Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000258 19 665 NP_001035957 19 665 XP_006721991 19 665 XP_006721990 19 665 XP_006721989 19 665 XP_005258041 19 665 XP_006721988 19 665 XP_006721987 19 665 XP_006721986 19 665 XP_005258040 19 665 XP_006721985 19 665 NP_036597 17 4312 NP_149039 16 5631 NP_001182188 16 5631 NP_061744 16 7355 NP_114478 16 7355 NP_000236 15 9605 NP_001120972 15 9605 NP_001040 15 9605 NP_001129391 15 9605 NP_861450 15 9605 NP_079235 15 9605 NP_055797 15 9605 XP_005267486 15 9605 XP_006720145 15 9605 XP_005267485 15 9605 XP_005267483 15 9605 XP_005267482 15 9605 XP_005267481 15 9605 XP_005267480 15 9605 XP_005267479 15 9605 XP_005267478 15 9605 XP_005267477 15 9605 XP_005266418 15 9605 XP_006719671 15 9605 XP_006719670 15 9605 XP_006716054 15 9605 XP_006716053 15 9605 XP_006716052 15 9605 XP_006716051 15 9605 NP_835462 15 9605 NP_001004460 15 9605>NP_000258 Length = 2818 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1385 GSAMFLRFI 1393>NP_001035957 Length = 2839 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1406 GSAMFLRFI 1414>XP_006721991 Length = 1632 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1416 GSAMFLRFI 1424>XP_006721990 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1416 GSAMFLRFI 1424>XP_006721989 Length = 2823 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1416 GSAMFLRFI 1424>XP_005258041 Length = 2836 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1385 GSAMFLRFI 1393>XP_006721988 Length = 2846 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1395 GSAMFLRFI 1403>XP_006721987 Length = 2849 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1416 GSAMFLRFI 1424>XP_006721986 Length = 2854 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1403 GSAMFLRFI 1411>XP_005258040 Length = 2857 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1406 GSAMFLRFI 1414>XP_006721985 Length = 2867 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSAMFL FI Sbjct: 1416 GSAMFLRFI 1424>NP_036597 Length = 1015 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSAMFLTF 8 GS+MFL F Sbjct: 863 GSSMFLRF 870>NP_149039 Length = 334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 S +FLTFI Sbjct: 109 SILFLTFI 116>NP_001182188 Length = 316 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GSAMFLTF 8 GSA FL+F Sbjct: 31 GSARFLSF 38>NP_061744 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 S +FLTF+ Sbjct: 701 SCVFLTFV 708>NP_114478 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 S +FLTF+ Sbjct: 701 SCVFLTFV 708>NP_000236 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 SA+F TFI Sbjct: 1338 SAIFSTFI 1345>NP_001120972 Length = 1408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 SA+F TFI Sbjct: 1356 SAIFSTFI 1363>NP_001040 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GSAMFLTFI 9 GSA+ ++FI Sbjct: 56 GSAILISFI 64>NP_001129391 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSAMFLT 7 GSA FLT Sbjct: 304 GSASFLT 310>NP_861450 Length = 461 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSAMFLT 7 GSA FLT Sbjct: 304 GSASFLT 310>NP_079235 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AMFLTFI 9 A+FLTF+ Sbjct: 212 AVFLTFL 218>NP_055797 Length = 2341 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1506 GSAIFIT 1512>XP_005267486 Length = 1421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 586 GSAIFIT 592>XP_006720145 Length = 1423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 588 GSAIFIT 594>XP_005267485 Length = 1459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 624 GSAIFIT 630>XP_005267483 Length = 2230 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1395 GSAIFIT 1401>XP_005267482 Length = 2243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1408 GSAIFIT 1414>XP_005267481 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1458 GSAIFIT 1464>XP_005267480 Length = 2336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1501 GSAIFIT 1507>XP_005267479 Length = 2344 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1509 GSAIFIT 1515>XP_005267478 Length = 2348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1513 GSAIFIT 1519>XP_005267477 Length = 2349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GSAMFLT 7 GSA+F+T Sbjct: 1514 GSAIFIT 1520>XP_005266418 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GSAMFLT 7 GSA FLT Sbjct: 304 GSASFLT 310>XP_006719671 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AMFLTFI 9 A+FLTF+ Sbjct: 212 AVFLTFL 218>XP_006719670 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AMFLTFI 9 A+FLTF+ Sbjct: 17 AVFLTFL 23>XP_006716054 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 SA+F TFI Sbjct: 908 SAIFSTFI 915>XP_006716053 Length = 960 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 SA+F TFI Sbjct: 908 SAIFSTFI 915>XP_006716052 Length = 1409 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 SA+F TFI Sbjct: 1357 SAIFSTFI 1364>XP_006716051 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 SA+F TFI Sbjct: 1375 SAIFSTFI 1382>NP_835462 Length = 317 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 S +FLTF+ Sbjct: 26 SLLFLTFL 33>NP_001004460 Length = 303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 SAMFLTFI 9 S +FLTF+ Sbjct: 12 SLLFLTFL 19Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.150 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 289,752 Number of extensions: 441 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |