Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 509 NP_001074003 17 3301 XP_005254452 17 3301 XP_005254451 17 3301 NP_001129663 17 4312 NP_056308 17 4312 NP_001092108 17 4312 NP_031399 16 5631 NP_001255968 16 5631 XP_005255623 16 5631 NP_076936 16 5631 NP_008835 16 7355 NP_001012270 16 7355 NP_001075109 16 7355 NP_004769 16 7355 NP_001271308 16 7355 NP_001271306 16 7355 NP_065939 16 7355 NP_001185901 16 7355 XP_005254569 16 7355 XP_006710855 16 7355 XP_006710854 16 7355 NP_000929 16 7355 NP_000114 15 9605 NP_057723 15 9605 NP_000693 15 9605 NP_036270 15 9605 NP_001539 15 9605 NP_001257856 15 9605 NP_001257859 15 9605 NP_001257857 15 9605 NP_001257858 15 9605 NP_659444 15 9605 NP_036399 15 9605 NP_001271236 15 9605 NP_001271235 15 9605 NP_115548 15 9605 NP_071918 15 9605 NP_001191354 15 9605 NP_055646 15 9605 XP_005258760 15 9605 XP_005258758 15 9605 XP_005258757 15 9605 XP_005258690 15 9605 XP_005258689 15 9605 XP_005254649 15 9605 XP_005254648 15 9605 XP_005249939 15 9605 XP_006715854 15 9605 XP_006715853 15 9605 XP_006713495 15 9605 XP_006713156 15 9605 XP_006713155 15 9605 XP_006710884 15 9605 NP_001123578 15 9605 NP_997228 15 9605>NP_004295 Length = 1620 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GSLRKLRRA 9 GS+RKLRRA Sbjct: 130 GSVRKLRRA 138>NP_001074003 Length = 2214 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GSLRKLRR 8 G+LRKLR+ Sbjct: 179 GALRKLRK 186>XP_005254452 Length = 2188 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GSLRKLRR 8 G+LRKLR+ Sbjct: 179 GALRKLRK 186>XP_005254451 Length = 2214 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GSLRKLRR 8 G+LRKLR+ Sbjct: 179 GALRKLRK 186>NP_001129663 Length = 851 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GSLRKLRR 8 G+LRKLR+ Sbjct: 194 GALRKLRQ 201>NP_056308 Length = 859 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GSLRKLRR 8 G+LRKLR+ Sbjct: 194 GALRKLRQ 201>NP_001092108 Length = 708 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GSLRKLRR 8 GSL+KLR+ Sbjct: 635 GSLKKLRQ 642>NP_031399 Length = 582 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLRKLR 7 G+LRKLR Sbjct: 445 GNLRKLR 451>NP_001255968 Length = 536 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GSLRKLR 7 G+LRKLR Sbjct: 399 GNLRKLR 405>XP_005255623 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S RKLRRA Sbjct: 513 SSRKLRRA 520>NP_076936 Length = 585 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S RKLRRA Sbjct: 513 SSRKLRRA 520>NP_008835 Length = 4128 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSL +LRR Sbjct: 1705 GSLEELRR 1712>NP_001012270 Length = 137 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRKLRR 8 +LRKLRR Sbjct: 84 NLRKLRR 90>NP_001075109 Length = 4097 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSL +LRR Sbjct: 1705 GSLEELRR 1712>NP_004769 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LRKLRRA 9 LRKLRR+ Sbjct: 312 LRKLRRS 318>NP_001271308 Length = 146 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLRKLRRA 9 SLRKL++A Sbjct: 131 SLRKLKQA 138>NP_001271306 Length = 140 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLRKLRRA 9 SLRKL++A Sbjct: 125 SLRKLKQA 132>NP_065939 Length = 1094 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRKLRR 8 SLRKL+R Sbjct: 490 SLRKLKR 496>NP_001185901 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRKLRR 8 SLRKL+R Sbjct: 431 SLRKLKR 437>XP_005254569 Length = 167 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 SLRKLRRA 9 SLRKL++A Sbjct: 152 SLRKLKQA 159>XP_006710855 Length = 821 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRKLRR 8 SLRKL+R Sbjct: 217 SLRKLKR 223>XP_006710854 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRKLRR 8 SLRKL+R Sbjct: 442 SLRKLKR 448>NP_000929 Length = 1174 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SLRKLRR 8 +LRKLRR Sbjct: 586 TLRKLRR 592>NP_000114 Length = 1186 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKLRRA 9 RKLRRA Sbjct: 1174 RKLRRA 1179>NP_057723 Length = 129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLR+L R Sbjct: 4 GSLRRLLR 11>NP_000693 Length = 1020 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSLRKLR 7 GS+RK+R Sbjct: 463 GSVRKMR 469>NP_036270 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSLRKLRRA 9 GS+RKL A Sbjct: 54 GSIRKLASA 62>NP_001539 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRKLRR 8 LRKLRR Sbjct: 427 LRKLRR 432>NP_001257856 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRKLRR 8 LRKLRR Sbjct: 427 LRKLRR 432>NP_001257859 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRKLRR 8 LRKLRR Sbjct: 396 LRKLRR 401>NP_001257857 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRKLRR 8 LRKLRR Sbjct: 396 LRKLRR 401>NP_001257858 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 LRKLRR 8 LRKLRR Sbjct: 396 LRKLRR 401>NP_659444 Length = 1033 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GSLRKL 6 GSLRKL Sbjct: 746 GSLRKL 751>NP_036399 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 G+LRKL R Sbjct: 187 GALRKLLR 194>NP_001271236 Length = 1111 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S+RK RRA Sbjct: 241 SIRKKRRA 248>NP_001271235 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S+RK RRA Sbjct: 198 SIRKKRRA 205>NP_115548 Length = 1316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLRK+ R Sbjct: 943 GSLRKVDR 950>NP_071918 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S+RK RRA Sbjct: 1013 SIRKKRRA 1020>NP_001191354 Length = 1640 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKLRRA 9 RKLRRA Sbjct: 1628 RKLRRA 1633>NP_055646 Length = 2925 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKLRRA 9 RKLRRA Sbjct: 2677 RKLRRA 2682>XP_005258760 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 G+LRKL R Sbjct: 233 GALRKLLR 240>XP_005258758 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 G+LRKL R Sbjct: 187 GALRKLLR 194>XP_005258757 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 G+LRKL R Sbjct: 187 GALRKLLR 194>XP_005258690 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GSLRKL 6 GSLRKL Sbjct: 229 GSLRKL 234>XP_005258689 Length = 934 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GSLRKL 6 GSLRKL Sbjct: 647 GSLRKL 652>XP_005254649 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S+RK RRA Sbjct: 1036 SIRKKRRA 1043>XP_005254648 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SLRKLRRA 9 S+RK RRA Sbjct: 1036 SIRKKRRA 1043>XP_005249939 Length = 1324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLRK+ R Sbjct: 943 GSLRKVDR 950>XP_006715854 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLRK+ R Sbjct: 943 GSLRKVDR 950>XP_006715853 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLRK+ R Sbjct: 943 GSLRKVDR 950>XP_006713495 Length = 2969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 RKLRRA 9 RKLRRA Sbjct: 2721 RKLRRA 2726>XP_006713156 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLR +RR Sbjct: 444 GSLRVVRR 451>XP_006713155 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 GSLR +RR Sbjct: 444 GSLRVVRR 451>XP_006710884 Length = 100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GSLRKL 6 GSLRKL Sbjct: 81 GSLRKL 86>NP_001123578 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSLRKLRR 8 G+LRKL R Sbjct: 187 GALRKLLR 194>NP_997228 Length = 241 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSLRKLR 7 GSLRK++ Sbjct: 162 GSLRKIK 168Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.140 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,288 Number of extensions: 1028 Number of successful extensions: 56 Number of sequences better than 10000.0: 56 Number of HSP's gapped: 56 Number of HSP's successfully gapped: 56 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |