Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 869 NP_001263689 19 869 NP_001119584 19 869 NP_001119586 19 869 NP_001263625 19 869 NP_001119590 19 869 NP_001263690 19 869 NP_001119585 19 869 NP_001263624 19 869 NP_001119588 19 869 NP_001119587 19 869 NP_001119589 19 869 NP_079410 17 4312 XP_006723706 17 4312 XP_006723701 17 4312 XP_006723700 17 4312 XP_006723699 17 4312 XP_006723698 17 4312 XP_006723697 17 4312 XP_006723696 17 4312 XP_006723695 17 4312 XP_005256233 17 4312 XP_005256232 17 4312 XP_005256231 17 4312 XP_005256229 17 4312 XP_005256228 17 4312 XP_005256227 17 4312 XP_006721346 17 4312 XP_005256226 17 4312 XP_006721345 17 4312 XP_006721344 17 4312 XP_006721343 17 4312 XP_005256225 17 4312 NP_055064 16 5631 NP_000869 16 5631 NP_057430 16 5631 NP_001265543 16 7355 NP_003352 16 7355 NP_001008390 16 7355 NP_277042 16 7355 NP_277043 16 7355 NP_000153 16 7355 NP_066988 16 7355 NP_003310 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_596869 16 7355 XP_006721151 16 7355 XP_006721150 16 7355 XP_006721149 16 7355 XP_006721148 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 XP_005245436 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_115495 15 9605 NP_954714 15 9605 NP_077271 15 9605 NP_055587 15 9605 NP_001135869 15 9605 NP_001078945 15 9605 NP_001119806 15 9605 NP_001128143 15 9605 XP_006722652 15 9605 XP_006722651 15 9605 XP_006722650 15 9605 XP_006722649 15 9605 XP_006722648 15 9605 XP_006722647 15 9605 XP_006722646 15 9605 XP_005258449 15 9605 XP_006716720 15 9605 NP_954586 15 9605>NP_000537 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 154 GTRVRAMAI 162>NP_001263689 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 115 GTRVRAMAI 123>NP_001119584 Length = 393 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 154 GTRVRAMAI 162>NP_001119586 Length = 341 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 154 GTRVRAMAI 162>NP_001263625 Length = 302 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 115 GTRVRAMAI 123>NP_001119590 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 115 GTRVRAMAI 123>NP_001263690 Length = 354 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 115 GTRVRAMAI 123>NP_001119585 Length = 346 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 154 GTRVRAMAI 162>NP_001263624 Length = 307 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 115 GTRVRAMAI 123>NP_001119588 Length = 209 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 22 GTRVRAMAI 30>NP_001119587 Length = 261 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 22 GTRVRAMAI 30>NP_001119589 Length = 214 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTR RAMAI Sbjct: 22 GTRVRAMAI 30>NP_079410 Length = 2881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006723706 Length = 560 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 417 GTRFRA 422>XP_006723701 Length = 863 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 397 GTRFRA 402>XP_006723700 Length = 869 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 403 GTRFRA 408>XP_006723699 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 404 GTRFRA 409>XP_006723698 Length = 876 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 410 GTRFRA 415>XP_006723697 Length = 882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 416 GTRFRA 421>XP_006723696 Length = 882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 417 GTRFRA 422>XP_006723695 Length = 883 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRFRA Sbjct: 417 GTRFRA 422>XP_005256233 Length = 2391 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1360 TKFRAMA 1366>XP_005256232 Length = 2424 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1393 TKFRAMA 1399>XP_005256231 Length = 2573 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256229 Length = 2881 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256228 Length = 2882 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256227 Length = 2897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721346 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256226 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721345 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721344 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_006721343 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>XP_005256225 Length = 2898 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 TRFRAMA 8 T+FRAMA Sbjct: 1867 TKFRAMA 1873>NP_055064 Length = 410 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRFRAMAI 9 +RFRA+A+ Sbjct: 308 SRFRALAV 315>NP_000869 Length = 551 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTRFRAMAI 9 G R+R MAI Sbjct: 113 GVRWRVMAI 121>NP_057430 Length = 367 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TRFRAMAI 9 +RFRA+A+ Sbjct: 308 SRFRALAV 315>NP_001265543 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 617 GTRFRSGSV 625>NP_003352 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 584 GTRFRSGSV 592>NP_001008390 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 584 GTRFRSGSV 592>NP_277042 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTRFRAMAI 9 GT FR M + Sbjct: 82 GTNFRVMLV 90>NP_277043 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTRFRAMAI 9 GT FR M + Sbjct: 80 GTNFRVMLV 88>NP_000153 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GTRFRAMAI 9 GT FR M + Sbjct: 81 GTNFRVMLV 89>NP_066988 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GTRFRAM 7 GTRFR + Sbjct: 6 GTRFRGL 12>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 9178 QFRAMAI 9184>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 9303 QFRAMAI 9309>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 16602 QFRAMAI 16608>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 15675 QFRAMAI 15681>XP_006721151 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 584 GTRFRSGSV 592>XP_006721150 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 584 GTRFRSGSV 592>XP_006721149 Length = 640 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 584 GTRFRSGSV 592>XP_006721148 Length = 668 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GTRFR+ ++ Sbjct: 612 GTRFRSGSV 620>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 4915 QFRAMAI 4921>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 6274 QFRAMAI 6280>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 16230 QFRAMAI 16236>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 17736 QFRAMAI 17742>XP_005245436 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GTRFRAM 7 GTRFR + Sbjct: 6 GTRFRGL 12>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 18243 QFRAMAI 18249>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RFRAMAI 9 +FRAMAI Sbjct: 9370 QFRAMAI 9376>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTRFRAMAI 9 G RF+A+ I Sbjct: 3145 GVRFKALQI 3153>NP_954714 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GT+FRA Sbjct: 87 GTKFRA 92>NP_077271 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRF+A Sbjct: 147 GTRFKA 152>NP_055587 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 445 GTKFRSLLL 453>NP_001135869 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 447 GTKFRSLLL 455>NP_001078945 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GT+FRA Sbjct: 87 GTKFRA 92>NP_001119806 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GT+FRA Sbjct: 87 GTKFRA 92>NP_001128143 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRF+A Sbjct: 147 GTRFKA 152>XP_006722652 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 447 GTKFRSLLL 455>XP_006722651 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 447 GTKFRSLLL 455>XP_006722650 Length = 600 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 447 GTKFRSLLL 455>XP_006722649 Length = 614 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 461 GTKFRSLLL 469>XP_006722648 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 463 GTKFRSLLL 471>XP_006722647 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 463 GTKFRSLLL 471>XP_006722646 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 463 GTKFRSLLL 471>XP_005258449 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GTRFRAMAI 9 GT+FR++ + Sbjct: 463 GTKFRSLLL 471>XP_006716720 Length = 151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GTRF+A Sbjct: 47 GTRFKA 52>NP_954586 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTRFRA 6 GT+FRA Sbjct: 87 GTKFRA 92Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.144 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 272,549 Number of extensions: 379 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |