Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 509 NP_001013725 17 3301 XP_005254450 17 3301 XP_005254449 17 3301 XP_006719746 17 4312 XP_005253685 17 4312 XP_005253684 17 4312 NP_003950 17 4312 NP_055401 16 5631 NP_079239 16 7355 NP_001243000 16 7355 NP_054784 16 7355 NP_001275879 16 7355 NP_060128 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_006720237 16 7355 XP_005267827 16 7355 XP_005267826 16 7355 XP_005249911 16 7355 XP_005249910 16 7355 NP_060290 15 9605 XP_006717224 15 9605 XP_006717223 15 9605 XP_006717222 15 9605 XP_006717221 15 9605 XP_006717220 15 9605 XP_006717219 15 9605 XP_006717218 15 9605 XP_006717217 15 9605 XP_006717216 15 9605 XP_006717215 15 9605 XP_006717214 15 9605 XP_006713481 15 9605 XP_005265642 15 9605 XP_005265641 15 9605 XP_006713480 15 9605 XP_006713479 15 9605 NP_004794 15 9605>NP_004295 Length = 1620 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GRYIAQLL 8 GRYIAQLL Sbjct: 359 GRYIAQLL 366>NP_001013725 Length = 1649 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RY AQLLS Sbjct: 404 RYTAQLLS 411>XP_005254450 Length = 1505 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RY AQLLS Sbjct: 404 RYTAQLLS 411>XP_005254449 Length = 1626 Score = 16.9 bits (32), Expect = 3301 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RY AQLLS Sbjct: 404 RYTAQLLS 411>XP_006719746 Length = 603 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RYIAQL S Sbjct: 367 RYIAQLKS 374>XP_005253685 Length = 1061 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RYIAQL S Sbjct: 372 RYIAQLKS 379>XP_005253684 Length = 1073 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RYIAQL S Sbjct: 384 RYIAQLKS 391>NP_003950 Length = 1068 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RYIAQL S Sbjct: 379 RYIAQLKS 386>NP_055401 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 RYI QL+S Sbjct: 165 RYIRQLIS 172>NP_079239 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRYIAQLLS 9 GR++ QLL+ Sbjct: 402 GRHLCQLLA 410>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRYIAQL 7 GR++AQL Sbjct: 3749 GRFLAQL 3755>NP_054784 Length = 679 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 G Y+ QLLS Sbjct: 552 GMYLNQLLS 560>NP_001275879 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 G Y+ QLLS Sbjct: 552 GMYLNQLLS 560>NP_060128 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RYIAQLLS 9 +Y+AQLL+ Sbjct: 215 KYLAQLLN 222>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRYIAQL 7 GR++AQL Sbjct: 3798 GRFLAQL 3804>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRYIAQL 7 GR++AQL Sbjct: 3798 GRFLAQL 3804>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRYIAQL 7 GR++AQL Sbjct: 3798 GRFLAQL 3804>XP_006720237 Length = 332 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RYIAQLLS 9 +Y+AQLL+ Sbjct: 229 KYLAQLLN 236>XP_005267827 Length = 571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RYIAQLLS 9 +Y+AQLL+ Sbjct: 215 KYLAQLLN 222>XP_005267826 Length = 585 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RYIAQLLS 9 +Y+AQLL+ Sbjct: 229 KYLAQLLN 236>XP_005249911 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRYIAQLLS 9 GR++ QLL+ Sbjct: 402 GRHLCQLLA 410>XP_005249910 Length = 801 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRYIAQLLS 9 GR++ QLL+ Sbjct: 402 GRHLCQLLA 410>NP_060290 Length = 876 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 447 RLVAQLLS 454>XP_006717224 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006717223 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 127 RLVAQLLS 134>XP_006717222 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 127 RLVAQLLS 134>XP_006717221 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006717220 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006717219 Length = 856 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006717218 Length = 877 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 447 RLVAQLLS 454>XP_006717217 Length = 905 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 475 RLVAQLLS 482>XP_006717216 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006717215 Length = 928 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006717214 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RYIAQLLS 9 R +AQLLS Sbjct: 499 RLVAQLLS 506>XP_006713481 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 GRY A LLS Sbjct: 223 GRYPAILLS 231>XP_005265642 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 GRY A LLS Sbjct: 209 GRYPAILLS 217>XP_005265641 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 GRY A LLS Sbjct: 209 GRYPAILLS 217>XP_006713480 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 GRY A LLS Sbjct: 223 GRYPAILLS 231>XP_006713479 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 GRY A LLS Sbjct: 223 GRYPAILLS 231>NP_004794 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRYIAQLLS 9 GRY A LLS Sbjct: 209 GRYPAILLS 217Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.144 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,508 Number of extensions: 525 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |