Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 299 NP_001784 18 1935 NP_002940 17 2528 NP_003176 17 3301 NP_001406 16 5631 NP_004414 16 7355 NP_004412 16 7355 NP_002327 16 7355 NP_005449 16 7355 NP_001271175 16 7355 NP_056371 16 7355 NP_001271176 16 7355 NP_001271174 16 7355 NP_004413 16 7355 XP_006721532 16 7355 XP_005256559 16 7355 XP_005267576 16 7355 XP_006720175 16 7355 XP_006720174 16 7355 XP_005267573 16 7355 XP_006720173 16 7355 XP_006720172 16 7355 XP_005267571 16 7355 XP_006719141 16 7355 XP_005247229 16 7355 XP_005244790 16 7355 XP_005244789 16 7355 XP_005244788 16 7355 NP_075561 15 9605 NP_006334 15 9605 NP_001838 15 9605 NP_001191675 15 9605 NP_001191674 15 9605 NP_001191673 15 9605 NP_004053 15 9605 NP_001274688 15 9605 NP_378667 15 9605 NP_001274687 15 9605 NP_001274689 15 9605 NP_001182719 15 9605 XP_005261644 15 9605 XP_006724681 15 9605 XP_006724680 15 9605 XP_005255827 15 9605 XP_005255826 15 9605 XP_005255825 15 9605 XP_005248410 15 9605 XP_006714553 15 9605 XP_005248407 15 9605 XP_005248406 15 9605 XP_005248404 15 9605 XP_005248403 15 9605 XP_006714552 15 9605 XP_005248402 15 9605 XP_005263625 15 9605 XP_005263622 15 9605>NP_004351 Length = 882 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GSVMKGALP 9 GSVM+GALP Sbjct: 269 GSVMEGALP 277>NP_001784 Length = 829 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++G LP Sbjct: 222 GSVLEGVLP 230>NP_002940 Length = 198 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 G VM GA+P Sbjct: 101 GGVMSGAVP 109>NP_003176 Length = 1085 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 G M+GALP Sbjct: 376 GPTMQGALP 384>NP_001406 Length = 472 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GSVMKGAL 8 GS++KG L Sbjct: 281 GSILKGVL 288>NP_004414 Length = 716 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 279 GSIMKG 284>NP_004412 Length = 670 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 281 GSIMKG 286>NP_002327 Length = 1613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVMKGALP 9 +V+KG+LP Sbjct: 218 AVVKGSLP 225>NP_005449 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS+ +G LP Sbjct: 71 GSIGRGVLP 79>NP_001271175 Length = 1782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>NP_056371 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>NP_001271176 Length = 1803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>NP_001271174 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>NP_004413 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 297 GSIMKG 302>XP_006721532 Length = 523 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 297 GSIMKG 302>XP_005256559 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 293 GSIMKG 298>XP_005267576 Length = 1782 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_006720175 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_006720174 Length = 1803 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_005267573 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_006720173 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_006720172 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_005267571 Length = 1804 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSVMKGALP 9 GSV++ A+P Sbjct: 549 GSVLEDAIP 557>XP_006719141 Length = 1613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SVMKGALP 9 +V+KG+LP Sbjct: 218 AVVKGSLP 225>XP_005247229 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 279 GSIMKG 284>XP_005244790 Length = 549 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 281 GSIMKG 286>XP_005244789 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 281 GSIMKG 286>XP_005244788 Length = 695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSVMKG 6 GS+MKG Sbjct: 281 GSIMKG 286>NP_075561 Length = 3197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>NP_006334 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSVMKGAL 8 GSVM+G L Sbjct: 599 GSVMEGNL 606>NP_001838 Length = 1691 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 855 GSIVKKGLP 863>NP_001191675 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 301 GSVTLGVLP 309>NP_001191674 Length = 790 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 398 GSVTLGVLP 406>NP_001191673 Length = 807 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 398 GSVTLGVLP 406>NP_004053 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 398 GSVTLGVLP 406>NP_001274688 Length = 1666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 854 GSIVKKGLP 862>NP_378667 Length = 1690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 854 GSIVKKGLP 862>NP_001274687 Length = 1707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 871 GSIVKKGLP 879>NP_001274689 Length = 1633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 854 GSIVKKGLP 862>NP_001182719 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSVMKGAL 8 GSV KG+L Sbjct: 434 GSVNKGSL 441>XP_005261644 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMKGALP 9 ++KGALP Sbjct: 35 LIKGALP 41>XP_006724681 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 855 GSIVKKGLP 863>XP_006724680 Length = 1708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GSVMKGALP 9 GS++K LP Sbjct: 872 GSIVKKGLP 880>XP_005255827 Length = 651 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 220 GSVTLGVLP 228>XP_005255826 Length = 766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 398 GSVTLGVLP 406>XP_005255825 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSVMKGALP 9 GSV G LP Sbjct: 398 GSVTLGVLP 406>XP_005248410 Length = 2132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 108 MKGSLP 113>XP_006714553 Length = 2792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>XP_005248407 Length = 3208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1184 MKGSLP 1189>XP_005248406 Length = 3214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>XP_005248404 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>XP_005248403 Length = 3250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>XP_006714552 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>XP_005248402 Length = 3251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MKGALP 9 MKG+LP Sbjct: 1227 MKGSLP 1232>XP_005263625 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSVMKGAL 8 GSVM+G L Sbjct: 599 GSVMEGNL 606>XP_005263622 Length = 832 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSVMKGAL 8 GSVM+G L Sbjct: 599 GSVMEGNL 606Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 469,583 Number of extensions: 1085 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |