Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_073713 20 390 NP_002429 18 1935 NP_116107 16 5631 XP_005264089 16 5631 NP_079291 16 7355 NP_001275949 16 7355 NP_659464 16 7355 NP_005059 16 7355 NP_443202 16 7355 NP_001184256 16 7355 XP_005260713 16 7355 XP_006717810 16 7355 XP_006717809 16 7355 XP_005269730 16 7355 XP_005269729 16 7355 XP_005267157 16 7355 XP_005248961 16 7355 NP_115627 15 9605 NP_006868 15 9605 NP_001138600 15 9605 NP_000947 15 9605 NP_056285 15 9605 NP_663788 15 9605 NP_001106984 15 9605 NP_001106983 15 9605 NP_116205 15 9605 NP_079406 15 9605 NP_002883 15 9605 NP_075377 15 9605 NP_075376 15 9605 NP_060700 15 9605 XP_005259403 15 9605 XP_005259401 15 9605 XP_005268022 15 9605 XP_005268021 15 9605 XP_006720022 15 9605 XP_005254151 15 9605 XP_005254150 15 9605 XP_006720021 15 9605 XP_005254149 15 9605 XP_005254146 15 9605 XP_006720020 15 9605 XP_005254145 15 9605 XP_005254143 15 9605 XP_005254142 15 9605 XP_006718583 15 9605 XP_006718582 15 9605 XP_006717419 15 9605 XP_006715439 15 9605 XP_005264310 15 9605 XP_005264309 15 9605 XP_005264308 15 9605 XP_006712048 15 9605 XP_005270437 15 9605 NP_006408 15 9605 NP_115828 15 9605 NP_001139500 15 9605>NP_073713 Length = 985 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRRSSLMYG 9 GRRSSL YG Sbjct: 36 GRRSSLTYG 44>NP_002429 Length = 1456 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GRRSSLMY 8 GRRSSL Y Sbjct: 1040 GRRSSLSY 1047>NP_116107 Length = 474 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GRRSSLM 7 GRRSSL+ Sbjct: 107 GRRSSLL 113>XP_005264089 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GRRSSLM 7 GRRSSL+ Sbjct: 46 GRRSSLL 52>NP_079291 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 531 RRSPLTYG 538>NP_001275949 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GRRSSLMY 8 G+RSSL++ Sbjct: 538 GKRSSLLH 545>NP_659464 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GRRSSLMY 8 G+RSSL++ Sbjct: 538 GKRSSLLH 545>NP_005059 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSSLMYG 9 RSSL YG Sbjct: 442 RSSLCYG 448>NP_443202 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 537 RRSPLTYG 544>NP_001184256 Length = 685 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 536 RRSPLTYG 543>XP_005260713 Length = 600 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 451 RRSPLTYG 458>XP_006717810 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 547 RRSPLTYG 554>XP_006717809 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 547 RRSPLTYG 554>XP_005269730 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 547 RRSPLTYG 554>XP_005269729 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 RRSSLMYG 9 RRS L YG Sbjct: 548 RRSPLTYG 555>XP_005267157 Length = 766 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 RSSLMYG 9 RSSL YG Sbjct: 442 RSSLCYG 448>XP_005248961 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GRRSSLMY 8 G+RSSL++ Sbjct: 538 GKRSSLLH 545>NP_115627 Length = 1476 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 593 GRRSSL 598>NP_006868 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GRRSSLMYG 9 GR+ L YG Sbjct: 260 GRKLKLFYG 268>NP_001138600 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSSLMY 8 RRS+L+Y Sbjct: 1832 RRSALLY 1838>NP_000947 Length = 358 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 59 GRRSSL 64>NP_056285 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 478 GRRSSL 483>NP_663788 Length = 782 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 736 GRRSSL 741>NP_001106984 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 707 GRRSSL 712>NP_001106983 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 757 GRRSSL 762>NP_116205 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 110 GRRSSL 115>NP_079406 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRRSSLMY 8 GRRS MY Sbjct: 548 GRRSVRMY 555>NP_002883 Length = 1257 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 143 GRRSSL 148>NP_075377 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 143 GRRSSL 148>NP_075376 Length = 1203 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 143 GRRSSL 148>NP_060700 Length = 1156 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 53 GRRSSL 58>XP_005259403 Length = 475 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 110 GRRSSL 115>XP_005259401 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 110 GRRSSL 115>XP_005268022 Length = 1208 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 143 GRRSSL 148>XP_005268021 Length = 1277 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 143 GRRSSL 148>XP_006720022 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 591 GRRSSL 596>XP_005254151 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 591 GRRSSL 596>XP_005254150 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 591 GRRSSL 596>XP_006720021 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 591 GRRSSL 596>XP_005254149 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 591 GRRSSL 596>XP_005254146 Length = 792 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 666 GRRSSL 671>XP_006720020 Length = 798 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 672 GRRSSL 677>XP_005254145 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 676 GRRSSL 681>XP_005254143 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 736 GRRSSL 741>XP_005254142 Length = 874 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 748 GRRSSL 753>XP_006718583 Length = 1482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 515 GRRSSL 520>XP_006718582 Length = 1560 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 593 GRRSSL 598>XP_006717419 Length = 382 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 284 GRRSSL 289>XP_006715439 Length = 1911 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RRSSLMY 8 RRS+L+Y Sbjct: 1832 RRSALLY 1838>XP_005264310 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 478 GRRSSL 483>XP_005264309 Length = 1324 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 478 GRRSSL 483>XP_005264308 Length = 1218 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 478 GRRSSL 483>XP_006712048 Length = 1249 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 478 GRRSSL 483>XP_005270437 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRRSSLMY 8 G+R SL+Y Sbjct: 21 GKRLSLLY 28>NP_006408 Length = 444 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRRSSLMY 8 G+R SL+Y Sbjct: 21 GKRLSLLY 28>NP_115828 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 232 GRRSSL 237>NP_001139500 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRRSSL 6 GRRSSL Sbjct: 232 GRRSSL 237Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.322 0.138 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 367,992 Number of extensions: 467 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |