005247601
          Length = 1484

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 914 GTIIGIK 920
>XP_006713735
          Length = 1656

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    GTVVGIK 7
            GT++GIK
Sbjct: 1124 GTIIGIK 1130
>XP_006713734
          Length = 1693

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1    GTVVGIK 7
            GT++GIK
Sbjct: 1124 GTIIGIK 1130
>XP_005246148
          Length = 1108

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GTVVGIKNL 9
            G  +G+KNL
Sbjct: 1034 GDTIGVKNL 1042
>XP_005246145
          Length = 1236

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GTVVGIKNL 9
            G  +G+KNL
Sbjct: 1162 GDTIGVKNL 1170
>XP_006712675
          Length = 1248

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1    GTVVGIKNL 9
            G  +G+KNL
Sbjct: 1174 GDTIGVKNL 1182
>NP_060959
          Length = 2964

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVG+ N
Sbjct: 362 GTVVGLVN 369
>XP_005245394
          Length = 1741

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVG+ N
Sbjct: 362 GTVVGLVN 369
>XP_005245393
          Length = 2663

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVG+ N
Sbjct: 362 GTVVGLVN 369
>XP_006711515
          Length = 2904

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVG+ N
Sbjct: 362 GTVVGLVN 369
>XP_006711514
          Length = 2964

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVG+ N
Sbjct: 362 GTVVGLVN 369
>XP_006711513
          Length = 2964

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           GTVVG+ N
Sbjct: 362 GTVVGLVN 369
>NP_115783
          Length = 878

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           GTVVG+ N+
Sbjct: 366 GTVVGLFNV 374
>NP_061752
          Length = 944

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           GTVVG+ N+
Sbjct: 366 GTVVGLFNV 374
>NP_037514
          Length = 750

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           G+V+ +KNL
Sbjct: 340 GSVITVKNL 348
>NP_000005
          Length = 1474

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           GT++G+K L
Sbjct: 485 GTLLGLKKL 493
>XP_006719119
          Length = 1512

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           GT++G+K L
Sbjct: 485 GTLLGLKKL 493
>NP_001267474
          Length = 1091

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 337 GLLVGLKN 344
>NP_060732
          Length = 1182

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 428 GLLVGLKN 435
>NP_443715
          Length = 1241

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>NP_443716
          Length = 1131

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 376 GLLVGLKN 383
>NP_001267470
          Length = 1234

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 479 GLLVGLKN 486
>NP_443711
          Length = 1292

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 538 GLLVGLKN 545
>NP_001267475
          Length = 1032

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 278 GLLVGLKN 285
>NP_714915
          Length = 995

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VVGIKNL 9
           VVG KNL
Sbjct: 701 VVGFKNL 707
>NP_001135773
          Length = 914

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VVGIKNL 9
           VVG KNL
Sbjct: 620 VVGFKNL 626
>NP_005338
          Length = 654

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  GTVVGI 6
          GTVVGI
Sbjct: 28 GTVVGI 33
>NP_001181966
          Length = 904

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GTVVGIKNL 9
           G  +G+KNL
Sbjct: 357 GYKIGVKNL 365
>NP_001071174
          Length = 904

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GTVVGIKNL 9
           G  +G+KNL
Sbjct: 357 GYKIGVKNL 365
>NP_079204
          Length = 368

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1  GTVVGIK 7
          GTV+G++
Sbjct: 61 GTVIGVR 67
>NP_061738
          Length = 932

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           GT++G+ N+
Sbjct: 363 GTIIGLFNV 371
>NP_114398
          Length = 823

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 8/9 (88%)

Query: 1   GTVVGIKNL 9
           GT++G+ N+
Sbjct: 363 GTIIGLFNV 371
>XP_006718040
          Length = 211

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1  GTVVGIK 7
          GTV+G++
Sbjct: 61 GTVIGVR 67
>XP_006718039
          Length = 368

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1  GTVVGIK 7
          GTV+G++
Sbjct: 61 GTVIGVR 67
>XP_006716750
          Length = 795

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VVGIKNL 9
           VVG KNL
Sbjct: 501 VVGFKNL 507
>XP_006716749
          Length = 894

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VVGIKNL 9
           VVG KNL
Sbjct: 600 VVGFKNL 606
>XP_006716748
          Length = 980

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3   VVGIKNL 9
           VVG KNL
Sbjct: 686 VVGFKNL 692
>XP_006715535
          Length = 946

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GTVVGIKNL 9
           G  +G+KNL
Sbjct: 357 GYKIGVKNL 365
>XP_006713758
          Length = 877

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>XP_006713757
          Length = 1034

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 278 GLLVGLKN 285
>XP_006713756
          Length = 1093

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 337 GLLVGLKN 344
>XP_005247668
          Length = 1132

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 376 GLLVGLKN 383
>XP_006713755
          Length = 1165

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 428 GLLVGLKN 435
>XP_005247667
          Length = 1183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 428 GLLVGLKN 435
>XP_005247666
          Length = 1183

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 428 GLLVGLKN 435
>XP_005247665
          Length = 1184

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 428 GLLVGLKN 435
>XP_005247664
          Length = 1191

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 435 GLLVGLKN 442
>XP_006713754
          Length = 1224

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>XP_006713753
          Length = 1225

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>XP_005247661
          Length = 1242

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>XP_006713752
          Length = 1242

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>XP_005247660
          Length = 1243

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G +VG+KN
Sbjct: 487 GLLVGLKN 494
>NP_001138409
          Length = 733

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1  GTVVGIK 7
          GTV G+K
Sbjct: 78 GTVTGLK 84
>NP_001269845
          Length = 845

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 711 GTVVGV 716
>NP_001243040
          Length = 959

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G V+G+KN
Sbjct: 270 GGVLGLKN 277
>NP_001243035
          Length = 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G V+G+KN
Sbjct: 332 GGVLGLKN 339
>NP_004249
          Length = 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G V+G+KN
Sbjct: 332 GGVLGLKN 339
>NP_001243038
          Length = 1021

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GTVVGIKN 8
           G V+G+KN
Sbjct: 332 GGVLGLKN 339
>NP_001265855
          Length = 616

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 343 GTMLGIK 349
>NP_001265856
          Length = 506

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 233 GTMLGIK 239
>NP_006036
          Length = 1047

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 267 GTVVGV 272
>NP_001269848
          Length = 876

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 721 GTVVGV 726
>NP_001265858
          Length = 490

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 217 GTMLGIK 223
>NP_057405
          Length = 479

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   VVGIKNL 9
           VVG++NL
Sbjct: 119 VVGVENL 125
>NP_065138
          Length = 500

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GT+VGI
Sbjct: 425 GTIVGI 430
>NP_001073863
          Length = 915

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 781 GTVVGV 786
>NP_056157
          Length = 646

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 373 GTMLGIK 379
>XP_006722047
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GT+VGI
Sbjct: 361 GTIVGI 366
>XP_006722046
          Length = 436

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GT+VGI
Sbjct: 361 GTIVGI 366
>XP_006722045
          Length = 497

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GT+VGI
Sbjct: 422 GTIVGI 427
>XP_006722044
          Length = 509

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GT+VGI
Sbjct: 434 GTIVGI 439
>XP_005251258
          Length = 420

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 286 GTVVGV 291
>XP_006716508
          Length = 553

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 419 GTVVGV 424
>XP_005251256
          Length = 604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 470 GTVVGV 475
>XP_006716507
          Length = 665

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 531 GTVVGV 536
>XP_005251255
          Length = 665

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 531 GTVVGV 536
>XP_005251254
          Length = 741

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 607 GTVVGV 612
>XP_005251253
          Length = 742

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 608 GTVVGV 613
>XP_005251252
          Length = 751

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 617 GTVVGV 622
>XP_005251250
          Length = 815

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 781 GTVVGV 786
>XP_006716506
          Length = 855

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 721 GTVVGV 726
>XP_005251246
          Length = 883

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTVVGI 6
           GTVVG+
Sbjct: 781 GTVVGV 786
>XP_005248532
          Length = 323

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GTVVGIK 7
          GT++GIK
Sbjct: 50 GTMLGIK 56
>XP_005248531
          Length = 346

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GTVVGIK 7
          GT++GIK
Sbjct: 73 GTMLGIK 79
>XP_006714646
          Length = 550

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 277 GTMLGIK 283
>XP_006714645
          Length = 604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1   GTVVGIK 7
           GT++GIK
Sbjct: 331 GTMLGIK 337
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.317    0.145    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 420,135
Number of extensions: 728
Number of successful extensions: 95
Number of sequences better than 10000.0: 95
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 95
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.6 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package