Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004831 17 3301 XP_006724854 17 3301 XP_005262556 17 3301 NP_060420 17 4312 NP_001230271 17 4312 NP_620137 17 4312 NP_001139504 17 4312 XP_005257549 17 4312 NP_001243197 16 5631 NP_001243196 16 5631 NP_115967 16 5631 NP_001257941 16 5631 XP_006718107 16 5631 XP_006718106 16 5631 NP_001009899 16 7355 NP_660337 16 7355 NP_060733 16 7355 NP_000698 16 7355 XP_006720926 16 7355 XP_006720925 16 7355 XP_006720924 16 7355 XP_006720923 16 7355 XP_005255218 16 7355 XP_005255217 16 7355 XP_005247266 16 7355 XP_005247265 16 7355 XP_006713065 16 7355 XP_005264953 16 7355 XP_006713064 16 7355 XP_006713063 16 7355 XP_006713062 16 7355 XP_006713061 16 7355 XP_006713060 16 7355 XP_006713059 16 7355 XP_006713058 16 7355 XP_006713057 16 7355 XP_006712103 16 7355 XP_006712102 16 7355 NP_955379 16 7355 NP_115495 15 9605 NP_620126 15 9605>NP_004831 Length = 776 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SLSAANTT 9 SLSAANT+ Sbjct: 124 SLSAANTS 131>XP_006724854 Length = 695 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SLSAANTT 9 SLSAANT+ Sbjct: 43 SLSAANTS 50>XP_005262556 Length = 727 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 2 SLSAANTT 9 SLSAANT+ Sbjct: 124 SLSAANTS 131>NP_060420 Length = 1142 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 G +SAA+TT Sbjct: 105 GQISAADTT 113>NP_001230271 Length = 1030 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 G +SAA+TT Sbjct: 105 GQISAADTT 113>NP_620137 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SLSAANT 8 SLSAANT Sbjct: 517 SLSAANT 523>NP_001139504 Length = 777 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 SLSAANT 8 SLSAANT Sbjct: 484 SLSAANT 490>XP_005257549 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 G +SAA+TT Sbjct: 105 GQISAADTT 113>NP_001243197 Length = 1026 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 GSL +AN+T Sbjct: 248 GSLHSANST 256>NP_001243196 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 GSL +AN+T Sbjct: 542 GSLHSANST 550>NP_115967 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 GSL +AN+T Sbjct: 542 GSLHSANST 550>NP_001257941 Length = 259 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GSLSAANTT 9 GSL A NTT Sbjct: 4 GSLLAYNTT 12>XP_006718107 Length = 1330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 GSL +AN+T Sbjct: 552 GSLHSANST 560>XP_006718106 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 GSL +AN+T Sbjct: 560 GSLHSANST 568>NP_001009899 Length = 2245 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLSAANTT 9 SLSA+N+T Sbjct: 642 SLSASNST 649>NP_660337 Length = 1748 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>NP_060733 Length = 1435 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSLSAANTT 9 G+L A NTT Sbjct: 991 GALIATNTT 999>NP_000698 Length = 424 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSLSAANTT 9 G+LSA N T Sbjct: 15 GTLSAPNAT 23Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GSLSAANTT 9 GSLS+ +TT Sbjct: 370 GSLSSRHTT 378>XP_006720926 Length = 1383 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>XP_006720925 Length = 1674 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>XP_006720924 Length = 1679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>XP_006720923 Length = 1738 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>XP_005255218 Length = 1750 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>XP_005255217 Length = 1751 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GS+SAAN Sbjct: 47 GSVSAAN 53>XP_005247266 Length = 2189 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLSAANTT 9 SLSA+N+T Sbjct: 586 SLSASNST 593>XP_005247265 Length = 2211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLSAANTT 9 SLSA+N+T Sbjct: 608 SLSASNST 615>XP_006713065 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_005264953 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713064 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713063 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713062 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713061 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713060 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713059 Length = 1172 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713058 Length = 1172 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006713057 Length = 1172 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>XP_006712103 Length = 1175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSLSAANTT 9 G+L A NTT Sbjct: 731 GALIATNTT 739>XP_006712102 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSLSAANTT 9 G+L A NTT Sbjct: 869 GALIATNTT 877>NP_955379 Length = 712 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLSAAN 7 GSLS+AN Sbjct: 355 GSLSSAN 361>NP_115495 Length = 6306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GSLSAANTT 9 GSL A N T Sbjct: 2853 GSLGAINVT 2861>NP_620126 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 SAANTT 9 SAANTT Sbjct: 112 SAANTT 117Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.287 0.0989 0.235 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 321,994 Number of extensions: 468 Number of successful extensions: 42 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |