Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001107228 18 1482 NP_001244918 18 1482 NP_001107227 18 1482 NP_001944 18 1482 NP_001244917 18 1482 NP_001185761 18 1935 NP_001185763 18 1935 NP_055459 18 1935 XP_006726410 18 1935 XP_006711719 18 1935 XP_006711718 18 1935 XP_006711717 18 1935 XP_006711716 18 1935 XP_006711715 18 1935 XP_006711714 18 1935 XP_006711713 18 1935 XP_006711712 18 1935 XP_006711711 18 1935 XP_006711710 18 1935 XP_006711709 18 1935 XP_005277503 18 1935 XP_005273038 18 1935 XP_006711708 18 1935 XP_005277500 18 1935 XP_006711707 18 1935 XP_005277499 18 1935 XP_006711706 18 1935 XP_006711705 18 1935 XP_006711164 18 1935 XP_006710140 18 1935 NP_001164160 17 4312 NP_543151 17 4312 NP_001164157 17 4312 NP_001164158 17 4312 NP_001164159 17 4312 XP_005254804 17 4312 XP_006720791 17 4312 XP_005254803 17 4312 XP_005254800 17 4312 XP_005254799 17 4312 XP_006710438 17 4312 XP_006710437 17 4312 XP_006710436 17 4312 XP_006710435 17 4312 XP_006710434 17 4312 XP_006710433 17 4312 XP_006710432 17 4312 XP_006710431 17 4312 XP_006710430 17 4312 XP_006710429 17 4312 NP_003913 17 4312 NP_001004746 17 4312 NP_001171559 16 5631 NP_003889 16 5631 NP_001097 16 5631 XP_005267257 16 5631 XP_005267256 16 5631 XP_005267255 16 5631 XP_006715655 16 5631 XP_005267254 16 5631 XP_006715654 16 5631 XP_005265640 16 5631 NP_001186209 16 7355 NP_619515 16 7355 NP_005320 16 7355 XP_005255978 16 7355 XP_005255977 16 7355 NP_001004745 16 7355 NP_001004747 16 7355 NP_444511 15 9605 NP_004201 15 9605 NP_001092314 15 9605 NP_001132986 15 9605 XP_005270327 15 9605 XP_005270326 15 9605>NP_001107228 Length = 482 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GT+ELVR L Sbjct: 387 GTVELVRAL 395>NP_001244918 Length = 487 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GT+ELVR L Sbjct: 392 GTVELVRAL 400>NP_001107227 Length = 482 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GT+ELVR L Sbjct: 387 GTVELVRAL 395>NP_001944 Length = 482 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GT+ELVR L Sbjct: 387 GTVELVRAL 395>NP_001244917 Length = 482 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GT+ELVR L Sbjct: 387 GTVELVRAL 395>NP_001185761 Length = 2240 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1686 GTIELGRIL 1694>NP_001185763 Length = 2362 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1792 GTIELGRIL 1800>NP_055459 Length = 2346 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1792 GTIELGRIL 1800>XP_006726410 Length = 2087 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1533 GTIELGRIL 1541>XP_006711719 Length = 2302 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1748 GTIELGRIL 1756>XP_006711718 Length = 1436 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 799 GTIELGRIL 807>XP_006711717 Length = 2385 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1748 GTIELGRIL 1756>XP_006711716 Length = 2411 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1857 GTIELGRIL 1865>XP_006711715 Length = 2428 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1791 GTIELGRIL 1799>XP_006711714 Length = 2429 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1792 GTIELGRIL 1800>XP_006711713 Length = 2432 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1795 GTIELGRIL 1803>XP_006711712 Length = 2473 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_006711711 Length = 2482 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1845 GTIELGRIL 1853>XP_006711710 Length = 2494 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1857 GTIELGRIL 1865>XP_006711709 Length = 2495 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1858 GTIELGRIL 1866>XP_005277503 Length = 2498 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_005273038 Length = 2509 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_006711708 Length = 2512 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_005277500 Length = 2525 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_006711707 Length = 2553 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_005277499 Length = 2561 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_006711706 Length = 2591 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1954 GTIELGRIL 1962>XP_006711705 Length = 2592 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1955 GTIELGRIL 1963>XP_006711164 Length = 2087 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 1533 GTIELGRIL 1541>XP_006710140 Length = 290 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 GTIEL RIL Sbjct: 45 GTIELGRIL 53>NP_001164160 Length = 753 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 411 GQVELIRLL 419>NP_543151 Length = 1070 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 591 GQVELIRLL 599>NP_001164157 Length = 1066 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 587 GQVELIRLL 595>NP_001164158 Length = 1056 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 577 GQVELIRLL 585>NP_001164159 Length = 1005 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 526 GQVELIRLL 534>XP_005254804 Length = 4796 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TI+L+RIL Sbjct: 2151 TIQLIRIL 2158>XP_006720791 Length = 4853 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TI+L+RIL Sbjct: 2216 TIQLIRIL 2223>XP_005254803 Length = 4854 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TI+L+RIL Sbjct: 2216 TIQLIRIL 2223>XP_005254800 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TI+L+RIL Sbjct: 2216 TIQLIRIL 2223>XP_005254799 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TI+L+RIL Sbjct: 2216 TIQLIRIL 2223>XP_006710438 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 497 GQVELIRLL 505>XP_006710437 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 497 GQVELIRLL 505>XP_006710436 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 511 GQVELIRLL 519>XP_006710435 Length = 1034 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 555 GQVELIRLL 563>XP_006710434 Length = 1103 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 591 GQVELIRLL 599>XP_006710433 Length = 1169 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 690 GQVELIRLL 698>XP_006710432 Length = 1202 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 690 GQVELIRLL 698>XP_006710431 Length = 1205 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 726 GQVELIRLL 734>XP_006710430 Length = 1226 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 747 GQVELIRLL 755>XP_006710429 Length = 1238 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G +EL+R+L Sbjct: 726 GQVELIRLL 734>NP_003913 Length = 4861 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TI+L+RIL Sbjct: 2216 TIQLIRIL 2223>NP_001004746 Length = 359 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G+IELV IL Sbjct: 243 GSIELVTIL 251>NP_001171559 Length = 1259 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 686 GTIVLVRI 693>NP_003889 Length = 1496 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 923 GTIVLVRI 930>NP_001097 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GTIELVR 7 GTIELV+ Sbjct: 68 GTIELVK 74>XP_005267257 Length = 909 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 336 GTIVLVRI 343>XP_005267256 Length = 1113 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 540 GTIVLVRI 547>XP_005267255 Length = 1165 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 592 GTIVLVRI 599>XP_006715655 Length = 1288 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 923 GTIVLVRI 930>XP_005267254 Length = 1443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 870 GTIVLVRI 877>XP_006715654 Length = 1495 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GTIELVRI 8 GTI LVRI Sbjct: 922 GTIVLVRI 929>XP_005265640 Length = 533 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GTIELVR 7 GTIELV+ Sbjct: 89 GTIELVK 95>NP_001186209 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TIE++R+L Sbjct: 225 TIEMLRVL 232>NP_619515 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TIE++R+L Sbjct: 225 TIEMLRVL 232>NP_005320 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TIE++R+L Sbjct: 225 TIEMLRVL 232>XP_005255978 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TIE++R+L Sbjct: 225 TIEMLRVL 232>XP_005255977 Length = 553 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TIELVRIL 9 TIE++R+L Sbjct: 225 TIEMLRVL 232>NP_001004745 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G+IE+V IL Sbjct: 216 GSIEIVTIL 224>NP_001004747 Length = 340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTIELVRIL 9 G+IE+V IL Sbjct: 234 GSIEIVTIL 242>NP_444511 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TIELVRIL 9 T+E VRIL Sbjct: 124 TVEQVRIL 131>NP_004201 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTIELVRIL 9 GTI +RIL Sbjct: 438 GTITQIRIL 446>NP_001092314 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TIELVRI 8 TIE+VR+ Sbjct: 248 TIEMVRV 254>NP_001132986 Length = 571 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TIELVRIL 9 T+E VRIL Sbjct: 124 TVEQVRIL 131>XP_005270327 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTIELVRIL 9 GTI +RIL Sbjct: 363 GTITQIRIL 371>XP_005270326 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTIELVRIL 9 GTI +RIL Sbjct: 421 GTITQIRIL 429Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.333 0.158 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 331,538 Number of extensions: 471 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |