Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001013433 20 509 NP_060785 20 509 NP_361014 20 509 NP_071750 17 2528 XP_005256148 17 2528 XP_006721307 17 2528 XP_005256144 17 2528 XP_005256143 17 2528 XP_005256142 17 2528 NP_149023 17 4312 XP_005253240 17 4312 XP_006714807 17 4312 XP_006723843 16 5631 XP_006723842 16 5631 XP_006723841 16 5631 XP_006723840 16 5631 NP_055292 16 5631 NP_000588 16 7355 NP_061867 16 7355 NP_001034464 16 7355 NP_077025 16 7355 NP_848599 16 7355 NP_001265424 16 7355 NP_003036 16 7355 NP_057417 16 7355 NP_001660 16 7355 XP_005274573 16 7355 XP_005274572 16 7355 XP_005274571 16 7355 XP_006723684 16 7355 XP_006723683 16 7355 XP_005255284 16 7355 XP_005255283 16 7355 XP_006720936 16 7355 XP_006720935 16 7355 XP_005255282 16 7355 XP_005266564 16 7355 XP_005270192 16 7355 XP_005270168 16 7355 XP_005249398 16 7355 XP_005249397 16 7355 XP_006713081 16 7355 XP_006710761 16 7355 NP_001723 16 7355 NP_001092808 16 7355 NP_803875 16 7355 NP_005116 15 9605 NP_078891 15 9605 NP_001171526 15 9605 NP_001171527 15 9605 NP_001269462 15 9605 NP_002548 15 9605 XP_005260950 15 9605 XP_005260949 15 9605 XP_005260948 15 9605 XP_005260947 15 9605 XP_006720053 15 9605 XP_005272473 15 9605 XP_006720052 15 9605 XP_006720051 15 9605 XP_006720050 15 9605 XP_006720048 15 9605 XP_005272471 15 9605 XP_006720047 15 9605 XP_006720045 15 9605 XP_005248654 15 9605 XP_005248653 15 9605>NP_001013433 Length = 589 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 G QSLTSGM Sbjct: 461 GHQSLTSGM 469>NP_060785 Length = 627 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 G QSLTSGM Sbjct: 499 GHQSLTSGM 507>NP_361014 Length = 707 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 G QSLTSGM Sbjct: 579 GHQSLTSGM 587>NP_071750 Length = 486 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQSLTSG 8 RQSLTSG Sbjct: 436 RQSLTSG 442>XP_005256148 Length = 278 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQSLTSG 8 RQSLTSG Sbjct: 228 RQSLTSG 234>XP_006721307 Length = 370 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQSLTSG 8 RQSLTSG Sbjct: 320 RQSLTSG 326>XP_005256144 Length = 486 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQSLTSG 8 RQSLTSG Sbjct: 436 RQSLTSG 442>XP_005256143 Length = 486 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQSLTSG 8 RQSLTSG Sbjct: 436 RQSLTSG 442>XP_005256142 Length = 486 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 RQSLTSG 8 RQSLTSG Sbjct: 436 RQSLTSG 442>NP_149023 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QS+TSG Sbjct: 350 GSQSITSG 357>XP_005253240 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QS+TSG Sbjct: 350 GSQSITSG 357>XP_006714807 Length = 194 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 GR+ L SGM Sbjct: 103 GREGLQSGM 111>XP_006723843 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRQSLTSG 8 GRQ LT G Sbjct: 158 GRQPLTEG 165>XP_006723842 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRQSLTSG 8 GRQ LT G Sbjct: 158 GRQPLTEG 165>XP_006723841 Length = 274 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRQSLTSG 8 GRQ LT G Sbjct: 158 GRQPLTEG 165>XP_006723840 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRQSLTSG 8 GRQ LT G Sbjct: 165 GRQPLTEG 172>NP_055292 Length = 290 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRQSLTSG 8 GRQ LT G Sbjct: 174 GRQPLTEG 181>NP_000588 Length = 328 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 GR+ L SGM Sbjct: 180 GRKPLKSGM 188>NP_061867 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 589 GSQSLSSG 596>NP_001034464 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR+ +TSG+ Sbjct: 25 GRREVTSGV 33>NP_077025 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR+ +TSG+ Sbjct: 25 GRREVTSGV 33>NP_848599 Length = 3092 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRQSLT 6 GRQSLT Sbjct: 2262 GRQSLT 2267>NP_001265424 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 G QSLT G+ Sbjct: 844 GEQSLTWGL 852>NP_003036 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 GR++LT G Sbjct: 517 GREALTKG 524>NP_057417 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 2471 GSQSLSSG 2478>NP_001660 Length = 593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GRQSLTSGM 9 GR S SGM Sbjct: 99 GRHSFRSGM 107>XP_005274573 Length = 382 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GRQSLTSGM 9 GR S SGM Sbjct: 99 GRHSFRSGM 107>XP_005274572 Length = 475 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GRQSLTSGM 9 GR S SGM Sbjct: 99 GRHSFRSGM 107>XP_005274571 Length = 548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GRQSLTSGM 9 GR S SGM Sbjct: 99 GRHSFRSGM 107>XP_006723684 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR+ +TSG+ Sbjct: 25 GRREVTSGV 33>XP_006723683 Length = 247 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR+ +TSG+ Sbjct: 25 GRREVTSGV 33>XP_005255284 Length = 2581 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 2471 GSQSLSSG 2478>XP_005255283 Length = 2751 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 2471 GSQSLSSG 2478>XP_006720936 Length = 2751 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 2470 GSQSLSSG 2477>XP_006720935 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 2471 GSQSLSSG 2478>XP_005255282 Length = 2752 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 2471 GSQSLSSG 2478>XP_005266564 Length = 629 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 GR++LT G Sbjct: 517 GREALTKG 524>XP_005270192 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 G QSLT G+ Sbjct: 844 GEQSLTWGL 852>XP_005270168 Length = 756 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 G QSLT G+ Sbjct: 722 GEQSLTWGL 730>XP_005249398 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 GR++ TSG Sbjct: 349 GRETFTSG 356>XP_005249397 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 GR++ TSG Sbjct: 349 GRETFTSG 356>XP_006713081 Length = 3964 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRQSLT 6 GRQSLT Sbjct: 2285 GRQSLT 2290>XP_006710761 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QSL+SG Sbjct: 589 GSQSLSSG 596>NP_001723 Length = 526 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 GR++ TSG Sbjct: 349 GRETFTSG 356>NP_001092808 Length = 878 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 G QSLT G+ Sbjct: 844 GEQSLTWGL 852>NP_803875 Length = 4243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GRQSLTSG 8 GRQ TSG Sbjct: 1458 GRQKSTSG 1465>NP_005116 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GRQSLTSGM 9 GRQ++ GM Sbjct: 70 GRQAVLKGM 78>NP_078891 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSLTSGM 9 R SLTSG+ Sbjct: 454 RLSLTSGL 461>NP_001171526 Length = 854 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSLTSGM 9 R SLTSG+ Sbjct: 454 RLSLTSGL 461>NP_001171527 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSLTSGM 9 R SLTSG+ Sbjct: 454 RLSLTSGL 461>NP_001269462 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRQSLTS 7 GR SLTS Sbjct: 220 GRNSLTS 226>NP_002548 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRQSLTSG 8 G QS+T+G Sbjct: 498 GHQSVTTG 505>XP_005260950 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRQSLTS 7 GR SLTS Sbjct: 220 GRNSLTS 226>XP_005260949 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRQSLTS 7 GR SLTS Sbjct: 220 GRNSLTS 226>XP_005260948 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRQSLTS 7 GR SLTS Sbjct: 250 GRNSLTS 256>XP_005260947 Length = 703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRQSLTS 7 GR SLTS Sbjct: 250 GRNSLTS 256>XP_006720053 Length = 164 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_005272473 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_006720052 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_006720051 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_006720050 Length = 195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_006720048 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_005272471 Length = 328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_006720047 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_006720045 Length = 359 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRQSLTSGM 9 GR++LTS + Sbjct: 5 GRKNLTSSL 13>XP_005248654 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSLTSGM 9 R SLTSG+ Sbjct: 207 RLSLTSGL 214>XP_005248653 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RQSLTSGM 9 R SLTSG+ Sbjct: 495 RLSLTSGL 502Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.122 0.319 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 426,125 Number of extensions: 813 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |