Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_542168 18 1482 NP_004295 18 1482 NP_002825 18 1482 XP_006719590 18 1482 XP_006719589 18 1482 NP_065769 16 5631 NP_001269281 16 5631 NP_112219 16 5631 XP_005272557 16 5631 XP_005272556 16 5631 XP_006722980 16 5631 XP_006722979 16 5631 XP_006721134 16 5631 XP_005255507 16 5631 NP_996763 16 5631 NP_597716 16 7355 XP_005266706 16 7355 XP_005266705 16 7355 XP_006722456 16 7355 XP_006711659 16 7355 XP_005277493 16 7355 XP_005277492 16 7355 XP_005277490 16 7355 XP_005277491 16 7355 XP_005277489 16 7355 NP_003628 16 7355 NP_056493 15 9605 NP_776167 15 9605 NP_116784 15 9605 NP_113660 15 9605 NP_001028850 15 9605 NP_004313 15 9605 NP_001153865 15 9605 NP_001153864 15 9605 NP_001153862 15 9605 NP_001153861 15 9605 XP_006721093 15 9605 XP_006721092 15 9605 XP_006721091 15 9605 XP_006719869 15 9605 XP_006719868 15 9605 XP_005266408 15 9605 XP_005266407 15 9605 XP_005266403 15 9605 XP_006719867 15 9605 XP_006719866 15 9605 XP_005266405 15 9605 XP_005266404 15 9605 XP_005274404 15 9605 XP_006718771 15 9605 XP_006718770 15 9605 XP_005274403 15 9605 XP_006718769 15 9605 XP_005274402 15 9605 XP_005245197 15 9605 XP_005245196 15 9605>NP_542168 Length = 460 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GTVLQLRQ 8 GTVLQL+Q Sbjct: 207 GTVLQLKQ 214>NP_004295 Length = 1620 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 GTVLQL QA Sbjct: 446 GTVLQLGQA 454>NP_002825 Length = 593 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GTVLQLRQ 8 GTVLQL+Q Sbjct: 207 GTVLQLKQ 214>XP_006719590 Length = 559 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GTVLQLRQ 8 GTVLQL+Q Sbjct: 207 GTVLQLKQ 214>XP_006719589 Length = 597 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GTVLQLRQ 8 GTVLQL+Q Sbjct: 207 GTVLQLKQ 214>NP_065769 Length = 1352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 GTV +LR+A Sbjct: 344 GTVARLREA 352>NP_001269281 Length = 590 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTVLQLRQ 8 GT QLRQ Sbjct: 260 GTTFQLRQ 267>NP_112219 Length = 1103 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTVLQLRQ 8 GT QLRQ Sbjct: 773 GTTFQLRQ 780>XP_005272557 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTVLQLRQ 8 GT QLRQ Sbjct: 294 GTTFQLRQ 301>XP_005272556 Length = 626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTVLQLRQ 8 GT QLRQ Sbjct: 296 GTTFQLRQ 303>XP_006722980 Length = 784 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTVLQLRQ 8 GT QLRQ Sbjct: 405 GTTFQLRQ 412>XP_006722979 Length = 1103 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTVLQLRQ 8 GT QLRQ Sbjct: 773 GTTFQLRQ 780>XP_006721134 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 GTV +LR+A Sbjct: 81 GTVARLREA 89>XP_005255507 Length = 1089 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 GTV +LR+A Sbjct: 81 GTVARLREA 89>NP_996763 Length = 315 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTVLQLRQA 9 GTVLQ+ A Sbjct: 224 GTVLQMHSA 232>NP_597716 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVLQLRQ 8 TVLQL+Q Sbjct: 211 TVLQLKQ 217>XP_005266706 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVLQLRQ 8 TVLQL+Q Sbjct: 20 TVLQLKQ 26>XP_005266705 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVLQLRQ 8 TVLQL+Q Sbjct: 211 TVLQLKQ 217>XP_006722456 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TVLQLRQ 8 TVLQL+Q Sbjct: 211 TVLQLKQ 217>XP_006711659 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 974 GSVLQLTEA 982>XP_005277493 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 1033 GSVLQLTEA 1041>XP_005277492 Length = 1119 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 1047 GSVLQLTEA 1055>XP_005277490 Length = 1143 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 1071 GSVLQLTEA 1079>XP_005277491 Length = 1143 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 1071 GSVLQLTEA 1079>XP_005277489 Length = 1181 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 1109 GSVLQLTEA 1117>NP_003628 Length = 1167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTVLQLRQA 9 G+VLQL +A Sbjct: 1095 GSVLQLTEA 1103>NP_056493 Length = 2946 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>NP_776167 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTVLQLR 7 GTVLQ++ Sbjct: 40 GTVLQIK 46>NP_116784 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTVLQLRQA 9 GT Q+RQ+ Sbjct: 136 GTATQMRQS 144>NP_113660 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 10 GTLLQLPQ 17>NP_001028850 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>NP_004313 Length = 168 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTVLQLRQA 9 GT Q+RQ+ Sbjct: 136 GTATQMRQS 144>NP_001153865 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>NP_001153864 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>NP_001153862 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>NP_001153861 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>XP_006721093 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTVLQLR 7 GTVLQ++ Sbjct: 40 GTVLQIK 46>XP_006721092 Length = 264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTVLQLR 7 GTVLQ++ Sbjct: 100 GTVLQIK 106>XP_006721091 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GTVLQLR 7 GTVLQ++ Sbjct: 100 GTVLQIK 106>XP_006719869 Length = 2943 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_006719868 Length = 2938 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_005266408 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_005266407 Length = 2641 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 312 GTVLQL 317>XP_005266403 Length = 2941 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_006719867 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_006719866 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_005266405 Length = 2964 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_005266404 Length = 2967 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTVLQL 6 GTVLQL Sbjct: 638 GTVLQL 643>XP_005274404 Length = 205 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 10 GTLLQLPQ 17>XP_006718771 Length = 237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>XP_006718770 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>XP_005274403 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>XP_006718769 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>XP_005274402 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTVLQLRQ 8 GT+LQL Q Sbjct: 59 GTLLQLPQ 66>XP_005245197 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLQLRQA 9 +LQ+RQA Sbjct: 300 ILQMRQA 306>XP_005245196 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VLQLRQA 9 +LQ+RQA Sbjct: 300 ILQMRQA 306Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.134 0.343 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 368,822 Number of extensions: 428 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |