Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_005913                                                              20     390
XP_005267045                                                           20     390
NP_777602                                                              17    2528
XP_006726836                                                           17    2528
XP_006723018                                                           17    2528
XP_005268862                                                           17    2528
XP_005268861                                                           17    2528
XP_006710104                                                           17    2528
NP_005566                                                              17    3301
NP_787116                                                              17    3301
NP_060875                                                              17    3301
XP_005258057                                                           17    3301
NP_001182502                                                           17    4312
NP_001258211                                                           17    4312
NP_620595                                                              17    4312
NP_620594                                                              17    4312
NP_620596                                                              17    4312
NP_085124                                                              17    4312
NP_803187                                                              17    4312
NP_005091                                                              17    4312
NP_443094                                                              17    4312
NP_653080                                                              17    4312
NP_065859                                                              17    4312
XP_006720786                                                           17    4312
XP_005267292                                                           17    4312
XP_005267291                                                           17    4312
XP_005267290                                                           17    4312
XP_006711862                                                           17    4312
XP_005273271                                                           17    4312
XP_005273270                                                           17    4312
XP_005273269                                                           17    4312
XP_005273268                                                           17    4312
XP_005273266                                                           17    4312
XP_006711861                                                           17    4312
XP_005245662                                                           17    4312
NP_116197                                                              17    4312
NP_060164                                                              16    5631
XP_006720120                                                           16    5631
XP_006720119                                                           16    5631
XP_005246713                                                           16    5631
XP_005246712                                                           16    5631
XP_005246711                                                           16    5631
NP_689659                                                              16    5631
NP_803875                                                              16    5631
NP_061978                                                              16    7355
NP_542410                                                              16    7355
NP_542411                                                              16    7355
NP_542412                                                              16    7355
NP_001273331                                                           16    7355
NP_000237                                                              16    7355
NP_001772                                                              16    7355
NP_891549                                                              16    7355
NP_757385                                                              16    7355
NP_115807                                                              16    7355
NP_059122                                                              16    7355
NP_001265532                                                           16    7355
NP_001254505                                                           16    7355
NP_694942                                                              16    7355
XP_006720946                                                           16    7355
XP_005255380                                                           16    7355
XP_006720945                                                           16    7355
XP_006720944                                                           16    7355
XP_005255378                                                           16    7355
XP_005255377                                                           16    7355
XP_006720943                                                           16    7355
XP_006714301                                                           16    7355
XP_006714300                                                           16    7355
XP_006714299                                                           16    7355
NP_003473                                                              15    9605
NP_055068                                                              15    9605
NP_001156750                                                           15    9605
NP_001156751                                                           15    9605
NP_001015892                                                           15    9605
NP_001136019                                                           15    9605
NP_775930                                                              15    9605
NP_689624                                                              15    9605
NP_653252                                                              15    9605
NP_203754                                                              15    9605
NP_003178                                                              15    9605
XP_006724788                                                           15    9605
XP_006719679                                                           15    9605
XP_005269219                                                           15    9605
XP_006719678                                                           15    9605
XP_006719677                                                           15    9605
XP_006718788                                                           15    9605
XP_005274419                                                           15    9605
XP_005251225                                                           15    9605
XP_006716483                                                           15    9605
XP_005251224                                                           15    9605
>NP_005913
          Length = 1608

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2    TRSMPSDA 9
            TRSMPSDA
Sbjct: 1176 TRSMPSDA 1183
>XP_005267045
          Length = 1604

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 2    TRSMPSDA 9
            TRSMPSDA
Sbjct: 1172 TRSMPSDA 1179
>NP_777602
          Length = 694

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTRSMPSD 8
           GT+S PSD
Sbjct: 534 GTQSQPSD 541
>XP_006726836
          Length = 372

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GTRSMPSDA 9
          G+R+ PSDA
Sbjct: 26 GSRAAPSDA 34
>XP_006723018
          Length = 372

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GTRSMPSDA 9
          G+R+ PSDA
Sbjct: 26 GSRAAPSDA 34
>XP_005268862
          Length = 694

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTRSMPSD 8
           GT+S PSD
Sbjct: 534 GTQSQPSD 541
>XP_005268861
          Length = 694

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GTRSMPSD 8
           GT+S PSD
Sbjct: 534 GTQSQPSD 541
>XP_006710104
          Length = 372

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GTRSMPSDA 9
          G+R+ PSDA
Sbjct: 26 GSRAAPSDA 34
>NP_005566
          Length = 1025

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   GTRSMPSD 8
           GT+S+P+D
Sbjct: 851 GTQSLPTD 858
>NP_787116
          Length = 1011

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   GTRSMPSD 8
           GT+S+P+D
Sbjct: 837 GTQSLPTD 844
>NP_060875
          Length = 184

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1  GTRSMPSDA 9
          GT+S+P+D+
Sbjct: 58 GTQSIPNDS 66
>XP_005258057
          Length = 172

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1  GTRSMPSDA 9
          GT+S+P+D+
Sbjct: 46 GTQSIPNDS 54
>NP_001182502
          Length = 1829

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            G RS+P+D
Sbjct: 1081 GVRSLPAD 1088
>NP_001258211
          Length = 1922

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            G RS+P+D
Sbjct: 1081 GVRSLPAD 1088
>NP_620595
          Length = 1340

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GTRSMPS 7
           GTR MPS
Sbjct: 474 GTRCMPS 480
>NP_620594
          Length = 1427

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GTRSMPS 7
           GTR MPS
Sbjct: 505 GTRCMPS 511
>NP_620596
          Length = 1371

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GTRSMPS 7
           GTR MPS
Sbjct: 505 GTRCMPS 511
>NP_085124
          Length = 1922

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            G RS+P+D
Sbjct: 1081 GVRSLPAD 1088
>NP_803187
          Length = 1922

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            G RS+P+D
Sbjct: 1081 GVRSLPAD 1088
>NP_005091
          Length = 1782

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GT+S+P D
Sbjct: 1671 GTKSVPED 1678
>NP_443094
          Length = 416

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GTRSMPSDA 9
           G RS PS+A
Sbjct: 129 GVRSRPSEA 137
>NP_653080
          Length = 1684

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GT+S+P D
Sbjct: 1573 GTKSVPED 1580
>NP_065859
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_006720786
          Length = 614

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  GTRSMPS 7
          G RSMPS
Sbjct: 5  GVRSMPS 11
>XP_005267292
          Length = 1677

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GT+S+P D
Sbjct: 1566 GTKSVPED 1573
>XP_005267291
          Length = 1684

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GT+S+P D
Sbjct: 1573 GTKSVPED 1580
>XP_005267290
          Length = 1782

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GT+S+P D
Sbjct: 1671 GTKSVPED 1678
>XP_006711862
          Length = 1704

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_005273271
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_005273270
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_005273269
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_005273268
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_005273266
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_006711861
          Length = 1722

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GTRSMPSD 8
            GTRS PS+
Sbjct: 1116 GTRSSPSN 1123
>XP_005245662
          Length = 386

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GTRSMPSDA 9
           G RS PS+A
Sbjct: 99  GVRSRPSEA 107
>NP_116197
          Length = 620

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1  GTRSMPS 7
          G RSMPS
Sbjct: 11 GVRSMPS 17
>NP_060164
          Length = 791

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TRSMPSD 8
           T+S+PSD
Sbjct: 267 TKSLPSD 273
>XP_006720120
          Length = 1055

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GTRSMPS 7
          GTRS+P+
Sbjct: 28 GTRSLPT 34
>XP_006720119
          Length = 1094

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GTRSMPS 7
          GTRS+P+
Sbjct: 28 GTRSLPT 34
>XP_005246713
          Length = 735

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TRSMPSD 8
           T+S+PSD
Sbjct: 267 TKSLPSD 273
>XP_005246712
          Length = 791

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TRSMPSD 8
           T+S+PSD
Sbjct: 267 TKSLPSD 273
>XP_005246711
          Length = 791

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   TRSMPSD 8
           T+S+PSD
Sbjct: 267 TKSLPSD 273
>NP_689659
          Length = 1094

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GTRSMPS 7
          GTRS+P+
Sbjct: 28 GTRSLPT 34
>NP_803875
          Length = 4243

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   TRSMPSDA 9
           TR+MP D+
Sbjct: 102 TRAMPEDS 109
>NP_061978
          Length = 4242

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   GTRSMPSD 8
           GTR+ P D
Sbjct: 493 GTRACPGD 500
>NP_542410
          Length = 1629

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   GTRSMPSD 8
           G R MP D
Sbjct: 437 GARGMPGD 444
>NP_542411
          Length = 1736

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   GTRSMPSD 8
           G R MP D
Sbjct: 544 GARGMPGD 551
>NP_542412
          Length = 1650

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   GTRSMPSD 8
           G R MP D
Sbjct: 458 GARGMPGD 465
>NP_001273331
          Length = 1131

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 838 GTRLTPPDA 846
>NP_000237
          Length = 1130

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 837 GTRLTPPDA 845
>NP_001772
          Length = 199

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2  TRSMPSDA 9
          T SMPSD+
Sbjct: 73 TFSMPSDS 80
>NP_891549
          Length = 712

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GTRSMP 6
           GTRS+P
Sbjct: 174 GTRSLP 179
>NP_757385
          Length = 617

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   GTRSMPSD 8
           GT  MP D
Sbjct: 588 GTEEMPED 595
>NP_115807
          Length = 616

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 5/8 (62%)

Query: 1   GTRSMPSD 8
           GT  MP D
Sbjct: 587 GTEEMPED 594
>NP_059122
          Length = 507

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   GTRSMPSD 8
           GT+++P D
Sbjct: 229 GTKTLPDD 236
>NP_001265532
          Length = 459

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   GTRSMPSD 8
           GT+++P D
Sbjct: 181 GTKTLPDD 188
>NP_001254505
          Length = 1118

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  GTRSMPSDA 9
          G+RS P D+
Sbjct: 36 GSRSRPGDS 44
>NP_694942
          Length = 1123

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1  GTRSMPSDA 9
          G+RS P D+
Sbjct: 36 GSRSRPGDS 44
>XP_006720946
          Length = 1081

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 788 GTRLTPPDA 796
>XP_005255380
          Length = 1082

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 789 GTRLTPPDA 797
>XP_006720945
          Length = 1096

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 803 GTRLTPPDA 811
>XP_006720944
          Length = 1097

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 804 GTRLTPPDA 812
>XP_005255378
          Length = 1145

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 852 GTRLTPPDA 860
>XP_005255377
          Length = 1146

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 853 GTRLTPPDA 861
>XP_006720943
          Length = 1208

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1   GTRSMPSDA 9
           GTR  P DA
Sbjct: 915 GTRLTPPDA 923
>XP_006714301
          Length = 303

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   GTRSMPSD 8
           GT+++P D
Sbjct: 229 GTKTLPDD 236
>XP_006714300
          Length = 327

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1  GTRSMPSD 8
          GT+++P D
Sbjct: 49 GTKTLPDD 56
>XP_006714299
          Length = 327

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1  GTRSMPSD 8
          GT+++P D
Sbjct: 49 GTKTLPDD 56
>NP_003473
          Length = 5537

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    RSMPSD 8
            RS+PSD
Sbjct: 2401 RSLPSD 2406
>NP_055068
          Length = 2725

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TRSMPSDA 9
           TRS PS A
Sbjct: 223 TRSQPSPA 230
>NP_001156750
          Length = 2732

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TRSMPSDA 9
           TRS PS A
Sbjct: 223 TRSQPSPA 230
>NP_001156751
          Length = 2731

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2   TRSMPSDA 9
           TRS PS A
Sbjct: 223 TRSQPSPA 230
>NP_001015892
          Length = 264

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  RSMPSDA 9
          +SMP DA
Sbjct: 10 KSMPKDA 16
>NP_001136019
          Length = 336

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  GTRSMPSDA 9
          G R +P DA
Sbjct: 27 GVRPVPEDA 35
>NP_775930
          Length = 351

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  GTRSMPSDA 9
          G R +P DA
Sbjct: 27 GVRPVPEDA 35
>NP_689624
          Length = 782

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   GTRSMPSDA 9
           G RS+P D+
Sbjct: 302 GKRSLPVDS 310
>NP_653252
          Length = 1463

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    RSMPSDA 9
            R MPSD+
Sbjct: 1453 RGMPSDS 1459
>NP_203754
          Length = 1729

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RSMPSD 8
           RS+PSD
Sbjct: 243 RSLPSD 248
>NP_003178
          Length = 264

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3  RSMPSDA 9
          +SMP DA
Sbjct: 10 KSMPKDA 16
>XP_006724788
          Length = 2570

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 2  TRSMPSDA 9
          TRS PS A
Sbjct: 69 TRSQPSPA 76
>XP_006719679
          Length = 5536

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    RSMPSD 8
            RS+PSD
Sbjct: 2400 RSLPSD 2405
>XP_005269219
          Length = 5537

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    RSMPSD 8
            RS+PSD
Sbjct: 2401 RSLPSD 2406
>XP_006719678
          Length = 5539

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    RSMPSD 8
            RS+PSD
Sbjct: 2403 RSLPSD 2408
>XP_006719677
          Length = 5540

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3    RSMPSD 8
            RS+PSD
Sbjct: 2404 RSLPSD 2409
>XP_006718788
          Length = 1729

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RSMPSD 8
           RS+PSD
Sbjct: 243 RSLPSD 248
>XP_005274419
          Length = 1808

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 3   RSMPSD 8
           RS+PSD
Sbjct: 322 RSLPSD 327
>XP_005251225
          Length = 848

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   RSMPSDA 9
           R MPSD+
Sbjct: 838 RGMPSDS 844
>XP_006716483
          Length = 1367

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    RSMPSDA 9
            R MPSD+
Sbjct: 1357 RGMPSDS 1363
>XP_005251224
          Length = 1439

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3    RSMPSDA 9
            R MPSD+
Sbjct: 1429 RGMPSDS 1435
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.303    0.116    0.323 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 637,285
Number of extensions: 1436
Number of successful extensions: 89
Number of sequences better than 10000.0: 89
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 89
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.3 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package