Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 299 NP_079039 18 1482 NP_996897 18 1482 XP_005271269 18 1482 NP_001159395 17 3301 NP_000536 17 3301 NP_000449 17 3301 NP_005057 17 3301 NP_001873 17 3301 XP_005253988 17 3301 XP_005271173 17 3301 XP_005271172 17 3301 XP_005271170 17 3301 XP_005271169 17 3301 XP_005271168 17 3301 NP_510966 17 4312 NP_001775 17 4312 NP_001020331 17 4312 XP_005260229 17 4312 XP_005260228 17 4312 XP_005260227 17 4312 NP_004470 16 5631 NP_001015508 16 5631 NP_005550 16 5631 XP_005273541 16 5631 XP_005273540 16 5631 NP_037489 16 5631 NP_060661 16 7355 NP_008832 16 7355 NP_001129198 16 7355 NP_055309 16 7355 NP_078843 16 7355 XP_006721103 16 7355 XP_005255314 16 7355 XP_006721102 16 7355 XP_005255313 16 7355 XP_005255312 16 7355 XP_006721101 16 7355 XP_005255311 16 7355 XP_005255310 16 7355 XP_005254461 16 7355 XP_006720603 16 7355 XP_006720602 16 7355 XP_005266498 16 7355 XP_006716461 16 7355 XP_005273698 16 7355 XP_005273697 16 7355 XP_005273696 16 7355 XP_005273695 16 7355 XP_005273694 16 7355 XP_005273693 16 7355 XP_005273692 16 7355 XP_006716460 16 7355 XP_006716459 16 7355 NP_002290 15 9605 NP_065801 15 9605 NP_056332 15 9605 NP_945322 15 9605 XP_005274495 15 9605 XP_006718877 15 9605 XP_006718876 15 9605 XP_006715638 15 9605 XP_005267216 15 9605 NP_115521 15 9605>NP_115803 Length = 1156 Score = 20.4 bits (41), Expect = 299 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GTGLNQSR 8 GTGLNQSR Sbjct: 1066 GTGLNQSR 1073>NP_079039 Length = 848 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG NQSRM Sbjct: 82 TGANQSRM 89>NP_996897 Length = 545 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG NQSRM Sbjct: 82 TGANQSRM 89>XP_005271269 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG NQSRM Sbjct: 82 TGANQSRM 89>NP_001159395 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TGLNQS + Sbjct: 143 TGLNQSHL 150>NP_000536 Length = 631 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TGLNQS + Sbjct: 137 TGLNQSHL 144>NP_000449 Length = 557 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TGLNQS + Sbjct: 143 TGLNQSHL 150>NP_005057 Length = 707 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 G GLNQ+R Sbjct: 37 GMGLNQNR 44>NP_001873 Length = 322 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GTGLNQSRM 9 GTGL+ S+M Sbjct: 249 GTGLDPSKM 257>XP_005253988 Length = 662 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TGLNQS + Sbjct: 137 TGLNQSHL 144>XP_005271173 Length = 669 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 G GLNQ+R Sbjct: 37 GMGLNQNR 44>XP_005271172 Length = 669 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 G GLNQ+R Sbjct: 37 GMGLNQNR 44>XP_005271170 Length = 707 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 G GLNQ+R Sbjct: 37 GMGLNQNR 44>XP_005271169 Length = 707 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 G GLNQ+R Sbjct: 37 GMGLNQNR 44>XP_005271168 Length = 707 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 G GLNQ+R Sbjct: 37 GMGLNQNR 44>NP_510966 Length = 835 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG NQ+R Sbjct: 819 GTGHNQTR 826>NP_001775 Length = 742 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG NQ+R Sbjct: 726 GTGHNQTR 733>NP_001020331 Length = 786 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG NQ+R Sbjct: 770 GTGHNQTR 777>XP_005260229 Length = 801 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG NQ+R Sbjct: 785 GTGHNQTR 792>XP_005260228 Length = 845 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG NQ+R Sbjct: 829 GTGHNQTR 836>XP_005260227 Length = 894 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG NQ+R Sbjct: 878 GTGHNQTR 885>NP_004470 Length = 342 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 TGLNQSR 8 TG+N+SR Sbjct: 288 TGMNESR 294>NP_001015508 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTGLNQSRM 9 G+GL++SR+ Sbjct: 22 GSGLSKSRL 30>NP_005550 Length = 3075 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 G GL QSR+ Sbjct: 1327 GQGLQQSRI 1335>XP_005273541 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTGLNQSRM 9 G+GL++SR+ Sbjct: 22 GSGLSKSRL 30>XP_005273540 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTGLNQSRM 9 G+GL++SR+ Sbjct: 22 GSGLSKSRL 30>NP_037489 Length = 347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GTGLNQSRM 9 G+GL++SR+ Sbjct: 22 GSGLSKSRL 30>NP_060661 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 GTG NQS + Sbjct: 55 GTGDNQSTL 63>NP_008832 Length = 2548 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG+ QSR+ Sbjct: 804 TGIRQSRL 811>NP_001129198 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>NP_055309 Length = 1962 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 686 GTGESQSR 693>NP_078843 Length = 420 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_006721103 Length = 1597 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 654 GTGESQSR 661>XP_005255314 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 433 GTGESQSR 440>XP_006721102 Length = 1820 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 544 GTGESQSR 551>XP_005255313 Length = 1822 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 654 GTGESQSR 661>XP_005255312 Length = 1871 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 654 GTGESQSR 661>XP_006721101 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 654 GTGESQSR 661>XP_005255311 Length = 1913 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 686 GTGESQSR 693>XP_005255310 Length = 1919 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GTGLNQSR 8 GTG +QSR Sbjct: 654 GTGESQSR 661>XP_005254461 Length = 2600 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG+ QSR+ Sbjct: 785 TGIRQSRL 792>XP_006720603 Length = 2619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG+ QSR+ Sbjct: 804 TGIRQSRL 811>XP_006720602 Length = 2619 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 TGLNQSRM 9 TG+ QSR+ Sbjct: 804 TGIRQSRL 811>XP_005266498 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 GTG NQS + Sbjct: 55 GTGDNQSTL 63>XP_006716461 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273698 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273697 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273696 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273695 Length = 418 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273694 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273693 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_005273692 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_006716460 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>XP_006716459 Length = 444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 TGLNQSRM 9 TG++QSR+ Sbjct: 195 TGISQSRI 202>NP_002290 Length = 1927 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GLNQSRM 9 GLN+SR+ Sbjct: 1654 GLNKSRL 1660>NP_065801 Length = 1204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GLNQSRM 9 GLN++RM Sbjct: 715 GLNRARM 721>NP_056332 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 GT LN+S + Sbjct: 416 GTSLNESSL 424>NP_945322 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 GT LN+S + Sbjct: 416 GTSLNESSL 424>XP_005274495 Length = 257 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GTGLNQ 6 GTGLN+ Sbjct: 9 GTGLNR 14>XP_006718877 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 GT LN+S + Sbjct: 169 GTSLNESSL 177>XP_006718876 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 GT LN+S + Sbjct: 210 GTSLNESSL 218>XP_006715638 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 G G++ SRM Sbjct: 440 GRGISDSRM 448>XP_005267216 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 G G++ SRM Sbjct: 440 GRGISDSRM 448>NP_115521 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GTGLNQSRM 9 G G++ SRM Sbjct: 440 GRGISDSRM 448Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.310 0.126 0.347 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 592,785 Number of extensions: 889 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |