Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243407 17 2528 NP_997198 17 2528 NP_001243406 17 2528 NP_037423 17 3301 XP_006716613 17 3301 XP_006716612 17 3301 XP_006716611 17 3301 NP_002735 17 4312 XP_006710829 17 4312 XP_006710828 17 4312 NP_065073 16 5631 XP_006715582 16 5631 NP_001275927 16 7355 NP_001275928 16 7355 NP_057657 16 7355 NP_751908 16 7355 NP_751907 16 7355 NP_001123885 16 7355 NP_443100 16 7355 NP_001193594 16 7355 NP_001254650 16 7355 NP_653204 16 7355 XP_005259984 16 7355 XP_005255156 16 7355 XP_006711694 16 7355 XP_005245671 16 7355 NP_079094 16 7355 NP_689991 15 9605 NP_001026851 15 9605 NP_060444 15 9605 NP_110430 15 9605 NP_942593 15 9605 NP_001177195 15 9605 NP_001177196 15 9605 NP_001278253 15 9605 NP_001677 15 9605 NP_056022 15 9605 NP_003782 15 9605 NP_001095871 15 9605 NP_001252510 15 9605 NP_079391 15 9605 NP_037452 15 9605 NP_001395 15 9605 XP_006722053 15 9605 XP_006722052 15 9605 XP_006721527 15 9605 XP_006721526 15 9605 XP_005256542 15 9605 XP_006720658 15 9605 XP_006720657 15 9605 XP_005254579 15 9605 XP_005254578 15 9605 XP_006720656 15 9605 XP_005262954 15 9605 XP_005262953 15 9605 XP_005262950 15 9605 XP_005246143 15 9605 XP_005246141 15 9605 XP_006712671 15 9605 XP_005246139 15 9605 XP_005245851 15 9605 XP_006710544 15 9605 XP_005245849 15 9605>NP_001243407 Length = 366 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G GARVR A Sbjct: 84 GCGARVRAA 92>NP_997198 Length = 449 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G GARVR A Sbjct: 84 GCGARVRAA 92>NP_001243406 Length = 409 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G GARVR A Sbjct: 84 GCGARVRAA 92>NP_037423 Length = 1443 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSGARVRVA 9 G+GAR RVA Sbjct: 921 GAGARGRVA 929>XP_006716613 Length = 785 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSGARVRVA 9 G+GAR RVA Sbjct: 263 GAGARGRVA 271>XP_006716612 Length = 1365 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSGARVRVA 9 G+GAR RVA Sbjct: 843 GAGARGRVA 851>XP_006716611 Length = 1440 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GSGARVRVA 9 G+GAR RVA Sbjct: 921 GAGARGRVA 929>NP_002735 Length = 592 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 GSG RVR+ Sbjct: 11 GSGGRVRL 18>XP_006710829 Length = 534 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 GSG RVR+ Sbjct: 11 GSGGRVRL 18>XP_006710828 Length = 545 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 GSG RVR+ Sbjct: 11 GSGGRVRL 18>NP_065073 Length = 2177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G G +VRVA Sbjct: 1638 GEGCQVRVA 1646>XP_006715582 Length = 2106 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G G +VRVA Sbjct: 1567 GEGCQVRVA 1575>NP_001275927 Length = 941 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 SG+RVRV Sbjct: 560 SGSRVRV 566>NP_001275928 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 SG+RVRV Sbjct: 563 SGSRVRV 569>NP_057657 Length = 970 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 SG+RVRV Sbjct: 589 SGSRVRV 595>NP_751908 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 +GARVRV Sbjct: 260 AGARVRV 266>NP_751907 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 +GARVRV Sbjct: 255 AGARVRV 261>NP_001123885 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 SG+RVRV Sbjct: 363 SGSRVRV 369>NP_443100 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 GSG R+R A Sbjct: 414 GSGTRLREA 422>NP_001193594 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 GSG R+R A Sbjct: 414 GSGTRLREA 422>NP_001254650 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 +GARVRV Sbjct: 259 AGARVRV 265>NP_653204 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 +GARVRV Sbjct: 254 AGARVRV 260>XP_005259984 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 SG+RVRV Sbjct: 586 SGSRVRV 592>XP_005255156 Length = 376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 +GARVRV Sbjct: 260 AGARVRV 266>XP_006711694 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 GSG R+R A Sbjct: 397 GSGTRLREA 405>XP_005245671 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 GSG R+R A Sbjct: 414 GSGTRLREA 422>NP_079094 Length = 404 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 G G RVR+ Sbjct: 33 GGGGRVRI 40>NP_689991 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 461 GSGARI 466>NP_001026851 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 GSG+R+R Sbjct: 369 GSGSRLR 375>NP_060444 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 284 GSGKEVRV 291>NP_110430 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 303 GSGKEVRV 310>NP_942593 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 140 GSGKEVRV 147>NP_001177195 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 219 GSGKEVRV 226>NP_001177196 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 187 GSGKEVRV 194>NP_001278253 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G G+RVR A Sbjct: 1027 GPGSRVRSA 1035>NP_001677 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GARVRVA 9 GAR RVA Sbjct: 277 GARARVA 283>NP_056022 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 302 GSGARI 307>NP_003782 Length = 1052 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SGARVRVA 9 +GA VRVA Sbjct: 208 TGANVRVA 215>NP_001095871 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 G+GAR+R Sbjct: 70 GTGARLR 76>NP_001252510 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 G+GAR+R Sbjct: 70 GTGARLR 76>NP_079391 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 G+GAR+R Sbjct: 70 GTGARLR 76>NP_037452 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G+G R RVA Sbjct: 646 GTGYRFRVA 654>NP_001395 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SGARVRV 8 SGA+VRV Sbjct: 25 SGAQVRV 31>XP_006722053 Length = 2608 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G G+RVR A Sbjct: 1027 GPGSRVRSA 1035>XP_006722052 Length = 2631 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GSGARVRVA 9 G G+RVR A Sbjct: 1027 GPGSRVRSA 1035>XP_006721527 Length = 253 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 GSG+R+R Sbjct: 222 GSGSRLR 228>XP_006721526 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 GSG+R+R Sbjct: 369 GSGSRLR 375>XP_005256542 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSGARVR 7 GSG+R+R Sbjct: 369 GSGSRLR 375>XP_006720658 Length = 152 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 G+GA VRV Sbjct: 47 GNGAPVRV 54>XP_006720657 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 G+GA VRV Sbjct: 47 GNGAPVRV 54>XP_005254579 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 G+GA VRV Sbjct: 47 GNGAPVRV 54>XP_005254578 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 G+GA VRV Sbjct: 47 GNGAPVRV 54>XP_006720656 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSGARVRV 8 G+GA VRV Sbjct: 47 GNGAPVRV 54>XP_005262954 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 394 GSGARI 399>XP_005262953 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 412 GSGARI 417>XP_005262950 Length = 518 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 461 GSGARI 466>XP_005246143 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 159 GSGKEVRV 166>XP_005246141 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 176 GSGKEVRV 183>XP_006712671 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 236 GSGKEVRV 243>XP_005246139 Length = 624 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GSGARVRV 8 GSG VRV Sbjct: 320 GSGKEVRV 327>XP_005245851 Length = 245 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 149 GSGARI 154>XP_006710544 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 377 GSGARI 382>XP_005245849 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GSGARV 6 GSGAR+ Sbjct: 369 GSGARI 374Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.132 0.355 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 472,200 Number of extensions: 605 Number of successful extensions: 63 Number of sequences better than 10000.0: 63 Number of HSP's gapped: 63 Number of HSP's successfully gapped: 63 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |