Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 509 NP_444254 20 509 NP_444253 20 509 NP_444255 20 509 XP_005247551 20 509 XP_005247550 20 509 XP_006713712 20 509 XP_005247549 20 509 NP_065978 17 4312 NP_059344 17 4312 NP_006331 17 4312 NP_059345 17 4312 XP_005257005 17 4312 XP_006721701 17 4312 XP_006721700 17 4312 XP_005257002 17 4312 XP_005257001 17 4312 XP_006721699 17 4312 XP_006721698 17 4312 XP_005257000 17 4312 NP_001138360 17 4312 NP_828848 17 4312 NP_001257545 16 5631 NP_002754 16 5631 XP_006711518 16 5631 XP_005273252 16 5631 XP_005273253 16 5631 XP_005273251 16 5631 NP_001138432 16 5631 NP_038479 16 7355 NP_579899 16 7355 NP_937870 16 7355 NP_937872 16 7355 XP_006717823 16 7355 XP_005269751 16 7355 XP_005269750 16 7355 XP_006713970 16 7355 XP_006713969 16 7355 XP_006713968 16 7355 NP_002917 16 7355 NP_003918 15 9605 NP_001268383 15 9605 NP_001268382 15 9605 XP_006713701 15 9605 XP_005247511 15 9605>NP_444256 Length = 1794 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1026 GTAPAFKQK 1034>NP_444254 Length = 1845 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1026 GTAPAFKQK 1034>NP_444253 Length = 1914 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1095 GTAPAFKQK 1103>NP_444255 Length = 1863 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1095 GTAPAFKQK 1103>XP_005247551 Length = 1855 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1036 GTAPAFKQK 1044>XP_005247550 Length = 1856 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1105 GTAPAFKQK 1113>XP_006713712 Length = 1923 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1105 GTAPAFKQK 1113>XP_005247549 Length = 1924 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GTASAFKQK 9 GTA AFKQK Sbjct: 1105 GTAPAFKQK 1113>NP_065978 Length = 419 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTAS FK + Sbjct: 211 GTASTFKHE 219>NP_059344 Length = 521 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 482 TASGFKQR 489>NP_006331 Length = 520 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 482 TASGFKQR 489>NP_059345 Length = 552 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 482 TASGFKQR 489>XP_005257005 Length = 522 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 483 TASGFKQR 490>XP_006721701 Length = 529 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 477 TASGFKQR 484>XP_006721700 Length = 535 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 483 TASGFKQR 490>XP_005257002 Length = 553 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 515 TASGFKQR 522>XP_005257001 Length = 554 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 515 TASGFKQR 522>XP_006721699 Length = 554 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 516 TASGFKQR 523>XP_006721698 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 516 TASGFKQR 523>XP_005257000 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 515 TASGFKQR 522>NP_001138360 Length = 534 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS FKQ+ Sbjct: 482 TASGFKQR 489>NP_828848 Length = 818 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GTASAFK 7 GTASAF+ Sbjct: 202 GTASAFR 208>NP_001257545 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTASAF K Sbjct: 28 GTASAFFAK 36>NP_002754 Length = 737 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTASAF K Sbjct: 28 GTASAFFAK 36>XP_006711518 Length = 680 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTASAF K Sbjct: 28 GTASAFFAK 36>XP_005273252 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTASAF K Sbjct: 28 GTASAFFAK 36>XP_005273253 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTASAF K Sbjct: 28 GTASAFFAK 36>XP_005273251 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 GTASAF K Sbjct: 28 GTASAFFAK 36>NP_001138432 Length = 544 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ASAFKQK 9 ASAFK+K Sbjct: 501 ASAFKEK 507>NP_038479 Length = 2061 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS F+QK Sbjct: 1937 TASLFEQK 1944>NP_579899 Length = 2048 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS F+QK Sbjct: 1924 TASLFEQK 1931>NP_937870 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 G ASA KQK Sbjct: 461 GKASADKQK 469>NP_937872 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 G ASA KQK Sbjct: 1109 GKASADKQK 1117>XP_006717823 Length = 1938 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS F+QK Sbjct: 1814 TASLFEQK 1821>XP_005269751 Length = 2067 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS F+QK Sbjct: 1943 TASLFEQK 1950>XP_005269750 Length = 2080 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 TASAFKQK 9 TAS F+QK Sbjct: 1956 TASLFEQK 1963>XP_006713970 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 G ASA KQK Sbjct: 308 GKASADKQK 316>XP_006713969 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 G ASA KQK Sbjct: 1109 GKASADKQK 1117>XP_006713968 Length = 1447 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 G ASA KQK Sbjct: 1109 GKASADKQK 1117>NP_002917 Length = 1376 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GTASAFKQK 9 G ASA KQK Sbjct: 1109 GKASADKQK 1117>NP_003918 Length = 411 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TASAFKQ 8 TAS FKQ Sbjct: 248 TASIFKQ 254>NP_001268383 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TASAFKQ 8 TAS FKQ Sbjct: 72 TASIFKQ 78>NP_001268382 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 TASAFKQ 8 TAS FKQ Sbjct: 104 TASIFKQ 110>XP_006713701 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTASAFKQK 9 GT FKQK Sbjct: 321 GTTVHFKQK 329>XP_005247511 Length = 361 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GTASAFKQK 9 GT FKQK Sbjct: 321 GTTVHFKQK 329Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.305 0.113 0.290 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,373 Number of extensions: 578 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |