Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 19 665 NP_001075109 19 665 NP_149111 17 2528 NP_001258011 17 2528 XP_006725072 17 2528 XP_006725071 17 2528 XP_006725070 17 2528 XP_005248440 17 2528 XP_006714568 17 2528 XP_005248439 17 2528 NP_001120727 17 4312 NP_631915 17 4312 XP_006726254 17 4312 XP_006726253 17 4312 XP_006726252 17 4312 XP_006726214 17 4312 XP_006726213 17 4312 XP_006726212 17 4312 XP_006726371 17 4312 XP_006726370 17 4312 XP_006726116 17 4312 XP_006726115 17 4312 XP_006726114 17 4312 XP_006726017 17 4312 XP_006726016 17 4312 XP_006726015 17 4312 XP_006725929 17 4312 XP_006725928 17 4312 XP_006725927 17 4312 XP_006725828 17 4312 XP_006725827 17 4312 XP_006725826 17 4312 XP_006725701 17 4312 XP_006725700 17 4312 XP_006725699 17 4312 XP_006726334 17 4312 XP_006726333 17 4312 XP_006726332 17 4312 XP_006723139 17 4312 XP_006723138 17 4312 XP_006723137 17 4312 NP_002763 16 5631 NP_149110 16 5631 XP_005256268 16 5631>NP_008835 Length = 4128 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 G SKLLRMK Sbjct: 3647 GGSKLLRMK 3655>NP_001075109 Length = 4097 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 G SKLLRMK Sbjct: 3647 GGSKLLRMK 3655>NP_149111 Length = 451 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>NP_001258011 Length = 311 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>XP_006725072 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>XP_006725071 Length = 440 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>XP_006725070 Length = 500 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>XP_005248440 Length = 360 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>XP_006714568 Length = 440 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>XP_005248439 Length = 500 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GSSK LR+K Sbjct: 164 GSSKTLRVK 172>NP_001120727 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>NP_631915 Length = 1009 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 960 GSLKILRLK 968>XP_006726254 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726253 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726252 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006726214 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726213 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726212 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006726371 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726370 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726116 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726115 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726114 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006726017 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726016 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726015 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006725929 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006725928 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006725927 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006725828 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006725827 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006725826 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006725701 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006725700 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006725699 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006726334 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726333 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006726332 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>XP_006723139 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006723138 Length = 1037 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 988 GSLKILRLK 996>XP_006723137 Length = 1064 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSSKLLRMK 9 GS K+LR+K Sbjct: 1015 GSLKILRLK 1023>NP_002763 Length = 1019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSSKLLR 7 GSSK+LR Sbjct: 287 GSSKILR 293>NP_149110 Length = 470 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSKLLRMK 9 SSK+LR+K Sbjct: 177 SSKMLRVK 184>XP_005256268 Length = 366 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SSKLLRMK 9 SSK+LR+K Sbjct: 73 SSKMLRVK 80Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.127 0.313 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 369,174 Number of extensions: 499 Number of successful extensions: 44 Number of sequences better than 10000.0: 44 Number of HSP's gapped: 44 Number of HSP's successfully gapped: 44 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |