Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_055628                                                              17    3301
XP_006711136                                                           17    3301
XP_006711135                                                           17    3301
NP_001092874                                                           17    4312
NP_001092875                                                           17    4312
NP_001153632                                                           17    4312
NP_001153633                                                           17    4312
NP_932173                                                              17    4312
NP_000326                                                              17    4312
NP_064504                                                              17    4312
NP_001077081                                                           17    4312
NP_005843                                                              17    4312
NP_078901                                                              17    4312
NP_001013641                                                           17    4312
NP_001005273                                                           17    4312
XP_006721493                                                           17    4312
XP_006721491                                                           17    4312
XP_005256486                                                           17    4312
XP_005250558                                                           17    4312
XP_006713346                                                           17    4312
XP_006713345                                                           17    4312
NP_001005271                                                           17    4312
NP_001278417                                                           16    5631
NP_001278418                                                           16    5631
NP_689567                                                              16    5631
NP_001278419                                                           16    5631
NP_001278420                                                           16    5631
NP_003808                                                              16    5631
XP_006723201                                                           16    5631
XP_005273730                                                           16    5631
XP_005273729                                                           16    5631
XP_005273728                                                           16    5631
XP_005273727                                                           16    5631
XP_005273726                                                           16    5631
XP_005273725                                                           16    5631
NP_115648                                                              16    5631
NP_663306                                                              16    7355
NP_003179                                                              16    7355
NP_663304                                                              16    7355
NP_663305                                                              16    7355
NP_000361                                                              16    7355
NP_009016                                                              16    7355
NP_001034663                                                           16    7355
NP_002109                                                              16    7355
XP_006726694                                                           16    7355
XP_006716531                                                           16    7355
XP_006715616                                                           16    7355
NP_778227                                                              16    7355
NP_001269435                                                           15    9605
NP_055845                                                              15    9605
NP_001177087                                                           15    9605
NP_659461                                                              15    9605
NP_001092753                                                           15    9605
NP_001092752                                                           15    9605
NP_001170937                                                           15    9605
NP_005482                                                              15    9605
XP_005276925                                                           15    9605
XP_005274693                                                           15    9605
XP_006724866                                                           15    9605
XP_006724865                                                           15    9605
XP_005256690                                                           15    9605
XP_005256689                                                           15    9605
XP_005255898                                                           15    9605
XP_005271889                                                           15    9605
XP_006718066                                                           15    9605
XP_005271888                                                           15    9605
XP_006718065                                                           15    9605
XP_005271886                                                           15    9605
XP_005271885                                                           15    9605
XP_006718064                                                           15    9605
XP_005248150                                                           15    9605
XP_005248148                                                           15    9605
XP_005248147                                                           15    9605
XP_005248146                                                           15    9605
XP_005248145                                                           15    9605
XP_005248144                                                           15    9605
XP_005248143                                                           15    9605
XP_005248142                                                           15    9605
XP_005248141                                                           15    9605
XP_005248140                                                           15    9605
XP_005248139                                                           15    9605
NP_001137157                                                           15    9605
NP_001121548                                                           15    9605
NP_005665                                                              15    9605
NP_001092754                                                           15    9605
>NP_055628
          Length = 1065

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYSQ
Sbjct: 587 GSNYSQ 592
>XP_006711136
          Length = 553

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  GSNYSQ 6
          GSNYSQ
Sbjct: 75 GSNYSQ 80
>XP_006711135
          Length = 553

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  GSNYSQ 6
          GSNYSQ
Sbjct: 75 GSNYSQ 80
>NP_001092874
          Length = 2016

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1992 GSDYSHSE 1999
>NP_001092875
          Length = 1998

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1974 GSDYSHSE 1981
>NP_001153632
          Length = 1983

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1959 GSDYSHSE 1966
>NP_001153633
          Length = 1962

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1938 GSDYSHSE 1945
>NP_932173
          Length = 2016

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1992 GSDYSHSE 1999
>NP_000326
          Length = 2015

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1991 GSDYSHSE 1998
>NP_064504
          Length = 902

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   NYSQSE 8
           NYSQSE
Sbjct: 97  NYSQSE 102
>NP_001077081
          Length = 220

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  NYSQSEA 9
          NY QSEA
Sbjct: 5  NYQQSEA 11
>NP_005843
          Length = 1966

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSNYSQSEA 9
            G+NYSQ  A
Sbjct: 1913 GANYSQMPA 1921
>NP_078901
          Length = 699

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   NYSQSE 8
           NYSQSE
Sbjct: 97  NYSQSE 102
>NP_001013641
          Length = 373

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 3  NYSQSEA 9
          NY QSEA
Sbjct: 5  NYQQSEA 11
>NP_001005273
          Length = 2000

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSNYSQSEA 9
            G+NYSQ  A
Sbjct: 1947 GANYSQMPA 1955
>XP_006721493
          Length = 2056

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSNYSQSEA 9
            G+NYSQ  A
Sbjct: 2003 GANYSQMPA 2011
>XP_006721491
          Length = 2025

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSNYSQSEA 9
            G+NYSQ  A
Sbjct: 1972 GANYSQMPA 1980
>XP_005256486
          Length = 2060

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSNYSQSEA 9
            G+NYSQ  A
Sbjct: 2007 GANYSQMPA 2015
>XP_005250558
          Length = 1024

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   NYSQSE 8
           NYSQSE
Sbjct: 97  NYSQSE 102
>XP_006713346
          Length = 2016

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1992 GSDYSHSE 1999
>XP_006713345
          Length = 2016

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GSNYSQSE 8
            GS+YS SE
Sbjct: 1992 GSDYSHSE 1999
>NP_001005271
          Length = 2059

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GSNYSQSEA 9
            G+NYSQ  A
Sbjct: 2006 GANYSQMPA 2014
>NP_001278417
          Length = 597

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSNYSQSE 8
           G N+SQS+
Sbjct: 273 GKNFSQSQ 280
>NP_001278418
          Length = 590

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSNYSQSE 8
           G N+SQS+
Sbjct: 266 GKNFSQSQ 273
>NP_689567
          Length = 590

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSNYSQSE 8
           G N+SQS+
Sbjct: 266 GKNFSQSQ 273
>NP_001278419
          Length = 435

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSNYSQSE 8
           G N+SQS+
Sbjct: 111 GKNFSQSQ 118
>NP_001278420
          Length = 435

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSNYSQSE 8
           G N+SQS+
Sbjct: 111 GKNFSQSQ 118
>NP_003808
          Length = 754

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>XP_006723201
          Length = 554

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GSNYSQSE 8
           G N+SQS+
Sbjct: 230 GKNFSQSQ 237
>XP_005273730
          Length = 749

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>XP_005273729
          Length = 757

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>XP_005273728
          Length = 762

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>XP_005273727
          Length = 776

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>XP_005273726
          Length = 783

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>XP_005273725
          Length = 784

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          GSNYS++
Sbjct: 82 GSNYSET 88
>NP_115648
          Length = 256

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSNYSQSEA 9
           GS Y+ SEA
Sbjct: 208 GSTYTPSEA 216
>NP_663306
          Length = 491

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYS+
Sbjct: 203 GSNYSE 208
>NP_003179
          Length = 579

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYS+
Sbjct: 203 GSNYSE 208
>NP_663304
          Length = 606

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYS+
Sbjct: 203 GSNYSE 208
>NP_663305
          Length = 518

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYS+
Sbjct: 203 GSNYSE 208
>NP_000361
          Length = 278

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G+NY QS
Sbjct: 226 GNNYKQS 232
>NP_009016
          Length = 308

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYS+
Sbjct: 142 GSNYSE 147
>NP_001034663
          Length = 626

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2   SNYSQSE 8
           SNY+Q+E
Sbjct: 615 SNYAQAE 621
>NP_002109
          Length = 263

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1   GSNYSQ 6
           GSNYS+
Sbjct: 253 GSNYSE 258
>XP_006726694
          Length = 178

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 1  GSNYSQS 7
          G+NYS+S
Sbjct: 18 GTNYSRS 24
>XP_006716531
          Length = 162

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G+NY QS
Sbjct: 110 GNNYKQS 116
>XP_006715616
          Length = 476

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 1  GSNYSQ 6
          GSNYS+
Sbjct: 73 GSNYSE 78
>NP_778227
          Length = 348

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2  SNYSQSEA 9
          +N+SQ+EA
Sbjct: 3  NNFSQAEA 10
>NP_001269435
          Length = 709

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SNYSQSEA 9
           S+YS SEA
Sbjct: 572 SSYSPSEA 579
>NP_055845
          Length = 3013

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 2967 GSNLDMSEA 2975
>NP_001177087
          Length = 604

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSNYSQSEA 9
           G+N S SEA
Sbjct: 308 GNNASDSEA 316
>NP_659461
          Length = 525

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSNYSQSEA 9
           G+N S SEA
Sbjct: 279 GNNASDSEA 287
>NP_001092753
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>NP_001092752
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>NP_001170937
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SNYSQSEA 9
           S+YS SEA
Sbjct: 704 SSYSTSEA 711
>NP_005482
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SNYSQSEA 9
           S+YS SEA
Sbjct: 729 SSYSTSEA 736
>XP_005276925
          Length = 336

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GSNYSQSEA 9
          G+N S SEA
Sbjct: 40 GNNASDSEA 48
>XP_005274693
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SNYSQSEA 9
           S+YS SEA
Sbjct: 704 SSYSTSEA 711
>XP_006724866
          Length = 749

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SNYSQSEA 9
           S+YS SEA
Sbjct: 704 SSYSTSEA 711
>XP_006724865
          Length = 774

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   SNYSQSEA 9
           S+YS SEA
Sbjct: 729 SSYSTSEA 736
>XP_005256690
          Length = 237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GSNYSQ 6
           G NYSQ
Sbjct: 185 GKNYSQ 190
>XP_005256689
          Length = 237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GSNYSQ 6
           G NYSQ
Sbjct: 185 GKNYSQ 190
>XP_005255898
          Length = 336

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GSNYSQSEA 9
          G+N S SEA
Sbjct: 40 GNNASDSEA 48
>XP_005271889
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>XP_006718066
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>XP_005271888
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>XP_006718065
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>XP_005271886
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>XP_005271885
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>XP_006718064
          Length = 500

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 255 GKNFSQS 261
>XP_005248150
          Length = 2044

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 1998 GSNLDMSEA 2006
>XP_005248148
          Length = 3028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 2982 GSNLDMSEA 2990
>XP_005248147
          Length = 3028

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 2982 GSNLDMSEA 2990
>XP_005248146
          Length = 3073

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3027 GSNLDMSEA 3035
>XP_005248145
          Length = 3079

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3033 GSNLDMSEA 3041
>XP_005248144
          Length = 3099

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3053 GSNLDMSEA 3061
>XP_005248143
          Length = 3105

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3059 GSNLDMSEA 3067
>XP_005248142
          Length = 3114

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3068 GSNLDMSEA 3076
>XP_005248141
          Length = 3119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3073 GSNLDMSEA 3081
>XP_005248140
          Length = 3119

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3073 GSNLDMSEA 3081
>XP_005248139
          Length = 3120

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 6/9 (66%)

Query: 1    GSNYSQSEA 9
            GSN   SEA
Sbjct: 3074 GSNLDMSEA 3082
>NP_001137157
          Length = 575

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   GSNYSQSEA 9
           G+N S SEA
Sbjct: 279 GNNASDSEA 287
>NP_001121548
          Length = 237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GSNYSQ 6
           G NYSQ
Sbjct: 185 GKNYSQ 190
>NP_005665
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
>NP_001092754
          Length = 458

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GSNYSQS 7
           G N+SQS
Sbjct: 213 GKNFSQS 219
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.279   0.0986    0.238 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 526,389
Number of extensions: 874
Number of successful extensions: 85
Number of sequences better than 10000.0: 85
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 85
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 18 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (14.6 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package