Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 20 299 XP_005273257 20 299 NP_056240 17 3301 XP_006712046 17 3301 NP_001273700 16 5631 NP_115593 16 5631 NP_942592 16 5631 NP_060217 16 5631 NP_114130 16 5631 NP_065741 16 5631 XP_006723798 16 5631 XP_005267210 16 5631 XP_005265730 16 5631 XP_005265729 16 5631 XP_005265728 16 5631 XP_005265724 16 5631 NP_005870 16 5631 NP_009045 16 7355 NP_001793 16 7355 XP_005276559 16 7355 NP_001129706 16 7355 NP_001129705 16 7355 NP_001121650 15 9605 NP_997064 15 9605 NP_000263 15 9605 NP_057336 15 9605 NP_005021 15 9605 NP_115946 15 9605 NP_690001 15 9605 NP_055990 15 9605 NP_066552 15 9605 NP_001277255 15 9605 NP_001277254 15 9605 NP_001170978 15 9605 NP_065891 15 9605 NP_002677 15 9605 NP_004648 15 9605 XP_006719578 15 9605 XP_006719577 15 9605 XP_006719576 15 9605 XP_006719575 15 9605 XP_006719574 15 9605 XP_006719573 15 9605 XP_005269086 15 9605 XP_006719572 15 9605 XP_006719571 15 9605 XP_005269085 15 9605 XP_006719570 15 9605 XP_006719569 15 9605 XP_006719568 15 9605 XP_006719567 15 9605 XP_005263215 15 9605 XP_005265050 15 9605 XP_005265049 15 9605 XP_006713135 15 9605 XP_006712615 15 9605 XP_005263736 15 9605 XP_005263735 15 9605 XP_005263734 15 9605 XP_005263733 15 9605 XP_005263732 15 9605 XP_006712614 15 9605 XP_006712120 15 9605 XP_005264512 15 9605 XP_005264511 15 9605 XP_006712119 15 9605 XP_005264510 15 9605 XP_006712118 15 9605 XP_005264509 15 9605 XP_005264508 15 9605 XP_006712117 15 9605 XP_005264507 15 9605 XP_005264506 15 9605 NP_071756 15 9605>NP_064450 Length = 1722 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRTLLDKLF 9 GRTLL+KLF Sbjct: 539 GRTLLEKLF 547>XP_005273257 Length = 1726 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRTLLDKLF 9 GRTLL+KLF Sbjct: 539 GRTLLEKLF 547>NP_056240 Length = 1720 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GRTLLDKLF 9 G++L+DKL+ Sbjct: 380 GQSLIDKLY 388>XP_006712046 Length = 1612 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GRTLLDKLF 9 G++L+DKL+ Sbjct: 272 GQSLIDKLY 280>NP_001273700 Length = 2490 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1188 GRVLLDK 1194>NP_115593 Length = 2603 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1301 GRVLLDK 1307>NP_942592 Length = 2352 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1050 GRVLLDK 1056>NP_060217 Length = 2542 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1273 GRVLLDK 1279>NP_114130 Length = 560 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 452 GRTVLDML 459>NP_065741 Length = 2617 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1273 GRVLLDK 1279>XP_006723798 Length = 916 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRTL +KL Sbjct: 81 GRTLAEKL 88>XP_005267210 Length = 464 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 356 GRTVLDML 363>XP_005265730 Length = 1480 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1301 GRVLLDK 1307>XP_005265729 Length = 1543 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1301 GRVLLDK 1307>XP_005265728 Length = 2351 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1049 GRVLLDK 1055>XP_005265724 Length = 2602 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRTLLDK 7 GR LLDK Sbjct: 1300 GRVLLDK 1306>NP_005870 Length = 469 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RTLLDKLF 9 RT+++KLF Sbjct: 56 RTIINKLF 63>NP_009045 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GRTLLDKL 8 G+T+LDK+ Sbjct: 420 GQTVLDKV 427>NP_001793 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRTLLDK 7 G+TLLD+ Sbjct: 35 GKTLLDR 41>XP_005276559 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRTLLDK 7 G+TLLD+ Sbjct: 35 GKTLLDR 41>NP_001129706 Length = 887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRTLLDKLF 9 G+TL +KL+ Sbjct: 33 GKTLQEKLY 41>NP_001129705 Length = 817 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRTLLDKLF 9 G+TL +KL+ Sbjct: 33 GKTLQEKLY 41>NP_001121650 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>NP_997064 Length = 732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>NP_000263 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>NP_057336 Length = 4857 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3940 GRTIPDKI 3947>NP_005021 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RTLLDKL 8 RT++DKL Sbjct: 584 RTMVDKL 590>NP_115946 Length = 1042 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RTLLDKLF 9 +TL++K+F Sbjct: 583 KTLIEKMF 590>NP_690001 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>NP_055990 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTLLDKLF 9 RTLLD+ + Sbjct: 1669 RTLLDRAY 1676>NP_066552 Length = 249 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GRTLLDKLF 9 G T DKLF Sbjct: 161 GETTPDKLF 169>NP_001277255 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RTLLDKLF 9 +TL++K+F Sbjct: 128 KTLIEKMF 135>NP_001277254 Length = 1004 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RTLLDKLF 9 +TL++K+F Sbjct: 583 KTLIEKMF 590>NP_001170978 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GRTLLDKLF 9 G T ++KLF Sbjct: 38 GHTCVEKLF 46>NP_065891 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TLLDKLF 9 TLL KLF Sbjct: 4 TLLQKLF 10>NP_002677 Length = 282 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GRTLLD 6 GRTL+D Sbjct: 72 GRTLID 77>NP_004648 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 60 TLLDKL 65>XP_006719578 Length = 1067 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719577 Length = 1184 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719576 Length = 1199 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719575 Length = 1200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719574 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719573 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_005269086 Length = 1256 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719572 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719571 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_005269085 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719570 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719569 Length = 1283 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719568 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_006719567 Length = 1284 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+LD L Sbjct: 259 GRTVLDIL 266>XP_005263215 Length = 1144 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TLLDKLF 9 TLL KLF Sbjct: 4 TLLQKLF 10>XP_005265050 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTLLDKLF 9 RTLLD+ + Sbjct: 493 RTLLDRAY 500>XP_005265049 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTLLDKLF 9 RTLLD+ + Sbjct: 1635 RTLLDRAY 1642>XP_006713135 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RTLLDKLF 9 RTLLD+ + Sbjct: 1642 RTLLDRAY 1649>XP_006712615 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_005263736 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_005263735 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_005263734 Length = 711 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_005263733 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_005263732 Length = 767 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_006712614 Length = 768 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TLLDKL 8 TLLDKL Sbjct: 87 TLLDKL 92>XP_006712120 Length = 4812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3895 GRTIPDKI 3902>XP_005264512 Length = 4840 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3923 GRTIPDKI 3930>XP_005264511 Length = 4847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3967 GRTIPDKI 3974>XP_006712119 Length = 4851 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3934 GRTIPDKI 3941>XP_005264510 Length = 4861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3944 GRTIPDKI 3951>XP_006712118 Length = 4864 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3947 GRTIPDKI 3954>XP_005264509 Length = 4870 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3953 GRTIPDKI 3960>XP_005264508 Length = 4875 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3958 GRTIPDKI 3965>XP_006712117 Length = 4878 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3961 GRTIPDKI 3968>XP_005264507 Length = 4880 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3963 GRTIPDKI 3970>XP_005264506 Length = 4884 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 GRT+ DK+ Sbjct: 3967 GRTIPDKI 3974>NP_071756 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRTLLDKL 8 G+T +DKL Sbjct: 148 GKTSIDKL 155Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.158 0.455 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 517,756 Number of extensions: 800 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |