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Blast-Search of mutated query peptide against human proteome

BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_002430                                                              19     869
NP_000159                                                              17    4312
NP_663616                                                              17    4312
NP_663617                                                              17    4312
NP_663615                                                              17    4312
XP_006724388                                                           17    4312
XP_006724387                                                           17    4312
XP_006724386                                                           17    4312
XP_006724385                                                           17    4312
XP_005249761                                                           17    4312
XP_005249760                                                           17    4312
XP_006711533                                                           16    7355
XP_005245422                                                           16    7355
NP_065821                                                              16    7355
NP_001137307                                                           15    9605
NP_006156                                                              15    9605
XP_005271626                                                           15    9605
XP_005271625                                                           15    9605
XP_005271624                                                           15    9605
XP_005271623                                                           15    9605
XP_005271622                                                           15    9605

>NP_002430
          Length = 1137

 Score = 18.9 bits (37), Expect =   869
 Identities = 8/8 (100%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           GSTKAVSR
Sbjct: 772 GSTKAVSR 779



>NP_000159
          Length = 1580

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   GSTKAVSRL 9
           G TKA SRL
Sbjct: 552 GCTKAYSRL 560



>NP_663616
          Length = 202

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 128 GTTRAVSR 135



>NP_663617
          Length = 202

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 128 GTTRAVSR 135



>NP_663615
          Length = 402

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 328 GTTRAVSR 335



>XP_006724388
          Length = 331

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 257 GTTRAVSR 264



>XP_006724387
          Length = 331

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 257 GTTRAVSR 264



>XP_006724386
          Length = 331

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 257 GTTRAVSR 264



>XP_006724385
          Length = 331

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 8/8 (100%)

Query: 1   GSTKAVSR 8
           G+T+AVSR
Sbjct: 257 GTTRAVSR 264



>XP_005249761
          Length = 1580

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   GSTKAVSRL 9
           G TKA SRL
Sbjct: 552 GCTKAYSRL 560



>XP_005249760
          Length = 1580

 Score = 16.5 bits (31), Expect =  4312
 Identities = 7/9 (77%), Positives = 7/9 (77%)

Query: 1   GSTKAVSRL 9
           G TKA SRL
Sbjct: 552 GCTKAYSRL 560



>XP_006711533
          Length = 747

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSTKAVS 7
           GSTKAV+
Sbjct: 353 GSTKAVA 359



>XP_005245422
          Length = 1203

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSTKAVS 7
           GSTKAV+
Sbjct: 353 GSTKAVA 359



>NP_065821
          Length = 1203

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   GSTKAVS 7
           GSTKAV+
Sbjct: 353 GSTKAVA 359



>NP_001137307
          Length = 1299

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1276 GSSKAVS 1282



>NP_006156
          Length = 1324

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1301 GSSKAVS 1307



>XP_005271626
          Length = 1294

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1271 GSSKAVS 1277



>XP_005271625
          Length = 1311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1288 GSSKAVS 1294



>XP_005271624
          Length = 1311

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1288 GSSKAVS 1294



>XP_005271623
          Length = 1371

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1348 GSSKAVS 1354



>XP_005271622
          Length = 1383

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1    GSTKAVS 7
            GS+KAVS
Sbjct: 1360 GSSKAVS 1366



  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.305    0.116    0.279 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 281,350
Number of extensions: 315
Number of successful extensions: 21
Number of sequences better than 10000.0: 21
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 21
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.4 bits)
S2: 28 (15.4 bits)