Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_001136013 18 1935 NP_057032 18 1935 XP_006715167 18 1935 XP_005249215 18 1935 XP_006715166 18 1935 XP_006715165 18 1935 XP_005249214 18 1935 XP_005249213 18 1935 NP_057664 17 2528 NP_001899 17 4312 NP_680091 17 4312 NP_680093 17 4312 NP_680090 17 4312 NP_680092 17 4312 XP_006716308 17 4312 XP_006716307 17 4312 NP_002412 16 5631 NP_001139410 16 5631 NP_079040 16 5631 NP_001243657 16 5631 NP_001243656 16 5631 NP_001243654 16 5631 NP_006581 16 5631 XP_006711986 16 5631 XP_006711985 16 5631 NP_115943 16 7355 NP_001231509 15 9605 NP_003487 15 9605 NP_001180511 15 9605 NP_001180513 15 9605 NP_001180512 15 9605 NP_005001 15 9605 NP_001032209 15 9605 NP_004437 15 9605 NP_001073920 15 9605 XP_005250442 15 9605 XP_006716077 15 9605 XP_006716076 15 9605 XP_005250440 15 9605 XP_006716075 15 9605 XP_005250437 15 9605 XP_006716074 15 9605 XP_006716073 15 9605 XP_006716072 15 9605 XP_006716071 15 9605 XP_006716070 15 9605 XP_006716069 15 9605 XP_006716068 15 9605 XP_005250430 15 9605 XP_006716067 15 9605 XP_006716066 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTTYMIIAN 9 GTTY IIAN Sbjct: 3331 GTTYRIIAN 3339>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTTYMIIAN 9 GTTY IIAN Sbjct: 3331 GTTYRIIAN 3339>NP_001136013 Length = 401 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 143 GKTYMIIA 150>NP_057032 Length = 401 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 143 GKTYMIIA 150>XP_006715167 Length = 285 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 145 GKTYMIIA 152>XP_005249215 Length = 369 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 111 GKTYMIIA 118>XP_006715166 Length = 372 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 145 GKTYMIIA 152>XP_006715165 Length = 401 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 143 GKTYMIIA 150>XP_005249214 Length = 401 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 143 GKTYMIIA 150>XP_005249213 Length = 403 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTTYMIIA 8 G TYMIIA Sbjct: 145 GKTYMIIA 152>NP_057664 Length = 1184 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 G TYM++ N Sbjct: 407 GNTYMLLTN 415>NP_001899 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>NP_680091 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>NP_680093 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>NP_680090 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>NP_680092 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>XP_006716308 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>XP_006716307 Length = 339 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y ++AN Sbjct: 290 GTPYWLVAN 298>NP_002412 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTTYMIIAN 9 G TY +AN Sbjct: 387 GKTYFFVAN 395>NP_001139410 Length = 403 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTTYMIIAN 9 G TY +AN Sbjct: 321 GKTYFFVAN 329>NP_079040 Length = 1116 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 G T+ +IAN Sbjct: 437 GNTFQLIAN 445>NP_001243657 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTYMIIAN 9 TTY +IAN Sbjct: 392 TTYDLIAN 399>NP_001243656 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTYMIIAN 9 TTY +IAN Sbjct: 417 TTYDLIAN 424>NP_001243654 Length = 565 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTYMIIAN 9 TTY +IAN Sbjct: 495 TTYDLIAN 502>NP_006581 Length = 565 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTYMIIAN 9 TTY +IAN Sbjct: 495 TTYDLIAN 502>XP_006711986 Length = 296 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTYMIIAN 9 TTY +IAN Sbjct: 226 TTYDLIAN 233>XP_006711985 Length = 296 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TTYMIIAN 9 TTY +IAN Sbjct: 226 TTYDLIAN 233>NP_115943 Length = 346 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 GT Y+++ N Sbjct: 146 GTVYLLLEN 154>NP_001231509 Length = 3859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 G TY+ +AN Sbjct: 611 GQTYIRVAN 619>NP_003487 Length = 3830 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTTYMIIAN 9 G TY+ +AN Sbjct: 611 GQTYIRVAN 619>NP_001180511 Length = 1211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>NP_001180513 Length = 1180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 443 TLYQVIAN 450>NP_001180512 Length = 1192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 443 TLYQVIAN 450>NP_005001 Length = 1183 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 456 TLYQVIAN 463>NP_001032209 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>NP_004437 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TYMIIAN 9 T+M++AN Sbjct: 1422 THMVVAN 1428>NP_001073920 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 TYMIIAN 9 T+M++AN Sbjct: 203 TFMVLAN 209>XP_005250442 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716077 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716076 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 366 TLYQVIAN 373>XP_005250440 Length = 1214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716075 Length = 1215 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_005250437 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 456 TLYQVIAN 463>XP_006716074 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716073 Length = 1266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716072 Length = 1289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 443 TLYQVIAN 450>XP_006716071 Length = 1292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 456 TLYQVIAN 463>XP_006716070 Length = 1296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716069 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716068 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 456 TLYQVIAN 463>XP_005250430 Length = 1304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716067 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469>XP_006716066 Length = 1308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 TTYMIIAN 9 T Y +IAN Sbjct: 462 TLYQVIAN 469Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.134 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 386,862 Number of extensions: 532 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |