Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 390 NP_055325 18 1135 NP_149015 18 1135 XP_006715989 18 1135 NP_004542 18 1482 XP_005245103 17 3301 XP_005245102 17 3301 NP_002013 17 3301 NP_000050 17 4312 NP_006222 17 4312 NP_001188478 16 5631 NP_001188476 16 5631 NP_004687 16 5631 NP_001188477 16 5631 NP_001188475 16 5631 XP_005271375 16 5631 XP_006711096 16 5631 XP_005271374 16 5631 XP_006710110 16 5631 NP_000283 16 7355 NP_689585 16 7355 NP_570721 16 7355 NP_001273737 16 7355 NP_660317 16 7355 NP_001182315 16 7355 NP_001182316 16 7355 XP_006724561 16 7355 XP_005274607 16 7355 XP_005274605 16 7355 XP_006724560 16 7355 XP_006724559 16 7355 XP_005257146 16 7355 XP_006714592 16 7355 NP_055935 15 9605 NP_001155018 15 9605 NP_002141 15 9605 NP_001165464 15 9605 NP_001103132 15 9605 NP_060529 15 9605 NP_001239079 15 9605 NP_114130 15 9605 NP_001239077 15 9605 NP_060845 15 9605 XP_005274734 15 9605 XP_005267891 15 9605 XP_005267210 15 9605 XP_006714819 15 9605 NP_055040 15 9605>NP_004295 Length = 1620 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSYIAQLLP 9 G YIAQLLP Sbjct: 359 GRYIAQLLP 367>NP_055325 Length = 4935 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GSYIAQLLP 9 G+YIA++LP Sbjct: 4531 GAYIAKILP 4539>NP_149015 Length = 5142 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GSYIAQLLP 9 G+YIA++LP Sbjct: 4531 GAYIAKILP 4539>XP_006715989 Length = 5148 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GSYIAQLLP 9 G+YIA++LP Sbjct: 4531 GAYIAKILP 4539>NP_004542 Length = 264 Score = 18.1 bits (35), Expect = 1482 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSYIAQLLP 9 G Y+A++LP Sbjct: 62 GEYVAEILP 70>XP_005245103 Length = 495 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SYIAQLLP 9 S+IAQ+LP Sbjct: 178 SFIAQVLP 185>XP_005245102 Length = 508 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SYIAQLLP 9 S+IAQ+LP Sbjct: 191 SFIAQVLP 198>NP_002013 Length = 558 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SYIAQLLP 9 S+IAQ+LP Sbjct: 241 SFIAQVLP 248>NP_000050 Length = 3418 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y AQ++P Sbjct: 3201 GPYTAQIIP 3209>NP_006222 Length = 2286 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 935 GPYLAMILP 943>NP_001188478 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 236 GGYLALILP 244>NP_001188476 Length = 425 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 342 GGYLALILP 350>NP_004687 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 404 GGYLALILP 412>NP_001188477 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 294 GGYLALILP 302>NP_001188475 Length = 439 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 356 GGYLALILP 364>XP_005271375 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 174 GGYLALILP 182>XP_006711096 Length = 377 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 294 GGYLALILP 302>XP_005271374 Length = 487 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A +LP Sbjct: 404 GGYLALILP 412>XP_006710110 Length = 299 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ Q+LP Sbjct: 113 SYLCQVLP 120Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ Q+LP Sbjct: 146 SYLCQVLP 153Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ Q+LP Sbjct: 196 SYLCQVLP 203>NP_000283 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ +LLP Sbjct: 1221 SYLQELLP 1228>NP_689585 Length = 1437 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSYIAQL 7 GSY AQL Sbjct: 1076 GSYTAQL 1082>NP_570721 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SYIAQLLP 9 ++IA+LLP Sbjct: 333 NFIAELLP 340>NP_001273737 Length = 462 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SYIAQLLP 9 ++IA+LLP Sbjct: 333 NFIAELLP 340>NP_660317 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 GS++A LP Sbjct: 130 GSHVAAFLP 138>NP_001182315 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 GS++A LP Sbjct: 130 GSHVAAFLP 138>NP_001182316 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 GS++A LP Sbjct: 130 GSHVAAFLP 138>XP_006724561 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ +LLP Sbjct: 1047 SYLQELLP 1054>XP_005274607 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ +LLP Sbjct: 1193 SYLQELLP 1200>XP_005274605 Length = 1217 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ +LLP Sbjct: 1203 SYLQELLP 1210>XP_006724560 Length = 1225 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ +LLP Sbjct: 1211 SYLQELLP 1218>XP_006724559 Length = 1243 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SYIAQLLP 9 SY+ +LLP Sbjct: 1229 SYLQELLP 1236>XP_005257146 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 GS++A LP Sbjct: 130 GSHVAAFLP 138>XP_006714592 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SYIAQLLP 9 ++IA+LLP Sbjct: 333 NFIAELLP 340>NP_055935 Length = 4169 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 GS+ Q+LP Sbjct: 1437 GSFYQQVLP 1445>NP_001155018 Length = 1015 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GSYIAQLLP 9 G Y+ LLP Sbjct: 911 GQYVEVLLP 919>NP_002141 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SYIAQLLP 9 +YI Q LP Sbjct: 151 NYIGQFLP 158>NP_001165464 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 SYIAQLLP 9 +YI Q LP Sbjct: 112 NYIGQFLP 119>NP_001103132 Length = 4284 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G+Y+ L+P Sbjct: 386 GTYLVMLVP 394>NP_060529 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSYIAQLLP 9 G YI LLP Sbjct: 1002 GLYIQTLLP 1010>NP_001239079 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A ++P Sbjct: 17 GCYVAGIIP 25>NP_114130 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YIAQLLP 9 Y+A LLP Sbjct: 404 YLADLLP 410>NP_001239077 Length = 284 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A ++P Sbjct: 17 GCYVAGIIP 25>NP_060845 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A ++P Sbjct: 17 GCYVAGIIP 25>XP_005274734 Length = 397 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IAQLLP 9 IAQLLP Sbjct: 64 IAQLLP 69>XP_005267891 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GSYIAQLLP 9 G Y+A ++P Sbjct: 17 GCYVAGIIP 25>XP_005267210 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YIAQLLP 9 Y+A LLP Sbjct: 308 YLADLLP 314>XP_006714819 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 YIAQLLP 9 YI Q+LP Sbjct: 245 YITQVLP 251>NP_055040 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 IAQLLP 9 IAQLLP Sbjct: 231 IAQLLP 236Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.143 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 456,280 Number of extensions: 855 Number of successful extensions: 50 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |