Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 509 NP_858045 20 509 NP_006525 20 509 NP_001167559 20 509 NP_001367 17 4312 NP_001148 16 5631 NP_665875 16 5631 NP_001265336 16 5631 NP_001265337 16 5631 NP_001265338 16 5631 NP_665876 16 5631 NP_001014811 16 5631 NP_006671 16 5631 NP_001155058 16 5631 NP_001171992 16 5631 XP_006718486 16 5631 XP_005273774 16 5631 XP_006717877 16 5631 XP_006717876 16 5631 XP_005269799 16 5631 XP_005269798 16 5631 NP_085128 16 7355 NP_036265 16 7355 NP_001276962 16 7355 NP_997244 15 9605 NP_001273304 15 9605 NP_000878 15 9605 NP_001127958 15 9605 NP_443174 15 9605 NP_006142 15 9605 NP_001265441 15 9605 NP_001265440 15 9605 NP_004635 15 9605 NP_001153574 15 9605 NP_060239 15 9605 NP_777573 15 9605 XP_005258606 15 9605 XP_006723100 15 9605 XP_006720769 15 9605 XP_006720768 15 9605 XP_006720767 15 9605 XP_005267442 15 9605 NP_653289 15 9605>NP_001167558 Length = 1423 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTQNRSLLR 9 GTQNR LLR Sbjct: 1023 GTQNRPLLR 1031>NP_858045 Length = 1424 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTQNRSLLR 9 GTQNR LLR Sbjct: 1023 GTQNRPLLR 1031>NP_006525 Length = 1420 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTQNRSLLR 9 GTQNR LLR Sbjct: 1023 GTQNRPLLR 1031>NP_001167559 Length = 1415 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTQNRSLLR 9 GTQNR LLR Sbjct: 1018 GTQNRPLLR 1026>NP_001367 Length = 4646 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTQNRSLLR 9 GT NR++LR Sbjct: 2749 GTFNRAMLR 2757>NP_001148 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>NP_665875 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>NP_001265336 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>NP_001265337 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>NP_001265338 Length = 472 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 415 GTKDRTLIR 423>NP_665876 Length = 505 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>NP_001014811 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTQNRSLLR 9 GT N LLR Sbjct: 231 GTNNEELLR 239>NP_006671 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTQNRSLLR 9 GT N LLR Sbjct: 231 GTNNEELLR 239>NP_001155058 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTQNRSLLR 9 GT N LLR Sbjct: 231 GTNNEELLR 239>NP_001171992 Length = 415 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTQNRSLL 8 GT+N SLL Sbjct: 133 GTKNESLL 140>XP_006718486 Length = 313 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTQNRSLLR 9 GT N LLR Sbjct: 231 GTNNEELLR 239>XP_005273774 Length = 604 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTQNRSLLR 9 GT N LLR Sbjct: 231 GTNNEELLR 239>XP_006717877 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>XP_006717876 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>XP_005269799 Length = 542 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 448 GTKDRTLIR 456>XP_005269798 Length = 605 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTQNRSLLR 9 GT++R+L+R Sbjct: 548 GTKDRTLIR 556>NP_085128 Length = 2136 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTQNRSLLR 9 G QN SLL+ Sbjct: 174 GVQNPSLLK 182>NP_036265 Length = 871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTQNRSLL 8 G QN SLL Sbjct: 499 GAQNESLL 506>NP_001276962 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GTQNRSLL 8 G QN SLL Sbjct: 499 GAQNESLL 506>NP_997244 Length = 3169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTQNRSLLR 9 G QN +L+R Sbjct: 2233 GEQNETLIR 2241>NP_001273304 Length = 1169 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQNRSLLR 9 T+NRSL R Sbjct: 695 TKNRSLSR 702>NP_000878 Length = 1163 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TQNRSLLR 9 T+NRSL R Sbjct: 695 TKNRSLSR 702>NP_001127958 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 562 QNRSLL 567>NP_443174 Length = 586 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 562 QNRSLL 567>NP_006142 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 211 QNRSLL 216>NP_001265441 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TQNRSLL 8 TQN SLL Sbjct: 255 TQNESLL 261>NP_001265440 Length = 1050 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TQNRSLL 8 TQN SLL Sbjct: 223 TQNESLL 229>NP_004635 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TQNRSLL 8 TQN SLL Sbjct: 255 TQNESLL 261>NP_001153574 Length = 629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 128 QNRSLL 133>NP_060239 Length = 706 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTQNRSLLR 9 G+Q++ LLR Sbjct: 329 GSQSKDLLR 337>NP_777573 Length = 636 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTQNRSLLR 9 G QN+ L+R Sbjct: 585 GEQNQELIR 593>XP_005258606 Length = 554 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 238 QNRSLL 243>XP_006723100 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 238 QNRSLL 243>XP_006720769 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TQNRSLL 8 TQN SLL Sbjct: 211 TQNESLL 217>XP_006720768 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TQNRSLL 8 TQN SLL Sbjct: 211 TQNESLL 217>XP_006720767 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TQNRSLL 8 TQN SLL Sbjct: 225 TQNESLL 231>XP_005267442 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTQNRSLLR 9 G QN+ L+R Sbjct: 599 GEQNQELIR 607>NP_653289 Length = 562 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 QNRSLL 8 QNRSLL Sbjct: 238 QNRSLL 243Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.131 0.345 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 443,511 Number of extensions: 860 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |